Publications:

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Estimating Dementia Risk Using Multifactorial Prediction Models.

Jama Network Open

Kivimäki, Mika M; Livingston, Gill G; Singh-Manoux, Archana A; Mars, Nina N; Lindbohm, Joni V JV; Pentti, Jaana J; Nyberg, Solja T ST; Pirinen, Matti M; Anderson, Emma L EL; Hingorani, Aroon D AD; Sipilä, Pyry N PN

Publication Date: 2023-06-01

Variant appearance in text: rs429358

PubMed Link: 37310738

Variant Present in the following documents:

• jamanetwopen-e2318132-s001.pdf

View BVdb publication page

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Precision Medicine in Fatty Liver Disease/Non-Alcoholic Fatty Liver Disease.

Journal Of Personalized Medicine

Valenzuela-Vallejo, Laura L; Sanoudou, Despina D; Mantzoros, Christos S CS

Publication Date: 2023-05-14

Variant appearance in text: rs429358

PubMed Link: 37241000

Variant Present in the following documents:

• Main text
• jpm-13-00830.pdf

View BVdb publication page

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Genetic variants in HFE are associated with non-alcoholic fatty liver disease in lean individuals.

Jhep Reports : Innovation In Hepatology

Sun, Zewen Z; Pan, Xingchen X; Tian, Aowen A; Surakka, Ida I; Wang, Tao T; Jiao, Xu X; He, Shanshan S; Song, Jinfang J; Tian, Xin X; Tong, Dan D; Wen, Jianping J; Zhang, Yonggang Y; Liu, Wanqing W; Chen, Peng P

Publication Date: 2023-07

Variant appearance in text: rs429358

PubMed Link: 37235137

Variant Present in the following documents:

• Main text
• main.pdf
• mmc1.pdf
• mmc4.pdf

View BVdb publication page

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Roles of ApoE4 on the Pathogenesis in Alzheimer's Disease and the Potential Therapeutic Approaches.

Cellular And Molecular Neurobiology

Sun, Yu-Ying YY; Wang, Zhun Z; Huang, Han-Chang HC

Publication Date: 2023-05-25

Variant appearance in text: rs429358

PubMed Link: 37227619

Variant Present in the following documents:

• Main text
• 10571_2023_Article_1365.pdf

View BVdb publication page

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A Preliminary Comparison of the Methylome and Transcriptome from the Prefrontal Cortex Across Alzheimer's Disease and Lewy Body Dementia.

Journal Of Alzheimer'S Disease Reports

Fisher, Daniel W DW; Tulloch, Jessica J; Yu, Chang-En CE; Tsuang, Debby D

Publication Date: 2023

Variant appearance in text: rs429358

PubMed Link: 37220618

Variant Present in the following documents:

• Main text
• adr-7-adr220114.pdf

View BVdb publication page

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Fused multi-modal similarity network as prior in guiding brain imaging genetic association.

Frontiers In Big Data

He, Bing B; Xie, Linhui L; Varathan, Pradeep P; Nho, Kwangsik K; Risacher, Shannon L SL; Saykin, Andrew J AJ; Yan, Jingwen J; ,

Publication Date: 2023

Variant appearance in text: rs429358

PubMed Link: 37215688

Variant Present in the following documents:

• Main text
• fdata-06-1151893.pdf

View BVdb publication page

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Gender specific factors contributing to cognitive resilience in APOE ɛ4 positive older adults in a population-based sample.

Scientific Reports

Zheng, Lidan L; Eramudugolla, Ranmalee R; Cherbuin, Nicolas N; Drouin, Shannon M SM; Dixon, Roger A RA; Anstey, Kaarin J KJ

Publication Date: 2023-05-17

Variant appearance in text: rs429358

PubMed Link: 37198167

Variant Present in the following documents:

• Main text
• 41598_2023_Article_34485.pdf

View BVdb publication page

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Analysis of Plasma Metabolic Profile on Ganglion Cell-Inner Plexiform Layer Thickness With Mortality and Common Diseases.

