SI c.863C>G ;(p.S288C)

Variant ID: 3-164781274-G-C

NM_001041.3(SI):c.863C>G;(p.S288C)

This variant was identified in 121 publications

View GRCh38 version.




Publications:


Elucidating the origins of phycocyanobilin biosynthesis and phycobiliproteins.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Rockwell, Nathan C NC; Martin, Shelley S SS; Lagarias, J Clark JC
Publication Date: 2023-04-25

Variant appearance in text: SI: S288C
PubMed Link: 37071675
Variant Present in the following documents:
  • pnas.2300770120.sapp.pdf
View BVdb publication page



A proteome scale study reveals how plastic surfaces and agitation promote protein aggregation.

Scientific Reports
Schvartz, Marion M; Saudrais, Florent F; Devineau, Stéphanie S; Aude, Jean-Christophe JC; Chédin, Stéphane S; Henry, Céline C; Millán-Oropeza, Aarón A; Perrault, Thomas T; Pieri, Laura L; Pin, Serge S; Boulard, Yves Y; Brotons, Guillaume G; Renault, Jean-Philippe JP
Publication Date: 2023-01-21

Variant appearance in text: SI: S288C
PubMed Link: 36681766
Variant Present in the following documents:
  • Main text
  • 41598_2023_Article_28412.pdf
View BVdb publication page



Regulation of the DEAH/RHA helicase Prp43 by the G-patch factor Pfa1.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Enders, Marieke M; Ficner, Ralf R; Adio, Sarah S
Publication Date: 2022-11-29

Variant appearance in text: SI: S288c
PubMed Link: 36409901
Variant Present in the following documents:
  • pnas.2203567119.sapp.pdf
View BVdb publication page



The Statistical Trends of Protein Evolution: A Lesson from AlphaFold Database.

Molecular Biology And Evolution
Tang, Qian-Yuan QY; Ren, Weitong W; Wang, Jun J; Kaneko, Kunihiko K
Publication Date: 2022-10-07

Variant appearance in text: SI: S288C
PubMed Link: 36108094
Variant Present in the following documents:
  • msac197.pdf
View BVdb publication page



Loss-of-function mutation survey revealed that genes with background-dependent fitness are rare and functionally related in yeast.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Caudal, Elodie E; Friedrich, Anne A; Jallet, Arthur A; Garin, Marion M; Hou, Jing J; Schacherer, Joseph J
Publication Date: 2022-09-13

Variant appearance in text: SI: S288C
PubMed Link: 36067306
Variant Present in the following documents:
  • Main text
  • pnas.202204206.pdf
View BVdb publication page



Methanol biotransformation toward high-level production of fatty acid derivatives by engineering the industrial yeast Pichia pastoris.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Cai, Peng P; Wu, Xiaoyan X; Deng, Jun J; Gao, Linhui L; Shen, Yiwei Y; Yao, Lun L; Zhou, Yongjin J YJ
Publication Date: 2022-07-19

Variant appearance in text: SI: S288C
PubMed Link: 35858340
Variant Present in the following documents:
  • Main text
  • pnas.202201711.pdf
View BVdb publication page



Multiple molecular events underlie stochastic switching between 2 heritable cell states in fungi.

Plos Biology
Ziv, Naomi N; Brenes, Lucas R LR; Johnson, Alexander A
Publication Date: 2022-05

Variant appearance in text: SI: S288C
PubMed Link: 35594297
Variant Present in the following documents:
  • Main text
View BVdb publication page



ER-phagy requires the assembly of actin at sites of contact between the cortical ER and endocytic pits.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Liu, Dongmei D; Mari, Muriel M; Li, Xia X; Reggiori, Fulvio F; Ferro-Novick, Susan S; Novick, Peter P
Publication Date: 2022-02-08

Variant appearance in text: SI: S288c
PubMed Link: 35101986
Variant Present in the following documents:
  • Main text
View BVdb publication page



Activity-Based Protein Profiling for the Identification of Novel Carbohydrate-Active Enzymes Involved in Xylan Degradation in the Hyperthermophilic Euryarchaeon Thermococcus sp. Strain 2319x1E.

