Beyond Structural Bioinformatics for Genomics with Dynamics Characterization of an Expanded KRAS Mutational Landscape.
Biorxiv : The Preprint Server For Biology
Ratnasinghe, Brian D BD; Haque, Neshatul N; Wagenknecht, Jessica B JB; Jensen, Davin R DR; Esparza, Guadalupe V GV; Leverence, Elise N EN; De Assuncao, Thiago Milech TM; Mathison, Angela J AJ; Lomberk, Gwen G; Smith, Brian C BC; Volkman, Brian F BF; Urrutia, Raul R; Zimmermann, Michael T MT
Tracking early lung cancer metastatic dissemination in TRACERx using ctDNA.
Nature
Abbosh, Christopher C; Frankell, Alexander M AM; Harrison, Thomas T; Kisistok, Judit J; Garnett, Aaron A; Johnson, Laura L; Veeriah, Selvaraju S; Moreau, Mike M; Chesh, Adrian A; Chaunzwa, Tafadzwa L TL; Weiss, Jakob J; Schroeder, Morgan R MR; Ward, Sophia S; Grigoriadis, Kristiana K; Shahpurwalla, Aamir A; Litchfield, Kevin K; Puttick, Clare C; Biswas, Dhruva D; Karasaki, Takahiro T; Black, James R M JRM; Martínez-Ruiz, Carlos C; Bakir, Maise Al MA; Pich, Oriol O; Watkins, Thomas B K TBK; Lim, Emilia L EL; Huebner, Ariana A; Moore, David A DA; Godin-Heymann, Nadia N; L'Hernault, Anne A; Bye, Hannah H; Odell, Aaron A; Roberts, Paula P; Gomes, Fabio F; Patel, Akshay J AJ; Manzano, Elizabeth E; Hiley, Crispin T CT; Carey, Nicolas N; Riley, Joan J; Cook, Daniel E DE; Hodgson, Darren D; Stetson, Daniel D; Barrett, J Carl JC; Kortlever, Roderik M RM; Evan, Gerard I GI; Hackshaw, Allan A; Daber, Robert D RD; Shaw, Jacqui A JA; Aerts, Hugo J W L HJWL; Licon, Abel A; Stahl, Josh J; Jamal-Hanjani, Mariam M; , ; Birkbak, Nicolai J NJ; McGranahan, Nicholas N; Swanton, Charles C
Non-Oncogene Addiction of KRAS-Mutant Cancers to IL-1β via Versican and Mononuclear IKKβ.
Cancers
Spella, Magda M; Ntaliarda, Giannoula G; Skiadas, Georgios G; Lamort, Anne-Sophie AS; Vreka, Malamati M; Marazioti, Antonia A; Lilis, Ioannis I; Bouloukou, Eleni E; Giotopoulou, Georgia A GA; Pepe, Mario A A MAA; Weiss, Stefanie A I SAI; Petrera, Agnese A; Hauck, Stefanie M SM; Koch, Ina I; Lindner, Michael M; Hatz, Rudolph A RA; Behr, Juergen J; Arendt, Kristina A M KAM; Giopanou, Ioanna I; Brunn, David D; Savai, Rajkumar R; Jenne, Dieter E DE; de Château, Maarten M; Yull, Fiona E FE; Blackwell, Timothy S TS; Stathopoulos, Georgios T GT
Multiomic neuropathology improves diagnostic accuracy in pediatric neuro-oncology.
Nature Medicine
Sturm, Dominik D; Capper, David D; Andreiuolo, Felipe F; Gessi, Marco M; Kölsche, Christian C; Reinhardt, Annekathrin A; Sievers, Philipp P; Wefers, Annika K AK; Ebrahimi, Azadeh A; Suwala, Abigail K AK; Gielen, Gerrit H GH; Sill, Martin M; Schrimpf, Daniel D; Stichel, Damian D; Hovestadt, Volker V; Daenekas, Bjarne B; Rode, Agata A; Hamelmann, Stefan S; Previti, Christopher C; Jäger, Natalie N; Buchhalter, Ivo I; Blattner-Johnson, Mirjam M; Jones, Barbara C BC; Warmuth-Metz, Monika M; Bison, Brigitte B; Grund, Kerstin K; Sutter, Christian C; Hirsch, Steffen S; Dikow, Nicola N; Hasselblatt, Martin M; Schüller, Ulrich U; Gerber, Nicolas U NU; White, Christine L CL; Buntine, Molly K MK; Kinross, Kathryn K; Algar, Elizabeth M EM; Hansford, Jordan R JR; Gottardo, Nicholas G NG; Hernáiz Driever, Pablo P; Gnekow, Astrid A; Witt, Olaf O; Müller, Hermann L HL; Calaminus, Gabriele G; Fleischhack, Gudrun G; Kordes, Uwe U; Mynarek, Martin M; Rutkowski, Stefan S; Frühwald, Michael C MC; Kramm, Christof M CM; von Deimling, Andreas A; Pietsch, Torsten T; Sahm, Felix F; Pfister, Stefan M SM; Jones, David T W DTW
Discovery of decreased ferroptosis in male colorectal cancer patients with KRAS mutations.
