Publications:

Landscape of somatic single nucleotide variants and indels in colorectal cancer and impact on survival.

Nature Communications

Zaidi, Syed H SH; Harrison, Tabitha A TA; Phipps, Amanda I AI; Steinfelder, Robert R; Trinh, Quang M QM; Qu, Conghui C; Banbury, Barbara L BL; Georgeson, Peter P; Grasso, Catherine S CS; Giannakis, Marios M; Adams, Jeremy B JB; Alwers, Elizabeth E; Amitay, Efrat L EL; Barfield, Richard T RT; Berndt, Sonja I SI; Borozan, Ivan I; Brenner, Hermann H; Brezina, Stefanie S; Buchanan, Daniel D DD; Cao, Yin Y; Chan, Andrew T AT; Chang-Claude, Jenny J; Connolly, Charles M CM; Drew, David A DA; Farris, Alton Brad AB; Figueiredo, Jane C JC; French, Amy J AJ; Fuchs, Charles S CS; Garraway, Levi A LA; Gruber, Steve S; Guinter, Mark A MA; Hamilton, Stanley R SR; Harlid, Sophia S; Heisler, Lawrence E LE; Hidaka, Akihisa A; Hopper, John L JL; Huang, Wen-Yi WY; Huyghe, Jeroen R JR; Jenkins, Mark A MA; Krzyzanowski, Paul M PM; Lemire, Mathieu M; Lin, Yi Y; Luo, Xuemei X; Mardis, Elaine R ER; McPherson, John D JD; Miller, Jessica K JK; Moreno, Victor V; Mu, Xinmeng Jasmine XJ; Nishihara, Reiko R; Papadopoulos, Nickolas N; Pasternack, Danielle D; Quist, Michael J MJ; Rafikova, Adilya A; Reid, Emma E G EEG; Shinbrot, Eve E; Shirts, Brian H BH; Stein, Lincoln D LD; Teney, Cherie D CD; Timms, Lee L; Um, Caroline Y CY; Van Guelpen, Bethany B; Van Tassel, Megan M; Wang, Xiaolong X; Wheeler, David A DA; Yung, Christina K CK; Hsu, Li L; Ogino, Shuji S; Gsur, Andrea A; Newcomb, Polly A PA; Gallinger, Steven S; Hoffmeister, Michael M; Campbell, Peter T PT; Thibodeau, Stephen N SN; Sun, Wei W; Hudson, Thomas J TJ; Peters, Ulrike U

Publication Date: 2020-07-20

Variant appearance in text: TP53: 677delG; G226fs

PubMed Link: 32686686

Variant Present in the following documents:

• 41467_2020_17386_MOESM4_ESM.xlsx, sheet 1

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Circulating DNA as prognostic biomarker in patients with advanced hepatocellular carcinoma: a translational exploratory study from the SORAMIC trial.

Journal Of Translational Medicine

Alunni-Fabbroni, Marianna M; Rönsch, Kerstin K; Huber, Thomas T; Cyran, Clemens C CC; Seidensticker, Max M; Mayerle, Julia J; Pech, Maciej M; Basu, Bristi B; Verslype, Chris C; Benckert, Julia J; Malfertheiner, Peter P; Ricke, Jens J

Publication Date: 2019-10-01

Variant appearance in text: TP53: 677delG; G226fs

PubMed Link: 31570105

Variant Present in the following documents:

• Main text
• 12967_2019_Article_2079.pdf

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appreci8: a pipeline for precise variant calling integrating 8 tools.

Bioinformatics (Oxford, England)

Sandmann, Sarah S; Karimi, Mohsen M; de Graaf, Aniek O AO; Rohde, Christian C; Göllner, Stefanie S; Varghese, Julian J; Ernsting, Jan J; Walldin, Gunilla G; van der Reijden, Bert A BA; Müller-Tidow, Carsten C; Malcovati, Luca L; Hellström-Lindberg, Eva E; Jansen, Joop H JH; Dugas, Martin M

Publication Date: 2018-12-15

Variant appearance in text: TP53: 676delG; Gly226fs

PubMed Link: 29945233

Variant Present in the following documents:

• bty518_supplementary_data_s10.xlsx, sheet 8

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Tumor protein 53 mutations are enriched in diffuse large B-cell lymphoma with irregular CD19 marker expression.

Scientific Reports

Kazantseva, Marina M; Hung, Noelyn A NA; Mehta, Sunali S; Roth, Imogen I; Eiholzer, Ramona R; Rich, Alison M AM; Seo, Benedict B; Baird, Margaret A MA; Braithwaite, Antony W AW; Slatter, Tania L TL

Publication Date: 2017-05-08

Variant appearance in text: TP53: G226Afs*21

PubMed Link: 28484276

Variant Present in the following documents:

• 41598_2017_1800_MOESM1_ESM.pdf

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Identification of molecular pathway aberrations in uterine serous carcinoma by genome-wide analyses.

Journal Of The National Cancer Institute

Kuhn, Elisabetta E; Wu, Ren-Chin RC; Guan, Bin B; Wu, Gang G; Zhang, Jinghui J; Wang, Yue Y; Song, Lei L; Yuan, Xiguo X; Wei, Lei L; Roden, Richard B S RB; Kuo, Kuan-Tin KT; Nakayama, Kentaro K; Clarke, Blaise B; Shaw, Patricia P; Olvera, Narciso N; Kurman, Robert J RJ; Levine, Douglas A DA; Wang, Tian-Li TL; Shih, Ie-Ming IeM

Publication Date: 2012-10-03

Variant appearance in text: TP53: 677del

PubMed Link: 22923510

Variant Present in the following documents:

• Main text

View BVdb publication page