Frontiers In Microbiology
Klaus, Thomas T; Ninck, Sabrina S; Albersmeier, Andreas A; Busche, Tobias T; Wibberg, Daniel D; Jiang, Jianbing J; Elcheninov, Alexander G AG; Zayulina, Kseniya S KS; Kaschani, Farnusch F; Bräsen, Christopher C; Overkleeft, Herman S HS; Kalinowski, Jörn J; Kublanov, Ilya V IV; Kaiser, Markus M; Siebers, Bettina B
Publication Date: 2021

Variant appearance in text: SI: S288C
PubMed Link: 35095781
Variant Present in the following documents:
  • Data_Sheet_1.pdf
View BVdb publication page



Correlation Between the Evolution of Somatic Alterations During Lymphatic Metastasis and Clinical Outcome in Penile Squamous Cell Carcinoma.

Frontiers In Oncology
Cao, Jian J; Yang, Chun-He CH; Han, Wei-Qing WQ; Xie, Yu Y; Liu, Zhi-Zhong ZZ; Jiang, Shu-Suan SS
Publication Date: 2021

Variant appearance in text: SI: 863C>G; S288C
PubMed Link: 34150614
Variant Present in the following documents:
  • Table_2.xlsx, sheet 1
View BVdb publication page



Avoiding organelle mutational meltdown across eukaryotes with or without a germline bottleneck.

Plos Biology
Edwards, David M DM; Røyrvik, Ellen C EC; Chustecki, Joanna M JM; Giannakis, Konstantinos K; Glastad, Robert C RC; Radzvilavicius, Arunas L AL; Johnston, Iain G IG
Publication Date: 2021-04

Variant appearance in text: SI: S288C
PubMed Link: 33891583
Variant Present in the following documents:
  • Main text
View BVdb publication page



Structure of Gcn1 bound to stalled and colliding 80S ribosomes.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Pochopien, Agnieszka A AA; Beckert, Bertrand B; Kasvandik, Sergo S; Berninghausen, Otto O; Beckmann, Roland R; Tenson, Tanel T; Wilson, Daniel N DN
Publication Date: 2021-04-06

Variant appearance in text: SI: S288c
PubMed Link: 33790014
Variant Present in the following documents:
  • pnas.2022756118.sapp.pdf
View BVdb publication page



Substrate discrimination and quality control require each catalytic activity of TRAMP and the nuclear RNA exosome.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Das, Mom M; Zattas, Dimitrios D; Zinder, John C JC; Wasmuth, Elizabeth V EV; Henri, Julien J; Lima, Christopher D CD
Publication Date: 2021-04-06

Variant appearance in text: SI: S288C
PubMed Link: 33782132
Variant Present in the following documents:
  • Main text
View BVdb publication page



Enhancing lifespan of budding yeast by pharmacological lowering of amino acid pools.

Aging
Hepowit, Nathaniel L NL; Macedo, Jessica K A JKA; Young, Lyndsay E A LEA; Liu, Ke K; Sun, Ramon C RC; MacGurn, Jason A JA; Dickson, Robert C RC
Publication Date: 2021-03-21

Variant appearance in text: SI: S288C
PubMed Link: 33744865
Variant Present in the following documents:
  • aging-13-202849.pdf
View BVdb publication page



Perfect Match Genomic Landscape strategy: Refinement and customization of reference genomes.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Palacios-Flores, Kim K; García-Sotelo, Jair J; Castillo, Alejandra A; Uribe, Carina C; Morales, Lucía L; Boege, Margareta M; Dávila, Guillermo G; Flores, Margarita M; Palacios, Rafael R
Publication Date: 2021-04-06

Variant appearance in text: SI: S288C
PubMed Link: 33737447
Variant Present in the following documents:
  • Main text
View BVdb publication page



Characterization of JEN family carboxylate transporters from the acid-tolerant yeast Pichia kudriavzevii and their applications in succinic acid production.

