Publications:

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CTCF DNA-binding domain undergoes dynamic and selective protein-protein interactions.

Iscience

Zhou, Rong R; Tian, Kai K; Huang, Jie J; Duan, Wenjia W; Fu, Hongye H; Feng, Ying Y; Wang, Hui H; Jiang, Yongpeng Y; Li, Yuanjun Y; Wang, Rui R; Hu, Jiazhi J; Ma, Hanhui H; Qi, Zhi Z; Ji, Xiong X

Publication Date: 2022-09-16

Variant appearance in text: p53: 548C>T

PubMed Link: 36117989

Variant Present in the following documents:

• mmc4.xlsx, sheet 1

View BVdb publication page

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Somatic targeted mutation profiling of colorectal cancer precursor lesions.

Bmc Medical Genomics

Dos Santos, Wellington W; Dos Reis, Mariana Bisarro MB; Porto, Jun J; de Carvalho, Ana Carolina AC; Matsushita, Marcus M; Oliveira, Gabriela G; Syrjänen, Kari K; Reis, Rui Manuel RM; Guimarães, Denise Peixoto DP

Publication Date: 2022-06-28

Variant appearance in text: TP53: Ser183Leu

PubMed Link: 35761395

Variant Present in the following documents:

• 12920_2022_1294_MOESM6_ESM.xlsx, sheet 1
• 12920_2022_1294_MOESM5_ESM.xlsx, sheet 1

View BVdb publication page

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A computational and structural analysis of germline and somatic variants affecting the DDR mechanism, and their impact on human diseases.

Scientific Reports

Magraner-Pardo, Lorena L; Laskowski, Roman A RA; Pons, Tirso T; Thornton, Janet M JM

Publication Date: 2021-07-12

Variant appearance in text: TP53: 548C>T; Ser183Leu

PubMed Link: 34253785

Variant Present in the following documents:

• 41598_2021_93715_MOESM2_ESM.xlsx, sheet 8

View BVdb publication page

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Molecular Classification to Prognosticate Response in Medically Managed Endometrial Cancers and Endometrial Intraepithelial Neoplasia.

Cancers

Puechl, Allison M AM; Spinosa, Daniel D; Berchuck, Andrew A; Secord, Angeles Alvarez AA; Drury, Kerry E KE; Broadwater, Gloria G; Wong, Janice J; Whitaker, Regina R; Devos, Nicolas N; Corcoran, David L DL; Strickland, Kyle C KC; Previs, Rebecca A RA

Publication Date: 2021-06-07

Variant appearance in text: p53: 548C>T

PubMed Link: 34200374

Variant Present in the following documents:

• Main text
• cancers-13-02847.pdf

View BVdb publication page

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Mutation profile and immunoscore signature in thymic carcinomas: An exploratory study and review of the literature.

Thoracic Cancer

Asselta, Rosanna R; Di Tommaso, Luca L; Perrino, Matteo M; Destro, Annarita A; Giordano, Laura L; Cardamone, Giulia G; Rubino, Luca L; Santoro, Armando A; Duga, Stefano S; Zucali, Paolo Andrea PA

Publication Date: 2021-05

Variant appearance in text: TP53: 548C>T; S183L

PubMed Link: 33704917

Variant Present in the following documents:

• TCA-12-1271-s003.xls, sheet 1

View BVdb publication page

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Networking for advanced molecular diagnosis in acute myeloid leukemia patients is possible: the PETHEMA NGS-AML project

Haematologica

Sargas, Claudia C; Ayala, Rosa R; Chillón, María Carmen MC; Larráyoz, María J MJ; Carrillo-Cruz, Estrella E; Bilbao, Cristina C; Yébenes-Ramírez, Manuel M; Llop, Marta M; Rapado, Inmaculada I; García-Sanz, Ramón R; Vázquez, Iria I; Soria, Elena E; Florido-Ortega, Yanira Y; Janusz, Kamila K; Botella, Carmen C; Serrano, Josefina J; Martínez-Cuadrón, David D; Bergua, Juan J; Amigo, Mari Luz ML; Martínez-Sánchez, Pilar P; Tormo, Mar M; Bernal, Teresa T; Herrera-Puente, Pilar P; García, Raimundo R; Algarra, Lorenzo L; Sayas, María J MJ; Costilla-Barriga, Lisette L; Pérez-Santolalla, Esther E; Marchante, Inmaculada I; Lavilla-Rubira, Esperanza E; Noriega, Víctor V; Alonso-Domínguez, Juan M JM; Sanz, Miguel Á MÁ; Sánchez-Garcia, Joaquín J; Gómez-Casares, María T MT; Pérez-Simón, José A JA; Calasanz, María J MJ; González-Díaz, Marcos M; Martínez-López, Joaquín J; Barragán, Eva E; Montesinos, Pau P

