Publications:

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Clinical utility of liquid biopsy and integrative genomic profiling in early-stage and oligometastatic cancer patients treated with radiotherapy.

British Journal Of Cancer

Cifuentes, Guadalupe A GA; Santiago, Adrián A; Méndez Blanco, Lucía L; Fueyo, María M; López Martínez, Esther E; Soria, Raquel R; Martín López, Irene I; Cucarella Beltrán, Pepa P; Pardo-Coto, Pablo P; Rodriguez-Rubi, David D; Urquilla, Karla K; Durán, Noelia S NS; Álvarez, Rebeca R; Lago, Claudia G CG; Otero, Andrea A; Diñeiro, Marta M; Capín, Raquel R; Cadiñanos, Juan J; Cabanillas, Rubén R

Publication Date: 2022-12-22

Variant appearance in text: RET: Glu542Lys

PubMed Link: 36550207

Variant Present in the following documents:

• 41416_2022_Article_2102.pdf

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Establishment and application of a method of next generation sequencing of 285 genes in lung cancer based on Ion-Proton platform.

Translational Cancer Research

Chen, Yu Y; Zhang, Xu-Chao XC; Yan, Wen-Qing WQ; Guo, Wei-Bang WB; Xie, Zhi Z; Lu, Dan-Xia DX; Lv, Zhi-Yi ZY; Chen, Zhi-Hong ZH; Su, Jian J

Publication Date: 2020-07

Variant appearance in text: RET: 1624G>A; E542K

PubMed Link: 35117791

Variant Present in the following documents:

• Main text

View BVdb publication page

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Phase II Study of ONC201 in Neuroendocrine Tumors including Pheochromocytoma-Paraganglioma and Desmoplastic Small Round Cell Tumor.

Clinical Cancer Research : An Official Journal Of The American Association For Cancer Research

Anderson, Peter M PM; Trucco, Matteo M MM; Tarapore, Rohinton S RS; Zahler, Stacey S; Thomas, Stefanie S; Gortz, Janette J; Mian, Omar O; Stoignew, Martin M; Prabhu, Varun V; Morrow, Sara S; Allen, Joshua E JE

Publication Date: 2022-05-02

Variant appearance in text: RET: E542K

PubMed Link: 35022321

Variant Present in the following documents:

• Main text
• 1773.pdf

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Identification of Immune-Related Gene Signatures in Lung Adenocarcinoma and Lung Squamous Cell Carcinoma.

Frontiers In Immunology

Li, Na N; Wang, Jiahong J; Zhan, Xianquan X

Publication Date: 2021

Variant appearance in text: RET: 1624G>A; E542K

PubMed Link: 34887858

Variant Present in the following documents:

• Table_4.xlsx, sheet 1

View BVdb publication page

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Genomic profiling reveals heterogeneous populations of ductal carcinoma in situ of the breast.

Communications Biology

Nagasawa, Satoi S; Kuze, Yuta Y; Maeda, Ichiro I; Kojima, Yasuyuki Y; Motoyoshi, Ai A; Onishi, Tatsuya T; Iwatani, Tsuguo T; Yokoe, Takamichi T; Koike, Junki J; Chosokabe, Motohiro M; Kubota, Manabu M; Seino, Hibiki H; Suzuki, Ayako A; Seki, Masahide M; Tsuchihara, Katsuya K; Inoue, Eisuke E; Tsugawa, Koichiro K; Ohta, Tomohiko T; Suzuki, Yutaka Y

Publication Date: 2021-04-01

Variant appearance in text: RET: E542K

PubMed Link: 33795819

Variant Present in the following documents:

• 42003_2021_1959_MOESM10_ESM.xlsx, sheet 1

View BVdb publication page

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The molecular and gene/miRNA expression profiles of radioiodine resistant papillary thyroid cancer.

Journal Of Experimental & Clinical Cancer Research : Cr

Colombo, Carla C; Minna, Emanuela E; Gargiuli, Chiara C; Muzza, Marina M; Dugo, Matteo M; De Cecco, Loris L; Pogliaghi, Gabriele G; Tosi, Delfina D; Bulfamante, Gaetano G; Greco, Angela A; Fugazzola, Laura L; Borrello, Maria Grazia MG

Publication Date: 2020-11-16

Variant appearance in text: RET: E542K

PubMed Link: 33198784

Variant Present in the following documents:

• Main text

View BVdb publication page

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Integrated digital pathology and transcriptome analysis identifies molecular mediators of T-cell exclusion in ovarian cancer.