Microbial Biotechnology
Xi, Yongyan Y; Zhan, Tao T; Xu, Hongtao H; Chen, Jing J; Bi, Changhao C; Fan, Feiyu F; Zhang, Xueli X
Publication Date: 2021-05

Variant appearance in text: SI: S288C
PubMed Link: 33629807
Variant Present in the following documents:
  • Main text
View BVdb publication page



Trichoderma reesei Rad51 tolerates mismatches in hybrid meiosis with diverse genome sequences.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Li, Wan-Chen WC; Lee, Chia-Yi CY; Lan, Wei-Hsuan WH; Woo, Tai-Ting TT; Liu, Hou-Cheng HC; Yeh, Hsin-Yi HY; Chang, Hao-Yen HY; Chuang, Yu-Chien YC; Chen, Chiung-Ya CY; Chuang, Chi-Ning CN; Chen, Chia-Ling CL; Hsueh, Yi-Ping YP; Li, Hung-Wen HW; Chi, Peter P; Wang, Ting-Fang TF
Publication Date: 2021-02-23

Variant appearance in text: SI: S288c
PubMed Link: 33593897
Variant Present in the following documents:
  • Main text
View BVdb publication page



Identification of novel genes involved in neutral lipid storage by quantitative trait loci analysis of Saccharomyces cerevisiae.

Bmc Genomics
Pačnik, Klavdija K; Ogrizović, Mojca M; Diepold, Matthias M; Eisenberg, Tobias T; Žganjar, Mia M; Žun, Gašper G; Kužnik, Beti B; Gostinčar, Cene C; Curk, Tomaž T; Petrovič, Uroš U; Natter, Klaus K
Publication Date: 2021-02-09

Variant appearance in text: SI: S288c
PubMed Link: 33563210
Variant Present in the following documents:
  • Main text
View BVdb publication page



Expression attenuation as a mechanism of robustness against gene duplication.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Ascencio, Diana D; Diss, Guillaume G; Gagnon-Arsenault, Isabelle I; Dubé, Alexandre K AK; DeLuna, Alexander A; Landry, Christian R CR
Publication Date: 2021-02-09

Variant appearance in text: SI: S288c
PubMed Link: 33526669
Variant Present in the following documents:
  • pnas.2014345118.sapp.pdf
View BVdb publication page



Characterization of systemic genomic instability in budding yeast.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Sampaio, Nadia M V NMV; Ajith, V P VP; Watson, Ruth A RA; Heasley, Lydia R LR; Chakraborty, Parijat P; Rodrigues-Prause, Aline A; Malc, Ewa P EP; Mieczkowski, Piotr A PA; Nishant, Koodali T KT; Argueso, Juan Lucas JL
Publication Date: 2020-11-10

Variant appearance in text: SI: S288c
PubMed Link: 33106418
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genome-wide mapping of spontaneous genetic alterations in diploid yeast cells.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Sui, Yang Y; Qi, Lei L; Wu, Jian-Kun JK; Wen, Xue-Ping XP; Tang, Xing-Xing XX; Ma, Zhong-Jun ZJ; Wu, Xue-Chang XC; Zhang, Ke K; Kokoska, Robert J RJ; Zheng, Dao-Qiong DQ; Petes, Thomas D TD
Publication Date: 2020-11-10

Variant appearance in text: SI: S288c
PubMed Link: 33106417
Variant Present in the following documents:
  • pnas.2018633117.sapp.pdf
View BVdb publication page



Structural basis for CDK7 activation by MAT1 and Cyclin H.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Peissert, Stefan S; Schlosser, Andreas A; Kendel, Rafaela R; Kuper, Jochen J; Kisker, Caroline C
Publication Date: 2020-10-27

Variant appearance in text: SI: S288c
PubMed Link: 33055219
Variant Present in the following documents:
  • Main text
View BVdb publication page



In vivo mRNA display enables large-scale proteomics by next generation sequencing.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Oikonomou, Panos P; Salatino, Roberto R; Tavazoie, Saeed S
Publication Date: 2020-10-27

Variant appearance in text: SI: S288c
PubMed Link: 33037152
Variant Present in the following documents:
  • Main text
View BVdb publication page



Trajectory and uniqueness of mutational signatures in yeast mutators.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Loeillet, Sophie S; Herzog, Mareike M; Puddu, Fabio F; Legoix, Patricia P; Baulande, Sylvain S; Jackson, Stephen P SP; Nicolas, Alain G AG
Publication Date: 2020-10-06

Variant appearance in text: SI: S288c
PubMed Link: 32968016
Variant Present in the following documents:
  • Main text
  • pnas.2011332117.sapp.pdf
View BVdb publication page



Proteome reallocation from amino acid biosynthesis to ribosomes enables yeast to grow faster in rich media.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Björkeroth, Johan J; Campbell, Kate K; Malina, Carl C; Yu, Rosemary R; Di Bartolomeo, Francesca F; Nielsen, Jens J
Publication Date: 2020-09-01

