Publications:

SMAP is a pipeline for sample matching in proteogenomics.

Nature Communications

Li, Ling L; Niu, Mingming M; Erickson, Alyssa A; Luo, Jie J; Rowbotham, Kincaid K; Guo, Kai K; Huang, He H; Li, Yuxin Y; Jiang, Yi Y; Hur, Junguk J; Liu, Chunyu C; Peng, Junmin J; Wang, Xusheng X

Publication Date: 2022-02-08

Variant appearance in text: SIM2: A70T

PubMed Link: 35136070

Variant Present in the following documents:

• 41467_2022_28411_MOESM4_ESM.xlsx, sheet 1

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The Participation of the Intrinsically Disordered Regions of the bHLH-PAS Transcription Factors in Disease Development.

International Journal Of Molecular Sciences

Kolonko-Adamska, Marta M; Uversky, Vladimir N VN; Greb-Markiewicz, Beata B

Publication Date: 2021-03-11

Variant appearance in text: SIM: A70T

PubMed Link: 33799876

Variant Present in the following documents:

• Main text
• ijms-22-02868-s001.pdf
• ijms-22-02868.pdf

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Establishment and genomic characterization of gingivobuccal carcinoma cell lines with smokeless tobacco associated genetic alterations and oncogenic PIK3CA mutation.

Scientific Reports

Pansare, Kshama K; Gardi, Nilesh N; Kamat, Sayee S; Dange, Prerana P; Previn, Rahul R; Gera, Poonam P; Kowtal, Pradnya P; Amin, Kishore K; Sarin, Rajiv R

Publication Date: 2019-06-04

Variant appearance in text: SIM2: A70T; rs146997732

PubMed Link: 31164688

Variant Present in the following documents:

• 41598_2019_44143_MOESM2_ESM.xls, sheet 1

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Clinical Mass Spectrometry in the Bioinformatics Era: A Hitchhiker's Guide.

Computational And Structural Biotechnology Journal

Chong, Yeow-Kuan YK; Ho, Chi-Chun CC; Leung, Shui-Yee SY; Lau, Susanna K P SKP; Woo, Patrick C Y PCY

Publication Date: 2018

Variant appearance in text: SIM: A70T

PubMed Link: 30237866

Variant Present in the following documents:

• Main text
• main.pdf

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Exome sequencing of hepatocellular carcinomas identifies new mutational signatures and potential therapeutic targets.

Nature Genetics

Schulze, Kornelius K; Imbeaud, Sandrine S; Letouzé, Eric E; Alexandrov, Ludmil B LB; Calderaro, Julien J; Rebouissou, Sandra S; Couchy, Gabrielle G; Meiller, Clément C; Shinde, Jayendra J; Soysouvanh, Frederic F; Calatayud, Anna-Line AL; Pinyol, Roser R; Pelletier, Laura L; Balabaud, Charles C; Laurent, Alexis A; Blanc, Jean-Frederic JF; Mazzaferro, Vincenzo V; Calvo, Fabien F; Villanueva, Augusto A; Nault, Jean-Charles JC; Bioulac-Sage, Paulette P; Stratton, Michael R MR; Llovet, Josep M JM; Zucman-Rossi, Jessica J

Publication Date: 2015-05

Variant appearance in text: SIM2: A70T

PubMed Link: 25822088

Variant Present in the following documents:

• NIHMS62359-supplement-Table3.xlsx, sheet 1

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