Publications:

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Analysis of single-nucleotide polymorphisms in genes associated with triple-negative breast cancer.

Frontiers In Genetics

G, Vigneshwaran V; Hasan, Qurratulain Annie QA; Kumar, Rahul R; Eranki, Avinash A

Publication Date: 2022

Variant appearance in text: rs572685299

PubMed Link: 36561320

Variant Present in the following documents:

• Table2.xlsx, sheet 6

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Interaction between S4 and the phosphatase domain mediates electrochemical coupling in voltage-sensing phosphatase (VSP).

Proceedings Of The National Academy Of Sciences Of The United States Of America

Mizutani, Natsuki N; Kawanabe, Akira A; Jinno, Yuka Y; Narita, Hirotaka H; Yonezawa, Tomoko T; Nakagawa, Atsushi A; Okamura, Yasushi Y

Publication Date: 2022-06-28

Variant appearance in text: PTEN: S10G

PubMed Link: 35733115

Variant Present in the following documents:

• pnas.202200364.pdf

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Phasing analysis of lung cancer genomes using a long read sequencer.

Nature Communications

Sakamoto, Yoshitaka Y; Miyake, Shuhei S; Oka, Miho M; Kanai, Akinori A; Kawai, Yosuke Y; Nagasawa, Satoi S; Shiraishi, Yuichi Y; Tokunaga, Katsushi K; Kohno, Takashi T; Seki, Masahide M; Suzuki, Yutaka Y; Suzuki, Ayako A

Publication Date: 2022-06-16

Variant appearance in text: PTEN: S10g

PubMed Link: 35710642

Variant Present in the following documents:

• 41467_2022_31133_MOESM2_ESM.pdf

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KLF3 and PAX6 are candidate driver genes in late-stage, MSI-hypermutated endometrioid endometrial carcinomas.

Plos One

Rudd, Meghan L ML; Hansen, Nancy F NF; Zhang, Xiaolu X; Urick, Mary Ellen ME; Zhang, Suiyuan S; Merino, Maria J MJ; , ; Mullikin, James C JC; Brody, Lawrence C LC; Bell, Daphne W DW

Publication Date: 2022

Variant appearance in text: rs572685299

PubMed Link: 35081118

Variant Present in the following documents:

• pone.0251286.s005.xlsx, sheet 8

View BVdb publication page

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KLF3 and PAX6 are candidate driver genes in late-stage, MSI-hypermutated endometrioid endometrial carcinomas.

Plos One

Rudd, Meghan L ML; Hansen, Nancy F NF; Zhang, Xiaolu X; Urick, Mary Ellen ME; Zhang, Suiyuan S; Merino, Maria J MJ; , ; Mullikin, James C JC; Brody, Lawrence C LC; Bell, Daphne W DW

Publication Date: 2022

Variant appearance in text: rs572685299

PubMed Link: 35081118

Variant Present in the following documents:

• pone.0251286.s005.xlsx, sheet 8

View BVdb publication page

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The Predictive Value of Monocytes in Immune Microenvironment and Prognosis of Glioma Patients Based on Machine Learning.

Frontiers In Immunology

Zhang, Nan N; Dai, Ziyu Z; Wu, Wantao W; Wang, Zeyu Z; Cao, Hui H; Zhang, Yakun Y; Wang, Zhanchao Z; Zhang, Hao H; Cheng, Quan Q

Publication Date: 2021

Variant appearance in text: PTEN: S10G

PubMed Link: 33959130

Variant Present in the following documents:

• Main text

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Somatic Tissue Engineering in Mouse Models Reveals an Actionable Role for WNT Pathway Alterations in Prostate Cancer Metastasis.

Cancer Discovery

Leibold, Josef J; Ruscetti, Marcus M; Cao, Zhen Z; Ho, Yu-Jui YJ; Baslan, Timour T; Zou, Min M; Abida, Wassim W; Feucht, Judith J; Han, Teng T; Barriga, Francisco M FM; Tsanov, Kaloyan M KM; Zamechek, Leah L; Kulick, Amanda A; Amor, Corina C; Tian, Sha S; Rybczyk, Katarzyna K; Salgado, Nelson R NR; Sánchez-Rivera, Francisco J FJ; Watson, Philip A PA; de Stanchina, Elisa E; Wilkinson, John E JE; Dow, Lukas E LE; Abate-Shen, Cory C; Sawyers, Charles L CL; Lowe, Scott W SW

Publication Date: 2020-07

Variant appearance in text: PTEN: S10G

PubMed Link: 32376773

Variant Present in the following documents:

• Main text

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MERTK mediated novel site Akt phosphorylation alleviates SAV1 suppression.

Nature Communications

Jiang, Yao Y; Zhang, Yanqiong Y; Leung, Janet Y JY; Fan, Cheng C; Popov, Konstantin I KI; Su, Siyuan S; Qian, Jiayi J; Wang, Xiaodong X; Holtzhausen, Alisha A; Ubil, Eric E; Xiang, Yang Y; Davis, Ian I; Dokholyan, Nikolay V NV; Wu, Gang G; Perou, Charles M CM; Kim, William Y WY; Earp, H Shelton HS; Liu, Pengda P

Publication Date: 2019-04-03

Variant appearance in text: PTEN: S10g

PubMed Link: 30944303

Variant Present in the following documents:

• 41467_2019_9233_MOESM1_ESM.pdf

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Akt2 causes TGFβ-induced deptor downregulation facilitating mTOR to drive podocyte hypertrophy and matrix protein expression.

Plos One

Das, Falguni F; Ghosh-Choudhury, Nandini N; Lee, Doug Yoon DY; Gorin, Yves Y; Kasinath, Balakuntalam S BS; Choudhury, Goutam Ghosh GG

Publication Date: 2018

Variant appearance in text: PTEN: S10G

PubMed Link: 30444896

Variant Present in the following documents:

• Main text

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A negative genetic interaction map in isogenic cancer cell lines reveals cancer cell vulnerabilities.

Molecular Systems Biology

Vizeacoumar, Franco J FJ; Arnold, Roland R; Vizeacoumar, Frederick S FS; Chandrashekhar, Megha M; Buzina, Alla A; Young, Jordan T F JT; Kwan, Julian H M JH; Sayad, Azin A; Mero, Patricia P; Lawo, Steffen S; Tanaka, Hiromasa H; Brown, Kevin R KR; Baryshnikova, Anastasia A; Mak, Anthony B AB; Fedyshyn, Yaroslav Y; Wang, Yadong Y; Brito, Glauber C GC; Kasimer, Dahlia D; Makhnevych, Taras T; Ketela, Troy T; Datti, Alessandro A; Babu, Mohan M; Emili, Andrew A; Pelletier, Laurence L; Wrana, Jeff J; Wainberg, Zev Z; Kim, Philip M PM; Rottapel, Robert R; O'Brien, Catherine A CA; Andrews, Brenda B; Boone, Charles C; Moffat, Jason J

Publication Date: 2013-10-08

Variant appearance in text: PTEN: S10G

PubMed Link: 24104479

Variant Present in the following documents:

• Main text
• msb201354.pdf

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