Variant appearance in text: SI: S288c
PubMed Link: 32817546
Variant Present in the following documents:
  • Main text
View BVdb publication page



RNA abasic sites in yeast and human cells.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Liu, Yaojuan Y; Rodriguez, Yesenia Y; Ross, Robert L RL; Zhao, Ruoxia R; Watts, Jason A JA; Grunseich, Christopher C; Bruzel, Alan A; Li, Dongjun D; Burdick, Joshua T JT; Prasad, Rajendra R; Crouch, Robert J RJ; Limbach, Patrick A PA; Wilson, Samuel H SH; Cheung, Vivian G VG
Publication Date: 2020-08-25

Variant appearance in text: SI: S288C
PubMed Link: 32788345
Variant Present in the following documents:
  • pnas.2011511117.sapp.pdf
View BVdb publication page



Thermoplastic microfluidic bioreactors with integrated electrodes to study tumor treating fields on yeast cells.

Biomicrofluidics
Gencturk, Elif E; Ulgen, Kutlu O KO; Mutlu, Senol S
Publication Date: 2020-05

Variant appearance in text: SI: S288C
PubMed Link: 32477443
Variant Present in the following documents:
  • Main text
View BVdb publication page



Analysis of APOBEC-induced mutations in yeast strains with low levels of replicative DNA polymerases.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Sui, Yang Y; Qi, Lei L; Zhang, Ke K; Saini, Natalie N; Klimczak, Leszek J LJ; Sakofsky, Cynthia J CJ; Gordenin, Dmitry A DA; Petes, Thomas D TD; Zheng, Dao-Qiong DQ
Publication Date: 2020-04-28

Variant appearance in text: SI: S288c
PubMed Link: 32277034
Variant Present in the following documents:
  • pnas.1922472117.sapp.pdf
View BVdb publication page



Mitotic and pheromone-specific intrinsic polarization cues interfere with gradient sensing in Saccharomyces cerevisiae.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Vasen, Gustavo G; Dunayevich, Paula P; Colman-Lerner, Alejandro A
Publication Date: 2020-03-24

Variant appearance in text: SI: S288C
PubMed Link: 32152126
Variant Present in the following documents:
  • Main text
View BVdb publication page



UNAGI: an automated pipeline for nanopore full-length cDNA sequencing uncovers novel transcripts and isoforms in yeast.

Functional & Integrative Genomics
Al Kadi, Mohamad M; Jung, Nicolas N; Ito, Shingo S; Kameoka, Shoichiro S; Hishida, Takashi T; Motooka, Daisuke D; Nakamura, Shota S; Iida, Tetsuya T; Okuzaki, Daisuke D
Publication Date: 2020-07

Variant appearance in text: SI: S288C
PubMed Link: 31955296
Variant Present in the following documents:
  • Main text
  • 10142_2020_Article_732.pdf
View BVdb publication page



Electroporation and Mass Spectrometry: A New Paradigm for In Situ Analysis of Intact Proteins Direct from Living Yeast Colonies.

Analytical Chemistry
Kocurek, Klaudia I KI; Havlikova, Jana J; Buchan, Emma E; Tanner, Andrew A; May, Robin C RC; Cooper, Helen J HJ
Publication Date: 2020-02-04

Variant appearance in text: SI: S288c
PubMed Link: 31922714
Variant Present in the following documents:
  • Main text
View BVdb publication page



Length Specificity and Polymerization Mechanism of (1,3)-β-d-Glucan Synthase in Fungal Cell Wall Biosynthesis.