Jama Network Open

Yang, Shaopeng S; Zhu, Zhuoting Z; Yuan, Yixiong Y; Chen, Shida S; Shang, Xianwen X; Bulloch, Gabriella G; He, Mingguang M; Wang, Wei W

Publication Date: 2023-05-01

Variant appearance in text: rs429358

PubMed Link: 37191963

Variant Present in the following documents:

• jamanetwopen-e2313220-s001.pdf

View BVdb publication page

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Lipoprotein(a) Genotype Influences the Clinical Diagnosis of Familial Hypercholesterolemia.

Journal Of The American Heart Association

Olmastroni, Elena E; Gazzotti, Marta M; Averna, Maurizio M; Arca, Marcello M; Tarugi, Patrizia P; Calandra, Sebastiano S; Bertolini, Stefano S; Catapano, Alberico L AL; Casula, Manuela M; ,

Publication Date: 2023-05-15

Variant appearance in text: rs429358

PubMed Link: 37183858

Variant Present in the following documents:

• Main text
• JAH3-12-e029223.pdf

View BVdb publication page

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Functional variants identify sex-specific genes and pathways in Alzheimer's Disease.

Nature Communications

Bourquard, Thomas T; Lee, Kwanghyuk K; Al-Ramahi, Ismael I; Pham, Minh M; Shapiro, Dillon D; Lagisetty, Yashwanth Y; Soleimani, Shirin S; Mota, Samantha S; Wilhelm, Kevin K; Samieinasab, Maryam M; Kim, Young Won YW; Huh, Eunna E; Asmussen, Jennifer J; Katsonis, Panagiotis P; Botas, Juan J; Lichtarge, Olivier O

Publication Date: 2023-05-13

Variant appearance in text: rs429358

PubMed Link: 37179358

Variant Present in the following documents:

• Main text
• 41467_2023_Article_38374.pdf

View BVdb publication page

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Exploring the Genetic Predisposition to Epigenetic Changes in Alzheimer's Disease.

International Journal Of Molecular Sciences

Bryzgalov, Leonid O LO; Korbolina, Elena E EE; Merkulova, Tatiana I TI

Publication Date: 2023-04-27

Variant appearance in text: rs429358

PubMed Link: 37175659

Variant Present in the following documents:

• Main text
• ijms-24-07955.pdf

View BVdb publication page

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A Review of Biomarkers in Delirium Superimposed on Dementia (DSD) and Their Clinical Application to Personalized Treatment and Management.

Cureus

Jahangir, Saira S; Allala, Manoj M; Khan, Armughan S AS; Muyolema Arce, Veronica E VE; Patel, Anandkumar A; Soni, Karsh K; Sharafshah, Alireza A

Publication Date: 2023-05

Variant appearance in text: rs429358

PubMed Link: 37159618

Variant Present in the following documents:

• Main text
• cureus-0015-00000038627.pdf

View BVdb publication page

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Blood-Derived Progenitor Cells Are Depleted in Older Adults with Cognitive Impairment: A Role for Vascular Resilience?

Journal Of Alzheimer'S Disease : Jad

Marshall, Anisa J AJ; Gaubert, Aimee A; Kapoor, Arunima A; Tan, Alick A; McIntosh, Elissa E; Jang, Jung Yun JY; Yew, Belinda B; Ho, Jean K JK; Blanken, Anna E AE; Dutt, Shubir S; Sible, Isabel J IJ; Li, Yanrong Y; Rodgers, Kathleen K; Nation, Daniel A DA

Publication Date: 2023-05-02

Variant appearance in text: rs429358

PubMed Link: 37154177

Variant Present in the following documents:

• Main text
• jad-93-jad220269.pdf

View BVdb publication page

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Apolipoprotein E genetic variation, atherogenic index and cardiovascular disease risk assessment in an African population: An analysis of HIV and malaria patients in Ghana.

Plos One

Thomford, Nicholas Ekow NE; Anyanful, Akwasi A; Ateko, Richmond Owusu RO; Blackhurst, Dee D; Biney, Robert Peter RP; Boadi, Dennis D; Nyarko, Samuel Badu SB; Ekor, Martins M; Kyei, George Boateng GB

Publication Date: 2023

Variant appearance in text: rs429358

PubMed Link: 37134097

Variant Present in the following documents:

• Main text
• pone.0284697.pdf

View BVdb publication page

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Association of ApoE gene polymorphisms with serum lipid levels and the risk of type 2 diabetes mellitus in the Chinese Han population of central China.