Publication Date: 2021-12-01

Variant appearance in text: TP53: 548C>T; Ser183Phe

PubMed Link: 33179471

Variant Present in the following documents:

• 2020_263806_SARGAS_SUPPL.pdf

View BVdb publication page

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Networking for advanced molecular diagnosis in acute myeloid leukemia patients is possible: the PETHEMA NGS-AML project

Haematologica

Sargas, Claudia C; Ayala, Rosa R; Chillón, María Carmen MC; Larráyoz, María J MJ; Carrillo-Cruz, Estrella E; Bilbao, Cristina C; Yébenes-Ramírez, Manuel M; Llop, Marta M; Rapado, Inmaculada I; García-Sanz, Ramón R; Vázquez, Iria I; Soria, Elena E; Florido-Ortega, Yanira Y; Janusz, Kamila K; Botella, Carmen C; Serrano, Josefina J; Martínez-Cuadrón, David D; Bergua, Juan J; Amigo, Mari Luz ML; Martínez-Sánchez, Pilar P; Tormo, Mar M; Bernal, Teresa T; Herrera-Puente, Pilar P; García, Raimundo R; Algarra, Lorenzo L; Sayas, María J MJ; Costilla-Barriga, Lisette L; Pérez-Santolalla, Esther E; Marchante, Inmaculada I; Lavilla-Rubira, Esperanza E; Noriega, Víctor V; Alonso-Domínguez, Juan M JM; Sanz, Miguel Á MÁ; Sánchez-Garcia, Joaquín J; Gómez-Casares, María T MT; Pérez-Simón, José A JA; Calasanz, María J MJ; González-Díaz, Marcos M; Martínez-López, Joaquín J; Barragán, Eva E; Montesinos, Pau P

Publication Date: 2021-12-01

Variant appearance in text: TP53: 548C>T; Ser183Phe

PubMed Link: 33179471

Variant Present in the following documents:

• 2020_263806_SARGAS_SUPPL.pdf

View BVdb publication page

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Deep sequencing of circulating tumor DNA detects molecular residual disease and predicts recurrence in gastric cancer.

Cell Death & Disease

Yang, Jian J; Gong, Yuhua Y; Lam, Vincent K VK; Shi, Yan Y; Guan, Yanfang Y; Zhang, Yanyan Y; Ji, Liyan L; Chen, Yongsheng Y; Zhao, Yongliang Y; Qian, Feng F; Chen, Jun J; Li, Pingang P; Zhang, Fan F; Wang, Jiayin J; Zhang, Xuanping X; Yang, Ling L; Kopetz, Scott S; Futreal, P Andrew PA; Zhang, Jianjun J; Yi, Xin X; Xia, Xuefeng X; Yu, Peiwu P

Publication Date: 2020-05-11

Variant appearance in text: TP53: 548C>T; S183L

PubMed Link: 32393783

Variant Present in the following documents:

• 41419_2020_2531_MOESM11_ESM.xlsx, sheet 1

View BVdb publication page

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The functional landscape of the human phosphoproteome.

Nature Biotechnology

Ochoa, David D; Jarnuczak, Andrew F AF; Viéitez, Cristina C; Gehre, Maja M; Soucheray, Margaret M; Mateus, André A; Kleefeldt, Askar A AA; Hill, Anthony A; Garcia-Alonso, Luz L; Stein, Frank F; Krogan, Nevan J NJ; Savitski, Mikhail M MM; Swaney, Danielle L DL; Vizcaíno, Juan A JA; Noh, Kyung-Min KM; Beltrao, Pedro P

Publication Date: 2020-03

Variant appearance in text: TP53: 548C>T; Ser183Leu

PubMed Link: 31819260

Variant Present in the following documents:

• EMS84831-supplement-Table_S5.xlsx, sheet 1

View BVdb publication page

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From uncertainty to pathogenicity: clinical and functional interrogation of a rare TP53 in-frame deletion.

