Publications:

---

Single-cell RNA sequencing unifies developmental programs of Esophageal and Gastric Intestinal Metaplasia.

Cancer Discovery

Nowicki-Osuch, Karol K; Zhuang, Lizhe L; Cheung, Tik Shing TS; Black, Emily L EL; Masque-Soler, Neus N; Devonshire, Ginny G; Redmond, Aisling M AM; Freeman, Adam A; di Pietro, Massimilliano M; Pilonis, Nastazja N; Januszewicz, Wladyslaw W; O'Donovan, Maria M; Tavare, Simon S; Shields, Jacqueline D JD; Fitzgerald, Rebecca C RC

Publication Date: 2023-03-17

Variant appearance in text: SMARCA4: S23A

PubMed Link: 36929873

Variant Present in the following documents:

• Main text
• 1346.pdf

View BVdb publication page

---

Chromatin-directed proteomics-identified network of endogenous androgen receptor in prostate cancer cells.

Oncogene

Launonen, Kaisa-Mari KM; Paakinaho, Ville V; Sigismondo, Gianluca G; Malinen, Marjo M; Sironen, Reijo R; Hartikainen, Jaana M JM; Laakso, Hanna H; Visakorpi, Tapio T; Krijgsveld, Jeroen J; Niskanen, Einari A EA; Palvimo, Jorma J JJ

Publication Date: 2021-07

Variant appearance in text: SMARCA4: S23a

PubMed Link: 34127815

Variant Present in the following documents:

• Main text
• 41388_2021_Article_1887.pdf

View BVdb publication page

---

Functional characterization of SMARCA4 variants identified by targeted exome-sequencing of 131,668 cancer patients.

Nature Communications

Fernando, Tharu M TM; Piskol, Robert R; Bainer, Russell R; Sokol, Ethan S ES; Trabucco, Sally E SE; Zhang, Qing Q; Trinh, Huong H; Maund, Sophia S; Kschonsak, Marc M; Chaudhuri, Subhra S; Modrusan, Zora Z; Januario, Thomas T; Yauch, Robert L RL

Publication Date: 2020-11-03

Variant appearance in text: SMARCA4: S23A

PubMed Link: 33144586

Variant Present in the following documents:

• 41467_2020_19402_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

---

Mitochondrial complex I bridges a connection between regulation of carbon flexibility and gastrointestinal commensalism in the human fungal pathogen Candida albicans.

Plos Pathogens

Huang, Xinhua X; Chen, Xiaoqing X; He, Yongmin Y; Yu, Xiaoyu X; Li, Shanshan S; Gao, Ning N; Niu, Lida L; Mao, Yinhe Y; Wang, Yuanyuan Y; Wu, Xianwei X; Wu, Wenjuan W; Wu, Jianhua J; Zhou, Dongsheng D; Zhan, Xiangjiang X; Chen, Changbin C

Publication Date: 2017-06

Variant appearance in text: BRG1: S23A

PubMed Link: 28570675

Variant Present in the following documents:

• Main text

View BVdb publication page

---

VarDict: a novel and versatile variant caller for next-generation sequencing in cancer research.

Nucleic Acids Research

Lai, Zhongwu Z; Markovets, Aleksandra A; Ahdesmaki, Miika M; Chapman, Brad B; Hofmann, Oliver O; McEwen, Robert R; Johnson, Justin J; Dougherty, Brian B; Barrett, J Carl JC; Dry, Jonathan R JR

Publication Date: 2016-06-20

Variant appearance in text: SMARCA4: 67T>G; S23A

PubMed Link: 27060149

Variant Present in the following documents:

• supp_gkw227_nar-03544-met-k-2015-File003.xls, sheet 2

View BVdb publication page

---

Aberrant transcriptional regulations in cancers: genome, transcriptome and epigenome analysis of lung adenocarcinoma cell lines.

Nucleic Acids Research

Suzuki, Ayako A; Makinoshima, Hideki H; Wakaguri, Hiroyuki H; Esumi, Hiroyasu H; Sugano, Sumio S; Kohno, Takashi T; Tsuchihara, Katsuya K; Suzuki, Yutaka Y

Publication Date: 2014-12-16

Variant appearance in text: SMARCA4: S23A

PubMed Link: 25378332

Variant Present in the following documents:

• Main text
• gku885.pdf

View BVdb publication page

---