Peerj

Zeng, Yali Y; Wen, Shuang S; Huan, Lijun L; Xiong, Liang L; Zhong, Botao B; Wang, Pengyun P

Publication Date: 2023

Variant appearance in text: rs429358

PubMed Link: 37123009

Variant Present in the following documents:

• Main text
• peerj-11-15226.pdf

View BVdb publication page

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Immune system-wide Mendelian randomization and triangulation analyses support autoimmunity as a modifiable component in dementia-causing diseases.

Nature Aging

Lindbohm, Joni V JV; Mars, Nina N; Sipilä, Pyry N PN; Singh-Manoux, Archana A; Runz, Heiko H; , ; Livingston, Gill G; Seshadri, Sudha S; Xavier, Ramnik R; Hingorani, Aroon D AD; Ripatti, Samuli S; Kivimäki, Mika M

Publication Date: 2022-10

Variant appearance in text: rs429358

PubMed Link: 37118290

Variant Present in the following documents:

• Main text
• 43587_2022_Article_293.pdf

View BVdb publication page

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MMP2 rs243866 and rs2285053 Polymorphisms and Alzheimer's Disease Risk in Slovak Caucasian Population.

Life (Basel, Switzerland)

Ocenasova, Agata A; Shawkatova, Ivana I; Javor, Juraj J; Parnicka, Zuzana Z; Minarik, Gabriel G; Kralova, Maria M; Kiralyova, Iliana I; Mikolaskova, Iveta I; Durmanova, Vladimira V

Publication Date: 2023-03-26

Variant appearance in text: rs429358

PubMed Link: 37109410

Variant Present in the following documents:

• Main text
• life-13-00882.pdf

View BVdb publication page

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Large multi-ethnic genetic analyses of amyloid imaging identify new genes for Alzheimer disease.

Acta Neuropathologica Communications

Ali, Muhammad M; Archer, Derek B DB; Gorijala, Priyanka P; Western, Daniel D; Timsina, Jigyasha J; Fernández, Maria V MV; Wang, Ting-Chen TC; Satizabal, Claudia L CL; Yang, Qiong Q; Beiser, Alexa S AS; Wang, Ruiqi R; Chen, Gengsheng G; Gordon, Brian B; Benzinger, Tammie L S TLS; Xiong, Chengjie C; Morris, John C JC; Bateman, Randall J RJ; Karch, Celeste M CM; McDade, Eric E; Goate, Alison A; Seshadri, Sudha S; Mayeux, Richard P RP; Sperling, Reisa A RA; Buckley, Rachel F RF; Johnson, Keith A KA; Won, Hong-Hee HH; Jung, Sang-Hyuk SH; Kim, Hang-Rai HR; Seo, Sang Won SW; Kim, Hee Jin HJ; Mormino, Elizabeth E; Laws, Simon M SM; Fan, Kang-Hsien KH; Kamboh, M Ilyas MI; Vemuri, Prashanthi P; Ramanan, Vijay K VK; Yang, Hyun-Sik HS; Wenzel, Allen A; Rajula, Hema Sekhar Reddy HSR; Mishra, Aniket A; Dufouil, Carole C; Debette, Stephanie S; Lopez, Oscar L OL; DeKosky, Steven T ST; Tao, Feifei F; Nagle, Michael W MW; , ; , ; , ; , ; , ; Hohman, Timothy J TJ; Sung, Yun Ju YJ; Dumitrescu, Logan L; Cruchaga, Carlos C

Publication Date: 2023-04-26

Variant appearance in text: rs429358

PubMed Link: 37101235

Variant Present in the following documents:

• Main text
• 40478_2023_Article_1563.pdf

View BVdb publication page

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Taxifolin for Cognitive Preservation in Patients with Mild Cognitive Impairment or Mild Dementia.

Journal Of Alzheimer'S Disease : Jad

Hattori, Yorito Y; Saito, Satoshi S; Nakaoku, Yuriko Y; Ogata, Soshiro S; Hattori, Masashi M; Nakatsuji, Mio M; Nishimura, Kunihiro K; Ihara, Masafumi M

Publication Date: 2023-04-15

Variant appearance in text: rs429358

PubMed Link: 37092223

Variant Present in the following documents:

• Main text
• jad-93-jad221293.pdf

View BVdb publication page

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Orthogonal analysis of variants in APOE gene using in-silico approaches reveals novel disrupting variants.

