TP53 c.625_626delinsCC ;(p.R209P)

Variant ID: 17-7578223-CT-GG

NM_000546.5(TP53):c.625_626delinsCC;(p.R209P)

This variant was identified in 14 publications

View GRCh38 version.




Publications:


A living biobank of patient-derived ductal carcinoma in situ mouse-intraductal xenografts identifies risk factors for invasive progression.

Cancer Cell
Hutten, Stefan J SJ; de Bruijn, Roebi R; Lutz, Catrin C; Badoux, Madelon M; Eijkman, Timo T; Chao, Xue X; Ciwinska, Marta M; Sheinman, Michael M; Messal, Hendrik H; Herencia-Ropero, Andrea A; Kristel, Petra P; Mulder, Lennart L; van der Waal, Rens R; Sanders, Joyce J; Almekinders, Mathilde M MM; Llop-Guevara, Alba A; Davies, Helen R HR; van Haren, Matthijs J MJ; Martin, Nathaniel I NI; Behbod, Fariba F; Nik-Zainal, Serena S; Serra, Violeta V; van Rheenen, Jacco J; Lips, Esther H EH; Wessels, Lodewyk F A LFA; , ; Wesseling, Jelle J; Scheele, Colinda L G J CLGJ; Jonkers, Jos J
Publication Date: 2023-04-24

Variant appearance in text: TP53: R209P
PubMed Link: 37116492
Variant Present in the following documents:
  • mmc3.xlsx, sheet 1
View BVdb publication page



Rational design of phase separating peptides based on phase separating protein sequence of p53.

Scientific Reports
Kamagata, Kiyoto K; Hando, Atsumi A; Ariefai, Maulana M; Iwaki, Nanako N; Kanbayashi, Saori S; Koike, Ryotaro R; Ikeda, Keisuke K
Publication Date: 2023-04-06

Variant appearance in text: p53: R209P
PubMed Link: 37024567
Variant Present in the following documents:
  • Main text
  • 41598_2023_Article_32632.pdf
View BVdb publication page



Whole-exome Sequencing of Nigerian Prostate Tumors from the Prostate Cancer Transatlantic Consortium (CaPTC) Reveals DNA Repair Genes Associated with African Ancestry.

Cancer Research Communications
White, Jason A JA; Kaninjing, Ernest T ET; Adeniji, Kayode A KA; Jibrin, Paul P; Obafunwa, John O JO; Ogo, Chidiebere N CN; Mohammed, Faruk F; Popoola, Ademola A; Fatiregun, Omolara A OA; Oluwole, Olabode P OP; Karanam, Balasubramanyam B; Elhussin, Isra I; Ambs, Stefan S; Tang, Wei W; Davis, Melissa M; Polak, Paz P; Campbell, Moray J MJ; Brignole, Kathryn R KR; Rotimi, Solomon O SO; Dean-Colomb, Windy W; Odedina, Folake T FT; Martin, Damali N DN; Yates, Clayton C
Publication Date: 2022-09

Variant appearance in text: TP53: R209P
PubMed Link: 36922933
Variant Present in the following documents:
  • crc-22-0136-s01.xlsx, sheet 1
  • crc-22-0136-s01.xlsx, sheet 3
View BVdb publication page



Rational peptide design for regulating liquid-liquid phase separation on the basis of residue-residue contact energy.

Scientific Reports
Kamagata, Kiyoto K; Ariefai, Maulana M; Takahashi, Hiroto H; Hando, Atsumi A; Subekti, Dwiky Rendra Graha DRG; Ikeda, Keisuke K; Hirano, Atsushi A; Kameda, Tomoshi T
Publication Date: 2022-08-12

Variant appearance in text: p53: R209P
PubMed Link: 35962177
Variant Present in the following documents:
  • Main text
  • 41598_2022_Article_17829.pdf
View BVdb publication page



Construction and validation of an immunoediting-based optimized neoantigen load (ioTNL) model to predict the response and prognosis of immune checkpoint therapy in various cancers.