Nature Communications

Desbois, Mélanie M; Udyavar, Akshata R AR; Ryner, Lisa L; Kozlowski, Cleopatra C; Guan, Yinghui Y; Dürrbaum, Milena M; Lu, Shan S; Fortin, Jean-Philippe JP; Koeppen, Hartmut H; Ziai, James J; Chang, Ching-Wei CW; Keerthivasan, Shilpa S; Plante, Marie M; Bourgon, Richard R; Bais, Carlos C; Hegde, Priti P; Daemen, Anneleen A; Turley, Shannon S; Wang, Yulei Y

Publication Date: 2020-11-04

Variant appearance in text: RET: Glu542Lys

PubMed Link: 33149148

Variant Present in the following documents:

• 41467_2020_19408_MOESM8_ESM.xlsx, sheet 10

View BVdb publication page

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Molecular testing on bronchial washings for the diagnosis and predictive assessment of lung cancer.

Molecular Oncology

Roncarati, Roberta R; Lupini, Laura L; Miotto, Elena E; Saccenti, Elena E; Mascetti, Susanna S; Morandi, Luca L; Bassi, Cristian C; Rasio, Debora D; Callegari, Elisa E; Conti, Valentina V; Rinaldi, Rosa R; Lanza, Giovanni G; Gafà, Roberta R; Papi, Alberto A; Frassoldati, Antonio A; Sabbioni, Silvia S; Ravenna, Franco F; Casoni, Gian L GL; Negrini, Massimo M

Publication Date: 2020-09

Variant appearance in text: RET: E542K

PubMed Link: 32441866

Variant Present in the following documents:

• MOL2-14-2163-s004.xlsx, sheet 1

View BVdb publication page

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FOXE1 regulates migration and invasion in thyroid cancer cells and targets ZEB1.

Endocrine-Related Cancer

Morillo-Bernal, Jesús J; Fernández, Lara P LP; Santisteban, Pilar P

Publication Date: 2020-03

Variant appearance in text: RET: E542K

PubMed Link: 31846430

Variant Present in the following documents:

• Main text

View BVdb publication page

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Phosphoproteomics Enables Molecular Subtyping and Nomination of Kinase Candidates for Individual Patients of Diffuse-Type Gastric Cancer.

Iscience

Tong, Mengsha M; Yu, Chunyu C; Shi, Jinwen J; Huang, Wenwen W; Ge, Sai S; Liu, Mingwei M; Song, Lei L; Zhan, Dongdong D; Xia, Xia X; Liu, Wanlin W; Feng, Jinwen J; Shi, Wenhao W; Ji, Jiafu J; Gao, Jing J; Shi, Tieliu T; Zhu, Weimin W; Ding, Chen C; Wang, Yi Y; He, Fuchu F; Shen, Lin L; Li, Tingting T; Qin, Jun J

Publication Date: 2019-12-20

Variant appearance in text: RET: E542K

PubMed Link: 31751824

Variant Present in the following documents:

• mmc15.xlsx, sheet 2

View BVdb publication page

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Genomic Profiling of Driver Gene Mutations in Chinese Patients With Non-Small Cell Lung Cancer.

Frontiers In Genetics

Meng, Hongxue H; Guo, Xuejie X; Sun, Dawei D; Liang, Yuebin Y; Lang, Jidong J; Han, Yingmin Y; Lu, Qingqing Q; Zhang, Yanxiang Y; An, Yanxin Y; Tian, Geng G; Yuan, Dawei D; Xu, Shidong S; Geng, Jingshu J

Publication Date: 2019

Variant appearance in text: RET: E542K

PubMed Link: 31749831

Variant Present in the following documents:

• fgene-10-01008.pdf

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Blood-based monitoring identifies acquired and targetable driver HER2 mutations in endocrine-resistant metastatic breast cancer.

Npj Precision Oncology

Medford, Arielle J AJ; Dubash, Taronish D TD; Juric, Dejan D; Spring, Laura L; Niemierko, Andrzej A; Vidula, Neelima N; Peppercorn, Jeffrey J; Isakoff, Steven S; Reeves, Brittany A BA; LiCausi, Joseph A JA; Wesley, Benjamin B; Malvarosa, Giuliana G; Yuen, Megan M; Wittner, Ben S BS; Lawrence, Michael S MS; Iafrate, A John AJ; Ellisen, Leif L; Moy, Beverly B; Toner, Mehmet M; Maheswaran, Shyamala S; Haber, Daniel A DA; Bardia, Aditya A

Publication Date: 2019

Variant appearance in text: RET: E542K

PubMed Link: 31341951

Variant Present in the following documents:

• 41698_2019_Article_90.pdf

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Segmental epidermal nevus and mucosal neuromas associated with PIK3CA-related overgrowth spectrum disorder.

Jaad Case Reports

Roth, Gretchen M GM; Ferguson, Nkanyezi N; Wanat, Karolyn A KA

Publication Date: 2018-11

Variant appearance in text: RET: E542K

PubMed Link: 30511004

Variant Present in the following documents:

• main.pdf

View BVdb publication page

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Investigation of targetable predictive and prognostic markers in gallbladder carcinoma.