Cold Spring Harbor Molecular Case Studies

Quinn, Emily A EA; Maciaszek, Jamie L JL; Pinto, Emilia M EM; Phillips, Aaron H AH; Berdy, David D; Khandwala, Mohammad M; Upadhyaya, Santhosh A SA; Zambetti, Gerard P GP; Kriwacki, Richard W RW; Ellison, David W DW; Nichols, Kim E KE; Kesserwan, Chimene C

Publication Date: 2019-08

Variant appearance in text: TP53: 548C>T; Ser183Leu

PubMed Link: 30886117

Variant Present in the following documents:

• supp_mcs.a003921_Supplemental_Table_1a.xlsx, sheet 1

View BVdb publication page

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iFish: predicting the pathogenicity of human nonsynonymous variants using gene-specific/family-specific attributes and classifiers.

Scientific Reports

Wang, Meng M; Wei, Liping L

Publication Date: 2016-08-16

Variant appearance in text: TP53: S183L

PubMed Link: 27527004

Variant Present in the following documents:

• srep31321-s5.xls, sheet 1

View BVdb publication page

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The impact of tumor profiling approaches and genomic data strategies for cancer precision medicine.

Genome Medicine

Garofalo, Andrea A; Sholl, Lynette L; Reardon, Brendan B; Taylor-Weiner, Amaro A; Amin-Mansour, Ali A; Miao, Diana D; Liu, David D; Oliver, Nelly N; MacConaill, Laura L; Ducar, Matthew M; Rojas-Rudilla, Vanesa V; Giannakis, Marios M; Ghazani, Arezou A; Gray, Stacy S; Janne, Pasi P; Garber, Judy J; Joffe, Steve S; Lindeman, Neal N; Wagle, Nikhil N; Garraway, Levi A LA; Van Allen, Eliezer M EM

Publication Date: 2016-07-26

Variant appearance in text: TP53: 548C>T

PubMed Link: 27460824

Variant Present in the following documents:

• 13073_2016_333_MOESM4_ESM.xlsx, sheet 1
• 13073_2016_333_MOESM5_ESM.xlsx, sheet 1

View BVdb publication page

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Clinical significance of frequent somatic mutations detected by high-throughput targeted sequencing in archived colorectal cancer samples.

Journal Of Translational Medicine

Dallol, Ashraf A; Buhmeida, Abdelbaset A; Al-Ahwal, Mahmoud Shaheen MS; Al-Maghrabi, Jaudah J; Bajouh, Osama O; Al-Khayyat, Shadi S; Alam, Rania R; Abusanad, Atlal A; Turki, Rola R; Elaimi, Aisha A; Alhadrami, Hani A HA; Abuzenadah, Mohammed M; Banni, Huda H; Al-Qahtani, Mohammed H MH; Abuzenadah, Adel M AM

Publication Date: 2016-05-04

Variant appearance in text: TP53: Ser183Leu

PubMed Link: 27146902

Variant Present in the following documents:

• Main text
• 12967_2016_Article_878.pdf

View BVdb publication page

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Recurrent inactivating RASA2 mutations in melanoma.