Biorxiv : The Preprint Server For Biology
Yan, Hong H; Talty, Ronan R; Jain, Abhishek A; Cai, Yuping Y; Zheng, Jie J; Shen, Xinyi X; Muca, Engjel E; Paty, Philip B PB; Bosenberg, Marcus W MW; Khan, Sajid A SA; Johnson, Caroline H CH
KRAS, NRAS, BRAF, HER2 and MSI Status in a Large Consecutive Series of Colorectal Carcinomas.
International Journal Of Molecular Sciences
Martianov, Aleksandr S AS; Mitiushkina, Natalia V NV; Ershova, Anastasia N AN; Martynenko, Darya E DE; Bubnov, Mikhail G MG; Amankwah, Priscilla P; Yanus, Grigory A GA; Aleksakhina, Svetlana N SN; Tiurin, Vladislav I VI; Venina, Aigul R AR; Anuskina, Aleksandra A AA; Gorgul, Yuliy A YA; Shestakova, Anna D AD; Maidin, Mikhail A MA; Belyaev, Alexey M AM; Baboshkina, Liliya S LS; Iyevleva, Aglaya G AG; Imyanitov, Evgeny N EN
Network expansion of genetic associations defines a pleiotropy map of human cell biology.
Nature Genetics
Barrio-Hernandez, Inigo I; Schwartzentruber, Jeremy J; Shrivastava, Anjali A; Del-Toro, Noemi N; Gonzalez, Asier A; Zhang, Qian Q; Mountjoy, Edward E; Suveges, Daniel D; Ochoa, David D; Ghoussaini, Maya M; Bradley, Glyn G; Hermjakob, Henning H; Orchard, Sandra S; Dunham, Ian I; Anderson, Carl A CA; Porras, Pablo P; Beltrao, Pedro P
Comprehensive pan-cancer genomic landscape of KRAS altered cancers and real-world outcomes in solid tumors.
Npj Precision Oncology
Lee, Jessica K JK; Sivakumar, Smruthy S; Schrock, Alexa B AB; Madison, Russell R; Fabrizio, David D; Gjoerup, Ole O; Ross, Jeffrey S JS; Frampton, Garrett M GM; Napalkov, Pavel P; Montesion, Meagan M; Schutzman, Jennifer L JL; Ye, Xin X; Hegde, Priti S PS; Nagasaka, Misako M; Oxnard, Geoffrey R GR; Sokol, Ethan S ES; Ou, Sai-Hong Ignatius SI; Shi, Zhen Z
Inflammatory bone marrow signaling in pediatric acute myeloid leukemia distinguishes patients with poor outcomes.
Nature Communications
Bolouri, Hamid H; Ries, Rhonda E RE; Wiedeman, Alice E AE; Hylkema, Tiffany T; Scheiding, Sheila S; Gersuk, Vivian H VH; O'Brien, Kimberly K; Nguyen, Quynh-Anh QA; Smith, Jenny L JL; Alice Long, S S; Meshinchi, Soheil S
A Genomically and Clinically Annotated Patient-Derived Xenograft Resource for Preclinical Research in Non-Small Cell Lung Cancer.