Frontiers In Bioinformatics

Li, Chang C; Hou, Ian I; Ma, Mingjia M; Wang, Grace G; Bai, Yongsheng Y; Liu, Xiaoming X

Publication Date: 2023

Variant appearance in text: APOE: C130R

PubMed Link: 37091907

Variant Present in the following documents:

• Main text
• fbinf-03-1122559.pdf

View BVdb publication page

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StocSum: stochastic summary statistics for whole genome sequencing studies.

Biorxiv : The Preprint Server For Biology

Wang, Nannan N; Yu, Bing B; Jun, Goo G; Qi, Qibin Q; Durazo-Arvizu, Ramon A RA; Lindstrom, Sara S; Morrison, Alanna C AC; Kaplan, Robert C RC; Boerwinkle, Eric E; Chen, Han H

Publication Date: 2023-04-07

Variant appearance in text: rs429358

PubMed Link: 37066281

Variant Present in the following documents:

• Main text
• nihpp-2023.04.06.535886v2.pdf

View BVdb publication page

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Characterization of altered molecular mechanisms in Parkinson's disease through cell type-resolved multiomics analyses.

Science Advances

Lee, Andrew J AJ; Kim, Changyoun C; Park, Seongwan S; Joo, Jaegeon J; Choi, Baekgyu B; Yang, Dongchan D; Jun, Kyoungho K; Eom, Junghyun J; Lee, Seung-Jae SJ; Chung, Sun Ju SJ; Rissman, Robert A RA; Chung, Jongkyeong J; Masliah, Eliezer E; Jung, Inkyung I

Publication Date: 2023-04-14

Variant appearance in text: rs429358

PubMed Link: 37058563

Variant Present in the following documents:

• Main text
• sciadv.abo2467.pdf

View BVdb publication page

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Apolipoprotein E Gene Polymorphism Effects on Lipid Metabolism and Risk of Cerebral Infarction in Northwest Han Chinese Population.

Pharmacogenomics And Personalized Medicine

Wang, Yaqi Y; Yang, Shuang S; Zhang, Suya S; Lu, Xiaoyu X; Ma, Wenbing W

Publication Date: 2023

Variant appearance in text: rs429358

PubMed Link: 37051559

Variant Present in the following documents:

• Main text
• pgpm-16-303.pdf

View BVdb publication page

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Automatic extraction of ranked SNP-phenotype associations from text using a BERT-LSTM-based method.

Bmc Bioinformatics

Bokharaeian, Behrouz B; Dehghani, Mohammad M; Diaz, Alberto A

Publication Date: 2023-04-12

Variant appearance in text: rs429358

PubMed Link: 37046202

Variant Present in the following documents:

• Main text
• 12859_2023_Article_5236.pdf

View BVdb publication page

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Dried fruit intake causally protects against low back pain: A Mendelian randomization study.

Frontiers In Nutrition

Huang, Jian J; Xie, Zheng-Fu ZF

Publication Date: 2023

Variant appearance in text: rs429358

PubMed Link: 37032770

Variant Present in the following documents:

• Main text
• fnut-10-1027481.pdf

View BVdb publication page

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Deep learning-based polygenic risk analysis for Alzheimer's disease prediction.

Communications Medicine

Zhou, Xiaopu X; Chen, Yu Y; Ip, Fanny C F FCF; Jiang, Yuanbing Y; Cao, Han H; Lv, Ge G; Zhong, Huan H; Chen, Jiahang J; Ye, Tao T; Chen, Yuewen Y; Zhang, Yulin Y; Ma, Shuangshuang S; Lo, Ronnie M N RMN; Tong, Estella P S EPS; , ; Mok, Vincent C T VCT; Kwok, Timothy C Y TCY; Guo, Qihao Q; Mok, Kin Y KY; Shoai, Maryam M; Hardy, John J; Chen, Lei L; Fu, Amy K Y AKY; Ip, Nancy Y NY

Publication Date: 2023-04-06

Variant appearance in text: rs429358

PubMed Link: 37024668

Variant Present in the following documents:

• Main text
• 43856_2023_Article_269.pdf
• 43856_2023_269_MOESM4_ESM.pdf

View BVdb publication page

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Vascular Risk Predicts Plasma Amyloid β 42/40 Through Cerebral Amyloid Burden in Apolipoprotein E ε4 Carriers.

