Publications:

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Heterogeneity of the cancer cell line metabolic landscape.

Molecular Systems Biology

Shorthouse, David D; Bradley, Jenna J; Critchlow, Susan E SE; Bendtsen, Claus C; Hall, Benjamin A BA

Publication Date: 2022-11

Variant appearance in text: IDH1: G97D

PubMed Link: 36321551

Variant Present in the following documents:

• Main text
• MSB-18-e11006.pdf

View BVdb publication page

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Beyond TNBC: Repositioning of Clofazimine Against a Broad Range of Wnt-Dependent Cancers.

Frontiers In Oncology

Xu, Jiabin J; Koval, Alexey A; Katanaev, Vladimir L VL

Publication Date: 2020

Variant appearance in text: IDH1: G97D

PubMed Link: 33363033

Variant Present in the following documents:

• fonc-10-602817.pdf

View BVdb publication page

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The role of myoglobin in epithelial cancers: Insights from transcriptomics.

International Journal Of Molecular Medicine

Bicker, Anne A; Nauth, Theresa T; Gerst, Daniela D; Aboouf, Mostafa Ahmed MA; Fandrey, Joachim J; Kristiansen, Glen G; Gorr, Thomas Alexander TA; Hankeln, Thomas T

Publication Date: 2020-02

Variant appearance in text: IDH1: 290G>A; Gly97Asp

PubMed Link: 31894249

Variant Present in the following documents:

• Supplementary_Data2.xlsx, sheet 10
• Supplementary_Data2.xlsx, sheet 12
• Supplementary_Data2.xlsx, sheet 11
• Supplementary_Data2.xlsx, sheet 9

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False-negative errors in next-generation sequencing contribute substantially to inconsistency of mutation databases.

Plos One

Kim, Young-Ho YH; Song, Yura Y; Kim, Jong-Kwang JK; Kim, Tae-Min TM; Sim, Hye Won HW; Kim, Hyung-Lae HL; Jang, Hyonchol H; Kim, Young-Woo YW; Hong, Kyeong-Man KM

Publication Date: 2019

Variant appearance in text: IDH1: 290G>A; G97D

PubMed Link: 31513681

Variant Present in the following documents:

• pone.0222535.s006.xlsx, sheet 1

View BVdb publication page

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appreci8: a pipeline for precise variant calling integrating 8 tools.

Bioinformatics (Oxford, England)

Sandmann, Sarah S; Karimi, Mohsen M; de Graaf, Aniek O AO; Rohde, Christian C; Göllner, Stefanie S; Varghese, Julian J; Ernsting, Jan J; Walldin, Gunilla G; van der Reijden, Bert A BA; Müller-Tidow, Carsten C; Malcovati, Luca L; Hellström-Lindberg, Eva E; Jansen, Joop H JH; Dugas, Martin M

Publication Date: 2018-12-15

Variant appearance in text: IDH1: 290G>A; Gly97Asp

PubMed Link: 29945233

Variant Present in the following documents:

• bty518_supplementary_data_s2.xlsx, sheet 8

View BVdb publication page

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Prevalence of the single-nucleotide polymorphism rs11554137 (IDH1105GGT) in brain tumors of a cohort of Italian patients.

Scientific Reports

Acquaviva, Giorgia G; Visani, Michela M; de Biase, Dario D; Marucci, Gianluca G; Franceschi, Enrico E; Tosoni, Alicia A; Brandes, Alba A AA; Rhoden, Kerry J KJ; Pession, Annalisa A; Tallini, Giovanni G

Publication Date: 2018-03-13

Variant appearance in text: IDH1: G97D

PubMed Link: 29535392

Variant Present in the following documents:

• Main text

View BVdb publication page

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Toward an integrated map of genetic interactions in cancer cells.

Molecular Systems Biology

Rauscher, Benedikt B; Heigwer, Florian F; Henkel, Luisa L; Hielscher, Thomas T; Voloshanenko, Oksana O; Boutros, Michael M

Publication Date: 2018-02-21

Variant appearance in text: IDH1: G97D

PubMed Link: 29467179

Variant Present in the following documents:

• MSB-14-e7656-s003.xlsx, sheet 1

View BVdb publication page

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High-Throughput Assessment of Structural Continuity in Biologics.