Cancer Research
Woo, Xing Yi XY; Srivastava, Anuj A; Mack, Philip C PC; Graber, Joel H JH; Sanderson, Brian J BJ; Lloyd, Michael W MW; Chen, Mandy M; Domanskyi, Sergii S; Gandour-Edwards, Regina R; Tsai, Rebekah A RA; Keck, James J; Cheng, Mingshan M; Bundy, Margaret M; Jocoy, Emily L EL; Riess, Jonathan W JW; Holland, William W; Grubb, Stephen C SC; Peterson, James G JG; Stafford, Grace A GA; Paisie, Carolyn C; Neuhauser, Steven B SB; Karuturi, R Krishna Murthy RKM; George, Joshy J; Simons, Allen K AK; Chavaree, Margaret M; Tepper, Clifford G CG; Goodwin, Neal N; Airhart, Susan D SD; Lara, Primo N PN; Openshaw, Thomas H TH; Liu, Edison T ET; Gandara, David R DR; Bult, Carol J CJ
Patient Derived Organoids Confirm That PI3K/AKT Signalling Is an Escape Pathway for Radioresistance and a Target for Therapy in Rectal Cancer.
Frontiers In Oncology
Wanigasooriya, Kasun K; Barros-Silva, Joao D JD; Tee, Louise L; El-Asrag, Mohammed E ME; Stodolna, Agata A; Pickles, Oliver J OJ; Stockton, Joanne J; Bryer, Claire C; Hoare, Rachel R; Whalley, Celina M CM; Tyler, Robert R; Sillo, Toritseju T; Yau, Christopher C; Ismail, Tariq T; Beggs, Andrew D AD
Somatic targeted mutation profiling of colorectal cancer precursor lesions.
Bmc Medical Genomics
Dos Santos, Wellington W; Dos Reis, Mariana Bisarro MB; Porto, Jun J; de Carvalho, Ana Carolina AC; Matsushita, Marcus M; Oliveira, Gabriela G; Syrjänen, Kari K; Reis, Rui Manuel RM; Guimarães, Denise Peixoto DP
Publication Date: 2022-06-28
Variant appearance in text: KRAS: G13R; rs121913535
Preclinical Models for Acquired Resistance to Third-Generation EGFR Inhibitors in NSCLC: Functional Studies and Drug Combinations Used to Overcome Resistance.
Frontiers In Oncology
Mahfoudhi, Emna E; Ricordel, Charles C; Lecuyer, Gwendoline G; Mouric, Cécile C; Lena, Hervé H; Pedeux, Rémy R
Custom multi‑tumor next‑generation sequencing panel for routine molecular diagnosis of solid tumors: Validation and results from three‑year clinical use.
International Journal Of Molecular Medicine
Chevrier, Sandy S; Brasselet, Astrid A; Carnet, Marion M; Chevriaux, Angélique A; Gibeaud, Anne A; Jourdain, Marine M; Mananet, Hugo H; Truntzer, Caroline C; Beltjens, Françoise F; Charon-Barra, Céline C; Arnould, Laurent L; Albuisson, Juliette J; Comte, Anthony A; Derangère, Valentin V; Goussot, Vincent V; Boidot, Romain R
Syringocystadenocarcinoma Papilliferum in a Fifteen-Year-Old Girl: A Case Report and Review of the Literature.
Case Reports In Dermatological Medicine
Halsey, Jordan N JN; Faith, Esteban Fernandez EF; Logan, Suzanna J SJ; Shenoy, Archana A; Schieffer, Kathleen M KM; Cottrell, Catherine E CE; Lillis, Anna P AP; Aldrink, Jennifer H JH; Setty, Bhuvana A BA; Pearson, Gregory D GD
KLF3 and PAX6 are candidate driver genes in late-stage, MSI-hypermutated endometrioid endometrial carcinomas.
Plos One
Rudd, Meghan L ML; Hansen, Nancy F NF; Zhang, Xiaolu X; Urick, Mary Ellen ME; Zhang, Suiyuan S; Merino, Maria J MJ; , ; Mullikin, James C JC; Brody, Lawrence C LC; Bell, Daphne W DW
KLF3 and PAX6 are candidate driver genes in late-stage, MSI-hypermutated endometrioid endometrial carcinomas.
Plos One
Rudd, Meghan L ML; Hansen, Nancy F NF; Zhang, Xiaolu X; Urick, Mary Ellen ME; Zhang, Suiyuan S; Merino, Maria J MJ; , ; Mullikin, James C JC; Brody, Lawrence C LC; Bell, Daphne W DW
Targeted Therapy of Papillary Thyroid Cancer: A Comprehensive Genomic Analysis.