Stroke

Sapkota, Shraddha S; Erickson, Kelsey K; Fletcher, Evan E; Tomaszewski Farias, Sarah E SE; Jin, Lee-Way LW; DeCarli, Charles C; ,

Publication Date: 2023-04-06

Variant appearance in text: rs429358

PubMed Link: 37021572

Variant Present in the following documents:

• Main text
• str-54-1227.pdf

View BVdb publication page

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Workflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues.

Nature Communications

Abelin, Jennifer G JG; Bergstrom, Erik J EJ; Rivera, Keith D KD; Taylor, Hannah B HB; Klaeger, Susan S; Xu, Charles C; Verzani, Eva K EK; Jackson White, C C; Woldemichael, Hilina B HB; Virshup, Maya M; Olive, Meagan E ME; Maynard, Myranda M; Vartany, Stephanie A SA; Allen, Joseph D JD; Phulphagar, Kshiti K; Harry Kane, M M; Rachimi, Suzanna S; Mani, D R DR; Gillette, Michael A MA; Satpathy, Shankha S; Clauser, Karl R KR; Udeshi, Namrata D ND; Carr, Steven A SA

Publication Date: 2023-04-03

Variant appearance in text: APOE: C130R

PubMed Link: 37012232

Variant Present in the following documents:

• 41467_2023_37547_MOESM10_ESM.xlsx, sheet 4
• 41467_2023_37547_MOESM10_ESM.xlsx, sheet 5
• 41467_2023_37547_MOESM12_ESM.xlsx, sheet 2
• 41467_2023_37547_MOESM12_ESM.xlsx, sheet 3
• 41467_2023_37547_MOESM10_ESM.xlsx, sheet 2

View BVdb publication page

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Genetic correlations between Alzheimer's disease and gut microbiome genera.

Scientific Reports

Cammann, Davis D; Lu, Yimei Y; Cummings, Melika J MJ; Zhang, Mark L ML; Cue, Joan Manuel JM; Do, Jenifer J; Ebersole, Jeffrey J; Chen, Xiangning X; Oh, Edwin C EC; Cummings, Jeffrey L JL; Chen, Jingchun J

Publication Date: 2023-03-31

Variant appearance in text: rs429358

PubMed Link: 37002253

Variant Present in the following documents:

• Main text
• 41598_2023_Article_31730.pdf

View BVdb publication page

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The genetic architecture of pain intensity in a sample of 598,339 U.S. veterans.

Medrxiv : The Preprint Server For Health Sciences

Toikumo, Sylvanus S; Vickers-Smith, Rachel R; Jinwala, Zeal Z; Xu, Heng H; Saini, Divya D; Hartwell, Emily E; Venegas, Mirko P MP; Sullivan, Kyle A KA; Xu, Ke K; Jacobson, Daniel A DA; Gelernter, Joel J; Rentsch, Christopher T CT; , ; Stahl, Eli E; Cheatle, Martin M; Zhou, Hang H; Waxman, Stephen G SG; Justice, Amy C AC; Kember, Rachel L RL; Kranzler, Henry R HR

Publication Date: 2023-03-13

Variant appearance in text: rs429358

PubMed Link: 36993749

Variant Present in the following documents:

• Main text
• nihpp-2023.03.09.23286958v1.pdf

View BVdb publication page

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Non-Alcoholic Fatty Liver Disease and Vitamin D in the UK Biobank: A Two-Sample Bidirectional Mendelian Randomisation Study.

Nutrients

Zhang, Zixuan Z; Burrows, Kimberley K; Fuller, Harriett H; Speliotes, Elizabeth K EK; Abeysekera, Kushala W M KWM; Thorne, James L JL; Lewis, Sarah J SJ; Zulyniak, Michael A MA; Moore, J Bernadette JB

Publication Date: 2023-03-16

Variant appearance in text: rs429358

PubMed Link: 36986172

Variant Present in the following documents:

• Main text
• nutrients-15-01442.pdf

View BVdb publication page

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HDL-Associated Proteins in Subjects with Polycystic Ovary Syndrome: A Proteomic Study.