Aging
Su, Xiaofan X; Jin, Haoxuan H; Wang, Jiaqian J; Lu, Huiping H; Gu, Tiantian T; Gao, Zhibo Z; Li, Manxiang M
Publication Date: 2022-05-25

Variant appearance in text: TP53: R209P
PubMed Link: 35613927
Variant Present in the following documents:
  • aging-14-204101-s004.xlsx, sheet 1
View BVdb publication page



Structure-dependent recruitment and diffusion of guest proteins in liquid droplets of FUS.

Scientific Reports
Kamagata, Kiyoto K; Iwaki, Nanako N; Kanbayashi, Saori S; Banerjee, Trishit T; Chiba, Rika R; Gaudon, Virginie V; Castaing, Bertrand B; Sakomoto, Seiji S
Publication Date: 2022-05-02

Variant appearance in text: p53: R209P
PubMed Link: 35501371
Variant Present in the following documents:
  • Main text
  • 41598_2022_Article_11177.pdf
View BVdb publication page



Molecular principles of recruitment and dynamics of guest proteins in liquid droplets.

Scientific Reports
Kamagata, Kiyoto K; Iwaki, Nanako N; Hazra, Milan Kumar MK; Kanbayashi, Saori S; Banerjee, Trishit T; Chiba, Rika R; Sakomoto, Seiji S; Gaudon, Virginie V; Castaing, Bertrand B; Takahashi, Hiroto H; Kimura, Michiko M; Oikawa, Hiroyuki H; Takahashi, Satoshi S; Levy, Yaakov Y
Publication Date: 2021-09-29

Variant appearance in text: p53: R209P
PubMed Link: 34588591
Variant Present in the following documents:
  • Main text
  • 41598_2021_Article_98955.pdf
View BVdb publication page



Transient binding and jumping dynamics of p53 along DNA revealed by sub-millisecond resolved single-molecule fluorescence tracking.

Scientific Reports
Subekti, Dwiky Rendra Graha DRG; Murata, Agato A; Itoh, Yuji Y; Takahashi, Satoshi S; Kamagata, Kiyoto K
Publication Date: 2020-08-13

Variant appearance in text: p53: R209P
PubMed Link: 32792545
Variant Present in the following documents:
  • Main text
  • 41598_2020_Article_70763.pdf
View BVdb publication page



Landscape of somatic single nucleotide variants and indels in colorectal cancer and impact on survival.

Nature Communications
Zaidi, Syed H SH; Harrison, Tabitha A TA; Phipps, Amanda I AI; Steinfelder, Robert R; Trinh, Quang M QM; Qu, Conghui C; Banbury, Barbara L BL; Georgeson, Peter P; Grasso, Catherine S CS; Giannakis, Marios M; Adams, Jeremy B JB; Alwers, Elizabeth E; Amitay, Efrat L EL; Barfield, Richard T RT; Berndt, Sonja I SI; Borozan, Ivan I; Brenner, Hermann H; Brezina, Stefanie S; Buchanan, Daniel D DD; Cao, Yin Y; Chan, Andrew T AT; Chang-Claude, Jenny J; Connolly, Charles M CM; Drew, David A DA; Farris, Alton Brad AB; Figueiredo, Jane C JC; French, Amy J AJ; Fuchs, Charles S CS; Garraway, Levi A LA; Gruber, Steve S; Guinter, Mark A MA; Hamilton, Stanley R SR; Harlid, Sophia S; Heisler, Lawrence E LE; Hidaka, Akihisa A; Hopper, John L JL; Huang, Wen-Yi WY; Huyghe, Jeroen R JR; Jenkins, Mark A MA; Krzyzanowski, Paul M PM; Lemire, Mathieu M; Lin, Yi Y; Luo, Xuemei X; Mardis, Elaine R ER; McPherson, John D JD; Miller, Jessica K JK; Moreno, Victor V; Mu, Xinmeng Jasmine XJ; Nishihara, Reiko R; Papadopoulos, Nickolas N; Pasternack, Danielle D; Quist, Michael J MJ; Rafikova, Adilya A; Reid, Emma E G EEG; Shinbrot, Eve E; Shirts, Brian H BH; Stein, Lincoln D LD; Teney, Cherie D CD; Timms, Lee L; Um, Caroline Y CY; Van Guelpen, Bethany B; Van Tassel, Megan M; Wang, Xiaolong X; Wheeler, David A DA; Yung, Christina K CK; Hsu, Li L; Ogino, Shuji S; Gsur, Andrea A; Newcomb, Polly A PA; Gallinger, Steven S; Hoffmeister, Michael M; Campbell, Peter T PT; Thibodeau, Stephen N SN; Sun, Wei W; Hudson, Thomas J TJ; Peters, Ulrike U
Publication Date: 2020-07-20