Analytical Chemistry

Musetti, Caterina C; Bean, Mark F MF; Quinque, Geoffrey T GT; Kwiatkowski, Christopher C; Szewczuk, Lawrence M LM; Baldoni, John J; Zajac, Matthew A MA

Publication Date: 2018-02-20

Variant appearance in text: IDH1: G97D

PubMed Link: 29369625

Variant Present in the following documents:

• Main text
• ac8b00180_si_001.pdf
• ac8b00180.pdf

View BVdb publication page

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Oncometabolite D-2-Hydroxyglurate Directly Induces Epithelial-Mesenchymal Transition and is Associated with Distant Metastasis in Colorectal Cancer.

Scientific Reports

Colvin, Hugh H; Nishida, Naohiro N; Konno, Masamitsu M; Haraguchi, Naotsugu N; Takahashi, Hidekazu H; Nishimura, Junichi J; Hata, Taishi T; Kawamoto, Koichi K; Asai, Ayumu A; Tsunekuni, Kenta K; Koseki, Jun J; Mizushima, Tsunekazu T; Satoh, Taroh T; Doki, Yuichiro Y; Mori, Masaki M; Ishii, Hideshi H

Publication Date: 2016-11-08

Variant appearance in text: IDH1: G97D

PubMed Link: 27824159

Variant Present in the following documents:

• Main text
• srep36289.pdf

View BVdb publication page

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A Landscape of Pharmacogenomic Interactions in Cancer.

Cell

Iorio, Francesco F; Knijnenburg, Theo A TA; Vis, Daniel J DJ; Bignell, Graham R GR; Menden, Michael P MP; Schubert, Michael M; Aben, Nanne N; Gonçalves, Emanuel E; Barthorpe, Syd S; Lightfoot, Howard H; Cokelaer, Thomas T; Greninger, Patricia P; van Dyk, Ewald E; Chang, Han H; de Silva, Heshani H; Heyn, Holger H; Deng, Xianming X; Egan, Regina K RK; Liu, Qingsong Q; Mironenko, Tatiana T; Mitropoulos, Xeni X; Richardson, Laura L; Wang, Jinhua J; Zhang, Tinghu T; Moran, Sebastian S; Sayols, Sergi S; Soleimani, Maryam M; Tamborero, David D; Lopez-Bigas, Nuria N; Ross-Macdonald, Petra P; Esteller, Manel M; Gray, Nathanael S NS; Haber, Daniel A DA; Stratton, Michael R MR; Benes, Cyril H CH; Wessels, Lodewyk F A LFA; Saez-Rodriguez, Julio J; McDermott, Ultan U; Garnett, Mathew J MJ

Publication Date: 2016-07-28

Variant appearance in text: IDH1: 290G>A; G97D

PubMed Link: 27397505

Variant Present in the following documents:

• mmc3.xlsx, sheet 3

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Aspirin Reduces Plasma Concentrations of the Oncometabolite 2-Hydroxyglutarate: Results of a Randomized, Double-Blind, Crossover Trial.

Cancer Epidemiology, Biomarkers & Prevention : A Publication Of The American Association For Cancer Research, Cosponsored By The American Society Of Preventive Oncology

Liesenfeld, David B DB; Botma, Akke A; Habermann, Nina N; Toth, Reka R; Weigel, Christoph C; Popanda, Odilia O; Klika, Karel D KD; Potter, John D JD; Lampe, Johanna W JW; Ulrich, Cornelia M CM

Publication Date: 2016-01

Variant appearance in text: IDH1: G97D

PubMed Link: 26585118

Variant Present in the following documents:

• Main text

View BVdb publication page

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Amplicon sequencing of colorectal cancer: variant calling in frozen and formalin-fixed samples.

Plos One

Betge, Johannes J; Kerr, Grainne G; Miersch, Thilo T; Leible, Svenja S; Erdmann, Gerrit G; Galata, Christian L CL; Zhan, Tianzuo T; Gaiser, Timo T; Post, Stefan S; Ebert, Matthias P MP; Horisberger, Karoline K; Boutros, Michael M

Publication Date: 2015

Variant appearance in text: IDH1: G97D

PubMed Link: 26010451

Variant Present in the following documents:

• pone.0127146.s013.xlsx, sheet 3
• pone.0127146.s014.xlsx, sheet 4
• pone.0127146.s014.xlsx, sheet 1
• pone.0127146.s013.xlsx, sheet 4
• pone.0127146.s014.xlsx, sheet 3
• pone.0127146.s013.xlsx, sheet 1

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Clinical massively parallel next-generation sequencing analysis of 409 cancer-related genes for mutations and copy number variations in solid tumours.