Cells

Butler, Alexandra E AE; Moin, Abu Saleh Md ASM; Reiner, Željko Ž; Sathyapalan, Thozhukat T; Jamialahmadi, Tannaz T; Sahebkar, Amirhossein A; Atkin, Stephen L SL

Publication Date: 2023-03-09

Variant appearance in text: rs429358

PubMed Link: 36980195

Variant Present in the following documents:

• Main text
• cells-12-00855.pdf

View BVdb publication page

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Single nucleus multiomics identifies ZEB1 and MAFB as candidate regulators of Alzheimer's disease-specific cis-regulatory elements.

Cell Genomics

Anderson, Ashlyn G AG; Rogers, Brianne B BB; Loupe, Jacob M JM; Rodriguez-Nunez, Ivan I; Roberts, Sydney C SC; White, Lauren M LM; Brazell, J Nicholas JN; Bunney, William E WE; Bunney, Blynn G BG; Watson, Stanley J SJ; Cochran, J Nicholas JN; Myers, Richard M RM; Rizzardi, Lindsay F LF

Publication Date: 2023-03-08

Variant appearance in text: rs429358

PubMed Link: 36950385

Variant Present in the following documents:

• Main text

View BVdb publication page

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Association of Bone Mineral Density and Dementia: The Rotterdam Study.

Neurology

Xiao, Tian T; Ghatan, Samuel S; Mooldijk, Sanne S SS; Trajanoska, Katerina K; Oei, Ling L; Gomez, M Medina MM; Ikram, M Kamran MK; Rivadeneira, Fernando F; Ikram, M Arfan MA

Publication Date: 2023-03-22

Variant appearance in text: rs429358

PubMed Link: 36948596

Variant Present in the following documents:

• Main text
• WNL-2023-000111.pdf

View BVdb publication page

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Polygenic risk score penetrance & recurrence risk in familial Alzheimer disease.

Annals Of Clinical And Translational Neurology

Qiao, Min M; Lee, Annie J AJ; Reyes-Dumeyer, Dolly D; Tosto, Giuseppe G; Faber, Kelley K; Goate, Alison A; Renton, Alan A; Chao, Michael M; Boeve, Brad B; Cruchaga, Carlos C; Pericak-Vance, Margaret M; Haines, Jonathan L JL; Rosenberg, Roger R; Tsuang, Debby D; Sweet, Robert A RA; Bennett, David A DA; Wilson, Robert S RS; Foroud, Tatiana T; Mayeux, Richard R; Vardarajan, Badri N BN

Publication Date: 2023-03-22

Variant appearance in text: rs429358

PubMed Link: 36946865

Variant Present in the following documents:

• Main text
• ACN3-10-744.pdf

View BVdb publication page

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Mendelian randomization study of diabetes and dementia in the Million Veteran Program.

Medrxiv : The Preprint Server For Health Sciences

Litkowski, Elizabeth M EM; Logue, Mark W MW; Zhang, Rui R; Charest, Brian R BR; Lange, Ethan M EM; Hokanson, John E JE; Lynch, Julie A JA; Vujkovic, Marijana M; Phillips, Lawrence S LS; Hauger, Richard L RL; Lange, Leslie A LA; Raghavan, Sridharan S

Publication Date: 2023-03-09

Variant appearance in text: rs429358

PubMed Link: 36945581

Variant Present in the following documents:

• Main text
• nihpp-2023.03.07.23286526v1.pdf

View BVdb publication page

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ADVANCE-TBI study protocol: traumatic brain injury outcomes in UK military personnel serving in Afghanistan between 2003 and 2014 - a longitudinal cohort study.

Bmj Open

Graham, Neil S N NSN; Blissitt, Grace G; Zimmerman, Karl K; Friedland, Daniel D; Dumas, Marc-Emmanuel ME; Coady, Emma E; Heslegrave, Amanda A; Zetterberg, Henrik H; Escott-Price, Valentina V; Schofield, Susie S; Fear, Nicola T NT; Boos, Christopher C; Bull, Anthony M J AMJ; Cullinan, Paul P; Bennett, Alexander A; Sharp, David J DJ; ,

Publication Date: 2023-03-21

Variant appearance in text: rs429358

PubMed Link: 36944467

Variant Present in the following documents:

• Main text
• bmjopen-2022-069243.reviewer_comments.pdf
• bmjopen-2022-069243.pdf

View BVdb publication page

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