Publications:

SMAP is a pipeline for sample matching in proteogenomics.

Nature Communications

Li, Ling L; Niu, Mingming M; Erickson, Alyssa A; Luo, Jie J; Rowbotham, Kincaid K; Guo, Kai K; Huang, He H; Li, Yuxin Y; Jiang, Yi Y; Hur, Junguk J; Liu, Chunyu C; Peng, Junmin J; Wang, Xusheng X

Publication Date: 2022-02-08

Variant appearance in text: APEX1: Q51H

PubMed Link: 35136070

Variant Present in the following documents:

• 41467_2022_28411_MOESM4_ESM.xlsx, sheet 1

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Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy.

Cell

Krug, Karsten K; Jaehnig, Eric J EJ; Satpathy, Shankha S; Blumenberg, Lili L; Karpova, Alla A; Anurag, Meenakshi M; Miles, George G; Mertins, Philipp P; Geffen, Yifat Y; Tang, Lauren C LC; Heiman, David I DI; Cao, Song S; Maruvka, Yosef E YE; Lei, Jonathan T JT; Huang, Chen C; Kothadia, Ramani B RB; Colaprico, Antonio A; Birger, Chet C; Wang, Jarey J; Dou, Yongchao Y; Wen, Bo B; Shi, Zhiao Z; Liao, Yuxing Y; Wiznerowicz, Maciej M; Wyczalkowski, Matthew A MA; Chen, Xi Steven XS; Kennedy, Jacob J JJ; Paulovich, Amanda G AG; Thiagarajan, Mathangi M; Kinsinger, Christopher R CR; Hiltke, Tara T; Boja, Emily S ES; Mesri, Mehdi M; Robles, Ana I AI; Rodriguez, Henry H; Westbrook, Thomas F TF; Ding, Li L; Getz, Gad G; Clauser, Karl R KR; Fenyö, David D; Ruggles, Kelly V KV; Zhang, Bing B; Mani, D R DR; Carr, Steven A SA; Ellis, Matthew J MJ; Gillette, Michael A MA; ,

Publication Date: 2020-11-25

Variant appearance in text: APEX1: Q51H

PubMed Link: 33212010

Variant Present in the following documents:

• NIHMS1687926-supplement-Supplemental_Table_3.xlsx, sheet 5

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Tumor-associated APE1 variant exhibits reduced complementation efficiency but does not promote cancer cell phenotypes.

Environmental And Molecular Mutagenesis

Illuzzi, Jennifer L JL; McNeill, Daniel R DR; Bastian, Paul P; Brenerman, Boris B; Wersto, Robert R; Russell, Helen R HR; Bunz, Fred F; McKinnon, Peter J PJ; Becker, Kevin G KG; Wilson, David M DM

Publication Date: 2017-03

Variant appearance in text: REF-1: Q51H

PubMed Link: 28181292

Variant Present in the following documents:

• Main text

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Contribution of environment and genetics to pancreatic cancer susceptibility.

Plos One

Hocevar, Barbara A BA; Kamendulis, Lisa M LM; Pu, Xinzhu X; Perkins, Susan M SM; Wang, Zheng-Yu ZY; Johnston, Erica L EL; DeWitt, John M JM; Li, Lang L; Loehrer, Patrick J PJ; Klaunig, James E JE; Chiorean, E Gabriela EG

Publication Date: 2014

Variant appearance in text: APEX1: Q51H

PubMed Link: 24651674

Variant Present in the following documents:

• pone.0090052.pdf

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