PMID: 35566612

Asian Race and Primary Open-Angle Glaucoma: Where Do We Stand?

Journal of clinical medicine
Belamkar, Aditya A, Harris, Alon A, Oddone, Francesco F, Verticchio Vercellin, Alice A, Fabczak-Kubicka, Anna A, Siesky, Brent B
2022-04-28

138 variants were identified in this publication


Variant ID Gene cDNA Protein Consequence Exon Intron
5-110456258-A-G WDR36 c.2137A>G p.I657V Missense 18/23 -
1-171605665-G-C MYOC c.915C>G p.S305R Missense 3/3 -
17-40914650-T-C RAMP2 c.308T>C p.F103S Missense 4/4 -
2-38301757-G-A CYP1B1 c.775C>T p.R259C Missense 2/3 -
19-49564802-C-T NTF4 c.453G>A p.P151= Synonymous 2/2 -
2-38302255-G-A CYP1B1 c.277C>T p.P93S Missense 2/3 -
9-4050113-T-A GLIS3 c.1710+67655A>T - IntronicSNV - 4/10
1-171621389-C-T MYOC c.363G>A p.L121= Synonymous 1/3 -
3-193374988-A-C OPA1 c.2298A>C p.R766= Synonymous 23/31 -
16-8891771-T-C PMM2 c.32T>C p.F11S Missense 1/8 -
1-92193226-A-T TGFBR3 c.875T>A p.L292Q Missense 7/17 -
9-120474703-G-C TLR4 c.297G>C p.Q99H Missense 3/3 -
10-13169776-A-G OPTN c.1274A>G p.E425G Missense 12/15 -
3-193333523-G-A OPA1 c.412G>A p.D138N Missense 3/31 -
5-110439530-G-A WDR36 c.811G>A p.V215I Missense 7/23 -
10-13151239-G-C OPTN c.117G>C p.E39D Missense 3/15 -
9-136661619-T-C VAV2 c.964A>G p.K322E Missense 11/30 -
15-74222202-T-C LOXL1 c.1102+1976T>C - IntronicSNV - 1/6
10-13151239-G-T OPTN c.117G>T p.E39D Missense 3/15 -
2-38298073-A-G CYP1B1 c.1424T>C p.L475P Missense 3/3 -
16-8895749-G-A PMM2 c.160G>A p.E54K Missense 2/8 -
16-8905015-G-A PMM2 c.427G>A p.E143K Missense 5/8 -
6-31545123-TC-CG TNF c.511_512delTCinsCG p.S171R Missense 4/4 -
9-4118501-G-C GLIS3 c.977C>G p.S326C Missense 4/11 -
3-193333555-T-G OPA1 c.444T>G p.D148E Missense 3/31 -
3-193333555-T-A OPA1 c.444T>A p.D148E Missense 3/31 -
17-44803939-CA-TG NSF c.1786_1787delCAinsTG p.Q596W Missense 16/21 -
14-60976547-GC-AA SIX6 c.431_432delGCinsAA p.R144Q Missense 1/2 -
2-38301649-C-T CYP1B1 c.883G>A p.A295T Missense 2/3 -
1-108417547-C-G VAV3 c.297G>C p.L99F Missense 2/27 -
9-136677335-C-T VAV2 c.453G>A p.E151= Synonymous 5/30 -
1-108315367-G-A VAV3 c.545C>T p.A182V Missense 5/27 -
1-108309100-A-C VAV3 c.790T>G p.L264V Missense 8/27 -
1-92193309-CTT-C TGFBR3 c.791_792delAA p.E264Gfs*23 Frameshift 7/17 -
5-36635565-G-T SLC1A3 c.319+5876G>T - IntronicSNV - 3/9
9-120470054-A-G TLR4 c.94-787A>G - IntronicSNV - 1/2
9-120474199-T-G TLR4 c.261-468T>G - IntronicSNV - 2/2
3-193355102-T-A OPA1 c.1035+32T>A - IntronicSNV - 10/30
6-31783507-G-A HSPA1A c.1-27G>A - 5-UTRSNV 1/1 -
6-31783507-G-C HSPA1A c.1-27G>C - 5-UTRSNV 1/1 -
6-31783507-G-T HSPA1A c.1-27G>T - 5-UTRSNV 1/1 -