British Journal Of Cancer

Singh, R R RR; Patel, K P KP; Routbort, M J MJ; Aldape, K K; Lu, X X; Manekia, J J; Abraham, R R; Reddy, N G NG; Barkoh, B A BA; Veliyathu, J J; Medeiros, L J LJ; Luthra, R R

Publication Date: 2014-11-11

Variant appearance in text: IDH1: G97D

PubMed Link: 25314059

Variant Present in the following documents:

View BVdb publication page

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New routes to targeted therapy of intrahepatic cholangiocarcinomas revealed by next-generation sequencing.

The Oncologist

Ross, Jeffrey S JS; Wang, Kai K; Gay, Laurie L; Al-Rohil, Rami R; Rand, Janne V JV; Jones, David M DM; Lee, Hwa J HJ; Sheehan, Christine E CE; Otto, Geoff A GA; Palmer, Gary G; Yelensky, Roman R; Lipson, Doron D; Morosini, Deborah D; Hawryluk, Matthew M; Catenacci, Daniel V T DV; Miller, Vincent A VA; Churi, Chaitanya C; Ali, Siraj S; Stephens, Philip J PJ

Publication Date: 2014-03

Variant appearance in text: IDH1: G97D

PubMed Link: 24563076

Variant Present in the following documents:

• Main text

View BVdb publication page

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Next-generation sequencing-based multigene mutational screening for acute myeloid leukemia using MiSeq: applicability for diagnostics and disease monitoring.

Haematologica

Luthra, Rajyalakshmi R; Patel, Keyur P KP; Reddy, Neelima G NG; Haghshenas, Varan V; Routbort, Mark J MJ; Harmon, Michael A MA; Barkoh, Bedia A BA; Kanagal-Shamanna, Rashmi R; Ravandi, Farhad F; Cortes, Jorge E JE; Kantarjian, Hagop M HM; Medeiros, L Jeffrey LJ; Singh, Rajesh R RR

Publication Date: 2014-03

Variant appearance in text: IDH1: G97D

PubMed Link: 24142997

Variant Present in the following documents:

• Main text

View BVdb publication page

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IDH1 and IDH2 mutations in tumorigenesis: mechanistic insights and clinical perspectives.

Clinical Cancer Research : An Official Journal Of The American Association For Cancer Research

Yang, Hui H; Ye, Dan D; Guan, Kun-Liang KL; Xiong, Yue Y

Publication Date: 2012-10-15

Variant appearance in text: IDH1: G97D

PubMed Link: 23071358

Variant Present in the following documents:

• Main text

View BVdb publication page

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Cancer-associated isocitrate dehydrogenase mutations inactivate NADPH-dependent reductive carboxylation.

The Journal Of Biological Chemistry

Leonardi, Roberta R; Subramanian, Chitra C; Jackowski, Suzanne S; Rock, Charles O CO

Publication Date: 2012-04-27

Variant appearance in text: IDH1: G97D

PubMed Link: 22442146

Variant Present in the following documents:

• Main text

View BVdb publication page

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Identification of additional IDH mutations associated with oncometabolite R(-)-2-hydroxyglutarate production.

Oncogene

Ward, P S PS; Cross, J R JR; Lu, C C; Weigert, O O; Abel-Wahab, O O; Levine, R L RL; Weinstock, D M DM; Sharp, K A KA; Thompson, C B CB

Publication Date: 2012-05-10

Variant appearance in text: IDH1: G97D

PubMed Link: 21996744

Variant Present in the following documents:

• Main text

View BVdb publication page

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Integrated molecular genetic profiling of pediatric high-grade gliomas reveals key differences with the adult disease.

Journal Of Clinical Oncology : Official Journal Of The American Society Of Clinical Oncology

Paugh, Barbara S BS; Qu, Chunxu C; Jones, Chris C; Liu, Zhaoli Z; Adamowicz-Brice, Martyna M; Zhang, Junyuan J; Bax, Dorine A DA; Coyle, Beth B; Barrow, Jennifer J; Hargrave, Darren D; Lowe, James J; Gajjar, Amar A; Zhao, Wei W; Broniscer, Alberto A; Ellison, David W DW; Grundy, Richard G RG; Baker, Suzanne J SJ

Publication Date: 2010-06-20

Variant appearance in text: IDH1: G97D

PubMed Link: 20479398

Variant Present in the following documents:

• Main text

View BVdb publication page

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