Journal Of Gastrointestinal Oncology

Neyaz, Azfar A; Husain, Nuzhat N; Gupta, Sameer S; Kumari, Swati S; Arora, Aditi A; Awasthi, Namrata Puneet NP; Malhotra, Kiran Preet KP; Misra, Sanjeev S

Publication Date: 2018-02

Variant appearance in text: RET: 1624G>A; Glu542Lys

PubMed Link: 29564177

Variant Present in the following documents:

• Main text

View BVdb publication page

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A novel molecular diagnostics platform for somatic and germline precision oncology.

Molecular Genetics & Genomic Medicine

Cabanillas, Rubén R; Diñeiro, Marta M; Castillo, David D; Pruneda, Patricia C PC; Penas, Cristina C; Cifuentes, Guadalupe A GA; de Vicente, Álvaro Á; Durán, Noelia S NS; Álvarez, Rebeca R; Ordóñez, Gonzalo R GR; Cadiñanos, Juan J

Publication Date: 2017-07

Variant appearance in text: RET: 1624G>A; E542K

PubMed Link: 28717660

Variant Present in the following documents:

• Main text
• MGG3-5-336.pdf

View BVdb publication page

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New frontiers in the treatment of colorectal cancer: Autophagy and the unfolded protein response as promising targets.

Autophagy

Mokarram, Pooneh P; Albokashy, Mohammed M; Zarghooni, Maryam M; Moosavi, Mohammad Amin MA; Sepehri, Zahra Z; Chen, Qi Min QM; Hudecki, Andrzej A; Sargazi, Aliyeh A; Alizadeh, Javad J; Moghadam, Adel Rezaei AR; Hashemi, Mohammad M; Movassagh, Hesam H; Klonisch, Thomas T; Owji, Ali Akbar AA; Łos, Marek J MJ; Ghavami, Saeid S

Publication Date: 2017-05-04

Variant appearance in text: RET: E542K

PubMed Link: 28358273

Variant Present in the following documents:

• Main text

View BVdb publication page

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TumorNext: A comprehensive tumor profiling assay that incorporates high resolution copy number analysis and germline status to improve testing accuracy.

Oncotarget

Gray, Phillip N PN; Vuong, Huy H; Tsai, Pei P; Lu, Hsaio-Mei HM; Mu, Wenbo W; Hsuan, Vickie V; Hoo, Jayne J; Shah, Swati S; Uyeda, Lisa L; Fox, Susanne S; Patel, Harshil H; Janicek, Mike M; Brown, Sandra S; Dobrea, Lavinia L; Wagman, Lawrence L; Plimack, Elizabeth E; Mehra, Ranee R; Golemis, Erica A EA; Bilusic, Marijo M; Zibelman, Matthew M; Elliott, Aaron A

Publication Date: 2016-10-18

Variant appearance in text: RET: E542K

PubMed Link: 27626691

Variant Present in the following documents:

• oncotarget-07-68206.pdf

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miR-199a-3p displays tumor suppressor functions in papillary thyroid carcinoma.

Oncotarget

Minna, Emanuela E; Romeo, Paola P; De Cecco, Loris L; Dugo, Matteo M; Cassinelli, Giuliana G; Pilotti, Silvana S; Degl'Innocenti, Debora D; Lanzi, Cinzia C; Casalini, Patrizia P; Pierotti, Marco A MA; Greco, Angela A; Borrello, Maria Grazia MG

Publication Date: 2014-05-15

Variant appearance in text: RET: E542K

PubMed Link: 24810336

Variant Present in the following documents:

• Main text
• oncotarget-05-2513.pdf

View BVdb publication page

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Liposarcoma: molecular genetics and therapeutics.

Sarcoma

Conyers, Rachel R; Young, Sophie S; Thomas, David M DM

Publication Date: 2011

Variant appearance in text: RET: E542K

PubMed Link: 21253554

Variant Present in the following documents:

• SRCM2011-483154.pdf

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Activating mutations in FGFR3 and HRAS reveal a shared genetic origin for congenital disorders and testicular tumors.

Nature Genetics

Goriely, Anne A; Hansen, Ruth M S RM; Taylor, Indira B IB; Olesen, Inge A IA; Jacobsen, Grete Krag GK; McGowan, Simon J SJ; Pfeifer, Susanne P SP; McVean, Gilean A T GA; Rajpert-De Meyts, Ewa E; Wilkie, Andrew O M AO

Publication Date: 2009-11

Variant appearance in text: RET: E542K

PubMed Link: 19855393

Variant Present in the following documents:

• NIHMS27834-supplement-2.xls, sheet 1

View BVdb publication page

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