6-160103084-C-T SOD2 c.*441G>A - 3-UTRSNV 5/5 -
3-193355102-T-C OPA1 c.1035+32T>C - IntronicSNV - 10/30
3-193355074-T-A OPA1 c.1035+4T>A - IntronicSNV - 10/30
3-193355074-T-C OPA1 c.1035+4T>C - IntronicSNV - 10/30
10-69991853-A-G ATOH7 c.1-419T>C - 5-UTRSNV 1/1 -
7-81350208-A-G HGF c.1169-45T>C - IntronicSNV - 9/17
9-120483663-A-G TLR4 c.*6737A>G - IntergenicSNV 3/3 -
9-120485795-A-G TLR4 c.*8869A>G - IntergenicSNV 3/3 -
9-120472730-T-A TLR4 c.260+1723T>A - IntronicSNV - 2/2
9-120472730-T-C TLR4 c.260+1723T>C - IntronicSNV - 2/2
9-120478131-G-C TLR4 c.*1205G>C - 3-UTRSNV 3/3 -
10-69991749-T-G ATOH7 c.1-315A>C - 5-UTRSNV 1/1 -
1-108502412-C-A VAV3 c.204+4876G>T - IntronicSNV - 1/26
9-136720821-G-A VAV2 c.380+5675C>T - IntronicSNV - 3/29
1-171605481-C-T MYOC c.1099G>A p.G367R Missense 3/3 -
1-171605450-G-A MYOC c.1130C>T p.T377M Missense 3/3 -
1-171605471-G-A MYOC c.1109C>T p.P370L Missense 3/3 -
11-34482908-C-T CAT c.1167C>T p.D389= Synonymous 9/13 -
1-171621525-C-T MYOC c.227G>A p.R76K Missense 1/3 -
10-13151224-G-A OPTN c.102G>A p.T34= Synonymous 3/15 -
10-13152400-T-A OPTN c.293T>A p.M98K Missense 4/15 -
20-44640225-A-G MMP9 c.836A>G p.Q279R Missense 6/13 -
19-45854919-T-A ERCC2 c.2251A>T p.K751* Nonsense 23/23 -
3-183696402-A-G ABCC5 c.1185T>C p.A395= Synonymous 9/30 -
2-38302390-G-C CYP1B1 c.142C>G p.R48G Missense 2/3 -
2-38302177-C-A CYP1B1 c.355G>T p.A119S Missense 2/3 -
1-171605271-A-G MYOC c.1309T>C p.Y437H Missense 3/3 -
2-38301954-G-A CYP1B1 c.578C>T p.P193L Missense 2/3 -
2-38301847-C-T CYP1B1 c.685G>A p.E229K Missense 2/3 -
2-38301657-A-T CYP1B1 c.875T>A p.M292K Missense 2/3 -
2-38298394-C-T CYP1B1 c.1103G>A p.R368H Missense 3/3 -
1-171621608-C-A MYOC c.144G>T p.Q48H Missense 1/3 -
10-13174122-A-G OPTN c.1457A>G p.H486R Missense 13/15 -
10-13158319-C-G OPTN c.605C>G p.T202R Missense 6/15 -
2-38298150-A-G CYP1B1 c.1347T>C p.D449= Synonymous 3/3 -
11-119216504-C-T MFRP c.406G>A p.V136M Missense 4/15 -
11-119216231-A-G MFRP c.540T>C p.H180= Synonymous 5/15 -
11-119216279-G-A MFRP c.492C>T p.Y164= Synonymous 5/15 -
11-119216279-G-T MFRP c.492C>A p.Y164* Nonsense 5/15 -
2-38298150-A-T CYP1B1 c.1347T>A p.D449E Missense 3/3 -
1-171621594-A-G MYOC c.158T>C p.V53A Missense 1/3 -
11-119216231-A-C MFRP c.540T>G p.H180Q Missense 5/15 -
1-171605238-T-G MYOC c.1342A>C p.T448P Missense 3/3 -
1-171605501-A-T MYOC c.1079T>A p.I360N Missense 3/3 -
1-171605689-C-A MYOC c.891G>T p.Q297H Missense 3/3 -
1-171605689-C-G MYOC c.891G>C p.Q297H Missense 3/3 -
1-171605493-C-T MYOC c.1087G>A p.A363T Missense 3/3 -
5-110436313-T-A WDR36 c.603T>A p.D145E Missense 5/23 -
1-171621714-G-A MYOC c.38C>T p.P13L Missense 1/3 -