Biochemistry
Chhetri, Abhishek A; Loksztejn, Anna A; Nguyen, Hai H; Pianalto, Kaila M KM; Kim, Mi Jung MJ; Hong, Jiyong J; Alspaugh, J Andrew JA; Yokoyama, Kenichi K
Publication Date: 2020-02-11

Variant appearance in text: SI: S288c
PubMed Link: 31899625
Variant Present in the following documents:
  • Main text
View BVdb publication page



Evolutionary regain of lost gene circuit function.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Kheir Gouda, Mirna M; Manhart, Michael M; Balázsi, Gábor G
Publication Date: 2019-12-10

Variant appearance in text: SI: S288C
PubMed Link: 31754027
Variant Present in the following documents:
  • pnas.1912257116.sapp.pdf
View BVdb publication page



Deletions associated with stabilization of the Top1 cleavage complex in yeast are products of the nonhomologous end-joining pathway.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Cho, Jang-Eun JE; Jinks-Robertson, Sue S
Publication Date: 2019-11-05

Variant appearance in text: SI: S288C
PubMed Link: 31636207
Variant Present in the following documents:
  • Main text
View BVdb publication page



Multilayered horizontal operon transfers from bacteria reconstruct a thiamine salvage pathway in yeasts.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Gonçalves, Carla C; Gonçalves, Paula P
Publication Date: 2019-10-29

Variant appearance in text: SI: S288C
PubMed Link: 31611373
Variant Present in the following documents:
  • Main text
View BVdb publication page



The Evolutionary History of Ephs and Ephrins: Toward Multicellular Organisms.

Molecular Biology And Evolution
Arcas, Aida A; Wilkinson, David G DG; Nieto, M Ángela MÁ
Publication Date: 2020-02-01

Variant appearance in text: SI: S288c
PubMed Link: 31589243
Variant Present in the following documents:
  • msz222_supplementary_material.pdf
View BVdb publication page



Mrx6 regulates mitochondrial DNA copy number in Saccharomyces cerevisiae by engaging the evolutionarily conserved Lon protease Pim1.

Molecular Biology Of The Cell
Göke, Aylin A; Schrott, Simon S; Mizrak, Arda A; Belyy, Vladislav V; Osman, Christof C; Walter, Peter P
Publication Date: 2020-03-19

Variant appearance in text: SI: S288c
PubMed Link: 31532710
Variant Present in the following documents:
  • Main text
View BVdb publication page



A consensus S. cerevisiae metabolic model Yeast8 and its ecosystem for comprehensively probing cellular metabolism.

Nature Communications
Lu, Hongzhong H; Li, Feiran F; Sánchez, Benjamín J BJ; Zhu, Zhengming Z; Li, Gang G; Domenzain, Iván I; Marcišauskas, Simonas S; Anton, Petre Mihail PM; Lappa, Dimitra D; Lieven, Christian C; Beber, Moritz Emanuel ME; Sonnenschein, Nikolaus N; Kerkhoven, Eduard J EJ; Nielsen, Jens J
Publication Date: 2019-08-08

Variant appearance in text: SI: S288c
PubMed Link: 31395883
Variant Present in the following documents:
  • Main text
  • 41467_2019_11581_MOESM1_ESM.pdf
  • 41467_2019_Article_11581.pdf
View BVdb publication page



Gid10 as an alternative N-recognin of the Pro/N-degron pathway.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Melnykov, Artem A; Chen, Shun-Jia SJ; Varshavsky, Alexander A
Publication Date: 2019-08-06

Variant appearance in text: SI: S288c
PubMed Link: 31337681
Variant Present in the following documents:
  • Main text
View BVdb publication page



Prediction and identification of recurrent genomic rearrangements that generate chimeric chromosomes in Saccharomyces cerevisiae.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Palacios-Flores, Kim K; Castillo, Alejandra A; Uribe, Carina C; García Sotelo, Jair J; Boege, Margareta M; Dávila, Guillermo G; Flores, Margarita M; Palacios, Rafael R; Morales, Lucia L
Publication Date: 2019-04-23

Variant appearance in text: SI: S288C
PubMed Link: 30962378
Variant Present in the following documents:
  • Main text
View BVdb publication page



Environment-dependent fitness gains can be driven by horizontal gene transfer of transporter-encoding genes.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Milner, David S DS; Attah, Victoria V; Cook, Emily E; Maguire, Finlay F; Savory, Fiona R FR; Morrison, Mark M; Müller, Carolin A CA; Foster, Peter G PG; Talbot, Nicholas J NJ; Leonard, Guy G; Richards, Thomas A TA
Publication Date: 2019-03-19

Variant appearance in text: SI: S288c
PubMed Link: 30842288
Variant Present in the following documents:
  • Main text
View BVdb publication page



Complex modifier landscape underlying genetic background effects.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Hou, Jing J; Tan, Guihong G; Fink, Gerald R GR; Andrews, Brenda J BJ; Boone, Charles C
Publication Date: 2019-03-12