Frontiers In Endocrinology
Hescheler, Daniel A DA; Riemann, Burkhard B; Hartmann, Milan J M MJM; Michel, Maximilian M; Faust, Michael M; Bruns, Christiane J CJ; Alakus, Hakan H; Chiapponi, Costanza C
Lentiviral-Driven Discovery of Cancer Drug Resistance Mutations.
Cancer Research
Yenerall, Paul P; Kollipara, Rahul K RK; Avila, Kimberley K; Peyton, Michael M; Eide, Christopher A CA; Bottomly, Daniel D; McWeeney, Shannon K SK; Liu, Yan Y; Westover, Kenneth D KD; Druker, Brian J BJ; Minna, John D JD; Kittler, Ralf R
Lentiviral-Driven Discovery of Cancer Drug Resistance Mutations.
Cancer Research
Yenerall, Paul P; Kollipara, Rahul K RK; Avila, Kimberley K; Peyton, Michael M; Eide, Christopher A CA; Bottomly, Daniel D; McWeeney, Shannon K SK; Liu, Yan Y; Westover, Kenneth D KD; Druker, Brian J BJ; Minna, John D JD; Kittler, Ralf R
Identification and Validation of T-cell Receptors Targeting RAS Hotspot Mutations in Human Cancers for Use in Cell-based Immunotherapy.
Clinical Cancer Research : An Official Journal Of The American Association For Cancer Research
Levin, Noam N; Paria, Biman C BC; Vale, Nolan R NR; Yossef, Rami R; Lowery, Frank J FJ; Parkhurst, Maria R MR; Yu, Zhiya Z; Florentin, Maria M; Cafri, Gal G; Gartner, Jared J JJ; Shindorf, Mackenzie L ML; Ngo, Lien T LT; Ray, Satyajit S; Kim, Sanghyun P SP; Copeland, Amy R AR; Robbins, Paul F PF; Rosenberg, Steven A SA
Identification and Validation of T-cell Receptors Targeting RAS Hotspot Mutations in Human Cancers for Use in Cell-based Immunotherapy.
Clinical Cancer Research : An Official Journal Of The American Association For Cancer Research
Levin, Noam N; Paria, Biman C BC; Vale, Nolan R NR; Yossef, Rami R; Lowery, Frank J FJ; Parkhurst, Maria R MR; Yu, Zhiya Z; Florentin, Maria M; Cafri, Gal G; Gartner, Jared J JJ; Shindorf, Mackenzie L ML; Ngo, Lien T LT; Ray, Satyajit S; Kim, Sanghyun P SP; Copeland, Amy R AR; Robbins, Paul F PF; Rosenberg, Steven A SA
Genomic Classification and Clinical Outcome in Rhabdomyosarcoma: A Report From an International Consortium.
Journal Of Clinical Oncology : Official Journal Of The American Society Of Clinical Oncology
Shern, Jack F JF; Selfe, Joanna J; Izquierdo, Elisa E; Patidar, Rajesh R; Chou, Hsien-Chao HC; Song, Young K YK; Yohe, Marielle E ME; Sindiri, Sivasish S; Wei, Jun J; Wen, Xinyu X; Rudzinski, Erin R ER; Barkauskas, Donald A DA; Lo, Tammy T; Hall, David D; Linardic, Corinne M CM; Hughes, Debbie D; Jamal, Sabri S; Jenney, Meriel M; Chisholm, Julia J; Brown, Rebecca R; Jones, Kristine K; Hicks, Belynda B; Angelini, Paola P; George, Sally S; Chesler, Louis L; Hubank, Michael M; Kelsey, Anna A; Gatz, Susanne A SA; Skapek, Stephen X SX; Hawkins, Douglas S DS; Shipley, Janet M JM; Khan, Javed J
Mutation status and prognostic value of KRAS and NRAS mutations in Moroccan colon cancer patients: A first report.
Plos One
El Agy, Fatima F; El Bardai, Sanae S; El Otmani, Ihsane I; Benbrahim, Zineb Z; Karim, Ibn Majdoub Hassani MH; Mazaz, Khalid K; Benjelloun, El Bachir EB; Ousadden, Abdelmalek A; El Abkari, Mohammed M; Ibrahimi, Sidi Adil SA; Chbani, Laila L