Nature Genetics

Arafeh, Rand R; Qutob, Nouar N; Emmanuel, Rafi R; Keren-Paz, Alona A; Madore, Jason J; Elkahloun, Abdel A; Wilmott, James S JS; Gartner, Jared J JJ; Di Pizio, Antonella A; Winograd-Katz, Sabina S; Sindiri, Sivasish S; Rotkopf, Ron R; Dutton-Regester, Ken K; Johansson, Peter P; Pritchard, Antonia L AL; Waddell, Nicola N; Hill, Victoria K VK; Lin, Jimmy C JC; Hevroni, Yael Y; Rosenberg, Steven A SA; Khan, Javed J; Ben-Dor, Shifra S; Niv, Masha Y MY; Ulitsky, Igor I; Mann, Graham J GJ; Scolyer, Richard A RA; Hayward, Nicholas K NK; Samuels, Yardena Y

Publication Date: 2015-12

Variant appearance in text: p53: S183L

PubMed Link: 26502337

Variant Present in the following documents:

• NIHMS65345-supplement-Supplementary_table_3.xlsx, sheet 2

View BVdb publication page

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TP53 Mutational Status and Prediction of Benefit from Adjuvant 5-Fluorouracil in Stage III Colon Cancer Patients.

Ebiomedicine

Kandioler, Daniela D; Mittlböck, Martina M; Kappel, Sonja S; Puhalla, Harald H; Herbst, Friedrich F; Langner, Cord C; Wolf, Brigitte B; Tschmelitsch, Jörg J; Schippinger, Walter W; Steger, Günther G; Hofbauer, Friedrich F; Samonigg, Hellmut H; Gnant, Michael M; Teleky, Bela B; Kührer, Irene I; ,

Publication Date: 2015-08

Variant appearance in text: TP53: Ser183Leu

PubMed Link: 26425688

Variant Present in the following documents:

• Main text
• main.pdf

View BVdb publication page

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GESPA: classifying nsSNPs to predict disease association.

Bmc Bioinformatics

Khurana, Jay K JK; Reeder, Jay E JE; Shrimpton, Antony E AE; Thakar, Juilee J

Publication Date: 2015-07-25

Variant appearance in text: TP53: S183L

PubMed Link: 26206375

Variant Present in the following documents:

• 12859_2015_673_MOESM1_ESM.xls, sheet 1

View BVdb publication page

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Benchmarking mutation effect prediction algorithms using functionally validated cancer-related missense mutations.

Genome Biology

Martelotto, Luciano G LG; Ng, Charlotte Ky CK; De Filippo, Maria R MR; Zhang, Yan Y; Piscuoglio, Salvatore S; Lim, Raymond S RS; Shen, Ronglai R; Norton, Larry L; Reis-Filho, Jorge S JS; Weigelt, Britta B

Publication Date: 2014-10-28

Variant appearance in text: TP53: S183L

PubMed Link: 25348012

Variant Present in the following documents:

• 13059_2014_484_MOESM2_ESM.xlsx, sheet 1

View BVdb publication page

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A highly recurrent RPS27 5'UTR mutation in melanoma.

Oncotarget

Dutton-Regester, Ken K; Gartner, Jared J JJ; Emmanuel, Rafi R; Qutob, Nouar N; Davies, Michael A MA; Gershenwald, Jeffrey E JE; Robinson, William W; Robinson, Steven S; Rosenberg, Steven A SA; Scolyer, Richard A RA; Mann, Graham J GJ; Thompson, John F JF; Hayward, Nicholas K NK; Samuels, Yardena Y

Publication Date: 2014-05-30

Variant appearance in text: p53: S183L

PubMed Link: 24913145

Variant Present in the following documents:

• oncotarget-05-2912-s003.xlsx, sheet 1

View BVdb publication page

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Predicting the functional impact of protein mutations: application to cancer genomics.

Nucleic Acids Research

Reva, Boris B; Antipin, Yevgeniy Y; Sander, Chris C

Publication Date: 2011-09-01

Variant appearance in text: TP53: S183L

PubMed Link: 21727090

Variant Present in the following documents:

• supp_gkr407_Supplement2_Table_SM1_COSMIC_mutations.xls, sheet 1

View BVdb publication page

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Lineage analysis of early and advanced tubular adenocarcinomas of the stomach: continuous or discontinuous?

Bmc Cancer

Nakayama, Takahisa T; Ling, Zhi-Qiang ZQ; Mukaisho, Ken-ichi K; Hattori, Takanori T; Sugihara, Hiroyuki H

Publication Date: 2010-06-21

Variant appearance in text: TP53: S183L

PubMed Link: 20565940

Variant Present in the following documents:

• Main text
• 1471-2407-10-311.pdf

View BVdb publication page

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