Variant appearance in text: SI: S288C
PubMed Link: 30804202
Variant Present in the following documents:
  • Main text
View BVdb publication page



Intercellular cooperation in a fungal plant pathogen facilitates host colonization.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Peyraud, Rémi R; Mbengue, Malick M; Barbacci, Adelin A; Raffaele, Sylvain S
Publication Date: 2019-02-19

Variant appearance in text: SI: S288C
PubMed Link: 30728304
Variant Present in the following documents:
  • Main text
  • pnas.201811267.pdf
View BVdb publication page



Defining the impact of mutation accumulation on replicative lifespan in yeast using cancer-associated mutator phenotypes.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Lee, Mitchell B MB; Dowsett, Ian T IT; Carr, Daniel T DT; Wasko, Brian M BM; Stanton, Sarah G SG; Chung, Michael S MS; Ghodsian, Niloufar N; Bode, Anna A; Kiflezghi, Michael G MG; Uppal, Priya A PA; Grayden, Katherine A KA; Elala, Yordanos C YC; Tang, Thao T TT; Tran, Ngoc H B NHB; Tran, Thu H B THB; Diep, Anh B AB; Hope, Michael M; Promislow, Daniel E L DEL; Kennedy, Scott R SR; Kaeberlein, Matt M; Herr, Alan J AJ
Publication Date: 2019-02-19

Variant appearance in text: SI: S288C
PubMed Link: 30718408
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genome-wide analysis of genomic alterations induced by oxidative DNA damage in yeast.

Nucleic Acids Research
Zhang, Ke K; Zheng, Dao-Qiong DQ; Sui, Yang Y; Qi, Lei L; Petes, Thomas D TD
Publication Date: 2019-04-23

Variant appearance in text: SI: S288c
PubMed Link: 30668788
Variant Present in the following documents:
  • Main text
View BVdb publication page



Multiscale effects of heating and cooling on genes and gene networks.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Charlebois, Daniel A DA; Hauser, Kevin K; Marshall, Sylvia S; Balázsi, Gábor G
Publication Date: 2018-11-06

Variant appearance in text: SI: S288c
PubMed Link: 30341217
Variant Present in the following documents:
  • Main text
View BVdb publication page



Functional and evolutionary characterization of a secondary metabolite gene cluster in budding yeasts.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Krause, David J DJ; Kominek, Jacek J; Opulente, Dana A DA; Shen, Xing-Xing XX; Zhou, Xiaofan X; Langdon, Quinn K QK; DeVirgilio, Jeremy J; Hulfachor, Amanda Beth AB; Kurtzman, Cletus P CP; Rokas, Antonis A; Hittinger, Chris Todd CT
Publication Date: 2018-10-23

Variant appearance in text: SI: S288C
PubMed Link: 30297402
Variant Present in the following documents:
  • Main text
View BVdb publication page



Shedding Light on Chemically Mediated Tri-Trophic Interactions: A 1H-NMR Network Approach to Identify Compound Structural Features and Associated Biological Activity.

Frontiers In Plant Science
Richards, Lora A LA; Oliveira, Celso C; Dyer, Lee A LA; Rumbaugh, Arran A; Urbano-Muñoz, Federico F; Wallace, Ian S IS; Dodson, Craig D CD; Jeffrey, Christopher S CS
Publication Date: 2018

Variant appearance in text: SI: S288c
PubMed Link: 30174676
Variant Present in the following documents:
  • Main text
  • fpls-09-01155.pdf
View BVdb publication page



TAMRA-polypyrrole for A/T sequence visualization on DNA molecules.

Nucleic Acids Research
Lee, Seonghyun S; Kawamoto, Yusuke Y; Vaijayanthi, Thangavel T; Park, Jihyun J; Bae, Jaeyoung J; Kim-Ha, Jeongsil J; Sugiyama, Hiroshi H; Jo, Kyubong K
Publication Date: 2018-10-12

Variant appearance in text: SI: S288c
PubMed Link: 29931115
Variant Present in the following documents:
  • Main text
  • gky531.pdf
View BVdb publication page



Natural variation of chronological aging in the Saccharomyces cerevisiae species reveals diet-dependent mechanisms of life span control.