Variant appearance in text: TP53: R209P
PubMed Link: 32686686
Variant Present in the following documents:
  • 41467_2020_17386_MOESM4_ESM.xlsx, sheet 1
View BVdb publication page



Liquid-like droplet formation by tumor suppressor p53 induced by multivalent electrostatic interactions between two disordered domains.

Scientific Reports
Kamagata, Kiyoto K; Kanbayashi, Saori S; Honda, Masaya M; Itoh, Yuji Y; Takahashi, Hiroto H; Kameda, Tomoshi T; Nagatsugi, Fumi F; Takahashi, Satoshi S
Publication Date: 2020-01-17

Variant appearance in text: p53: R209P
PubMed Link: 31953488
Variant Present in the following documents:
  • Main text
  • 41598_2020_Article_57521.pdf
View BVdb publication page



Systematic Review of Somatic Mutations in Splenic Marginal Zone Lymphoma.

Scientific Reports
Jaramillo Oquendo, Carolina C; Parker, Helen H; Oscier, David D; Ennis, Sarah S; Gibson, Jane J; Strefford, Jonathan C JC
Publication Date: 2019-07-18

Variant appearance in text: TP53: R209P
PubMed Link: 31320741
Variant Present in the following documents:
  • 41598_2019_46906_MOESM1_ESM.xlsx, sheet 3
View BVdb publication page



Rational design using sequence information only produces a peptide that binds to the intrinsically disordered region of p53.

Scientific Reports
Kamagata, Kiyoto K; Mano, Eriko E; Itoh, Yuji Y; Wakamoto, Takuro T; Kitahara, Ryo R; Kanbayashi, Saori S; Takahashi, Hiroto H; Murata, Agato A; Kameda, Tomoshi T
Publication Date: 2019-06-28

Variant appearance in text: p53: R209P
PubMed Link: 31253862
Variant Present in the following documents:
  • Main text
  • 41598_2019_Article_44688.pdf
View BVdb publication page



One-Dimensional Search Dynamics of Tumor Suppressor p53 Regulated by a Disordered C-Terminal Domain.

Biophysical Journal
Murata, Agato A; Itoh, Yuji Y; Mano, Eriko E; Kanbayashi, Saori S; Igarashi, Chihiro C; Takahashi, Hiroto H; Takahashi, Satoshi S; Kamagata, Kiyoto K
Publication Date: 2017-06-06

Variant appearance in text: p53: R209P
PubMed Link: 28591603
Variant Present in the following documents:
  • Main text
View BVdb publication page



p53 Proteoforms and Intrinsic Disorder: An Illustration of the Protein Structure-Function Continuum Concept.

International Journal Of Molecular Sciences
Uversky, Vladimir N VN
Publication Date: 2016-11-10

Variant appearance in text: p53: R209P
PubMed Link: 27834926
Variant Present in the following documents:
  • ijms-17-01874-s001.pdf
View BVdb publication page