5-110439941-A-G WDR36 c.964A>G p.K266E Missense 8/23 -
6-160099260-T-C SOD2 c.*4265A>G - IntergenicSNV 5/5 -
5-110439509-A-G WDR36 c.790A>G p.I208V Missense 7/23 -
5-110454737-C-T WDR36 c.1991C>T p.S608L Missense 17/23 -
10-13152416-G-C OPTN c.309G>C p.E103D Missense 4/15 -
10-13152416-G-T OPTN c.309G>T p.E103D Missense 4/15 -
22-29451671-A-G ZNRF3 c.*2061A>G - 3-UTRSNV 9/9 -
3-183685534-A-G ABCC5 c.1782T>C p.C594= Synonymous 12/30 -
7-81364187-C-T HGF c.866-5092G>A - IntronicSNV - 7/17
22-29453027-A-G ZNRF3 c.*3417A>G - 3-UTRSNV 9/9 -
22-29453027-A-T ZNRF3 c.*3417A>T - 3-UTRSNV 9/9 -
7-81364435-C-A HGF c.866-5340G>T - IntronicSNV - 7/17
7-81364435-C-G HGF c.866-5340G>C - IntronicSNV - 7/17
7-81364435-C-T HGF c.866-5340G>A - IntronicSNV - 7/17
7-81347548-T-G HGF c.1272-867A>C - IntronicSNV - 10/17
7-116148370-T-C CAV2 c.*2195T>C - 3-UTRSNV 3/3 -
7-116148370-T-G CAV2 c.*2195T>G - 3-UTRSNV 3/3 -
3-183752773-G-A HTR3D c.67-193G>A - IntronicSNV - 1/7
3-183685534-A-T ABCC5 c.1782T>A p.C594* Nonsense 12/30 -
16-8896931-A-C PMM2 c.178+1164A>C - IntronicSNV - 2/7
16-8896931-A-T PMM2 c.178+1164A>T - IntronicSNV - 2/7
22-29450856-C-G ZNRF3 c.*1246C>G - 3-UTRSNV 9/9 -
22-29450856-C-T ZNRF3 c.*1246C>T - 3-UTRSNV 9/9 -
22-29450923-A-G ZNRF3 c.*1313A>G - 3-UTRSNV 9/9 -
3-183678342-C-G ABCC5 c.2380-719G>C - IntronicSNV - 16/29
9-4217028-G-A GLIS3 c.388+69010C>T - IntronicSNV - 2/10
9-4217028-G-C GLIS3 c.388+69010C>G - IntronicSNV - 2/10
19-49564992-G-A NTF4 c.263C>T p.A88V Missense 2/2 -
19-49564917-A-G NTF4 c.338T>C p.L113S Missense 2/2 -
10-13151224-G-T OPTN c.102G>T p.T34= Synonymous 3/15 -
10-13151224-G-C OPTN c.102G>C p.T34= Synonymous 3/15 -
1-171605429-T-C MYOC c.1151A>G p.D384G Missense 3/3 -
14-60976537-C-G SIX6 c.421C>G p.H141D Missense 1/2 -
19-49564785-C-G NTF4 c.470G>C p.G157A Missense 2/2 -
19-49564710-G-A NTF4 c.545C>T p.A182V Missense 2/2 -
1-171605819-G-C MYOC c.761C>G p.P254R Missense 3/3 -
10-13154527-G-A OPTN c.444G>A p.V148= Synonymous 5/15 -
10-13154527-G-C OPTN c.444G>C p.V148= Synonymous 5/15 -
10-13154527-G-T OPTN c.444G>T p.V148= Synonymous 5/15 -
1-171605475-A-G MYOC c.1105T>C p.F369L Missense 3/3 -
5-36678275-T-C SLC1A3 c.860+989T>C - IntronicSNV - 6/9
1-171607845-C-A MYOC c.622G>T p.D208Y Missense 2/3 -
5-36666071-C-T SLC1A3 c.320-5060C>T - IntronicSNV - 3/9
5-36609024-T-C SLC1A3 c.181+318T>C - IntronicSNV - 2/9
5-36646915-A-G SLC1A3 c.319+17226A>G - IntronicSNV - 3/9
1-117297405-AG-CC CD2 c.214_215delAGinsCC p.R72P Missense 2/5 -
1-171609481-T-A MYOC c.605-1619A>T - IntronicSNV - 1/2
1-171609481-T-C MYOC c.605-1619A>G - IntronicSNV - 1/2