Npj Aging And Mechanisms Of Disease
Jung, Paul P PP; Zhang, Zhi Z; Paczia, Nicole N; Jaeger, Christian C; Ignac, Tomasz T; May, Patrick P; Linster, Carole L CL
Publication Date: 2018

Variant appearance in text: SI: S288c
PubMed Link: 29560271
Variant Present in the following documents:
  • 41514_2018_Article_22.pdf
View BVdb publication page



High-resolution mapping of cis-regulatory variation in budding yeast.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Kita, Ryosuke R; Venkataram, Sandeep S; Zhou, Yiqi Y; Fraser, Hunter B HB
Publication Date: 2017-12-12

Variant appearance in text: SI: S288c
PubMed Link: 29183975
Variant Present in the following documents:
  • Main text
View BVdb publication page



Across the tree of life, radiation resistance is governed by antioxidant Mn2+, gauged by paramagnetic resonance.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Sharma, Ajay A; Gaidamakova, Elena K EK; Grichenko, Olga O; Matrosova, Vera Y VY; Hoeke, Veronika V; Klimenkova, Polina P; Conze, Isabel H IH; Volpe, Robert P RP; Tkavc, Rok R; Gostinčar, Cene C; Gunde-Cimerman, Nina N; DiRuggiero, Jocelyne J; Shuryak, Igor I; Ozarowski, Andrew A; Hoffman, Brian M BM; Daly, Michael J MJ
Publication Date: 2017-10-31

Variant appearance in text: SI: S288C
PubMed Link: 29042516
Variant Present in the following documents:
  • pnas.201713608.pdf
View BVdb publication page



The replicative lifespan-extending deletion of SGF73 results in altered ribosomal gene expression in yeast.

Aging Cell
Mason, Amanda G AG; Garza, Renee M RM; McCormick, Mark A MA; Patel, Bhumil B; Kennedy, Brian K BK; Pillus, Lorraine L; La Spada, Albert R AR
Publication Date: 2017-08

Variant appearance in text: SI: S288c
PubMed Link: 28568901
Variant Present in the following documents:
  • ACEL-16-785.pdf
View BVdb publication page



Phosphate is the third nutrient monitored by TOR in Candida albicans and provides a target for fungal-specific indirect TOR inhibition.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Liu, Ning-Ning NN; Flanagan, Peter R PR; Zeng, Jumei J; Jani, Niketa M NM; Cardenas, Maria E ME; Moran, Gary P GP; Köhler, Julia R JR
Publication Date: 2017-06-13

Variant appearance in text: SI: S288C
PubMed Link: 28566496
Variant Present in the following documents:
  • Main text
View BVdb publication page



Hsp104 disaggregase at normal levels cures many [PSI+] prion variants in a process promoted by Sti1p, Hsp90, and Sis1p.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Gorkovskiy, Anton A; Reidy, Michael M; Masison, Daniel C DC; Wickner, Reed B RB
Publication Date: 2017-05-23

Variant appearance in text: SI: S288C
PubMed Link: 28484020
Variant Present in the following documents:
  • Main text
View BVdb publication page



Binding, sliding, and function of cohesin during transcriptional activation.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Borrie, Melinda S MS; Campor, John S JS; Joshi, Hansa H; Gartenberg, Marc R MR
Publication Date: 2017-02-14

Variant appearance in text: SI: S288c
PubMed Link: 28137853
Variant Present in the following documents:
  • Main text
View BVdb publication page



Chromatin potentiates transcription.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Nagai, Shigeki S; Davis, Ralph E RE; Mattei, Pierre Jean PJ; Eagen, Kyle Patrick KP; Kornberg, Roger D RD
Publication Date: 2017-02-14

Variant appearance in text: SI: S288C
PubMed Link: 28137832
Variant Present in the following documents:
  • Main text
View BVdb publication page



TORC1-dependent sumoylation of Rpc82 promotes RNA polymerase III assembly and activity.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Chymkowitch, Pierre P; Nguéa P, Aurélie A; Aanes, Håvard H; Robertson, Joseph J; Klungland, Arne A; Enserink, Jorrit M JM
Publication Date: 2017-01-31

Variant appearance in text: SI: S288c
PubMed Link: 28096404
Variant Present in the following documents:
  • Main text
View BVdb publication page



Crystal structures of the TRIC trimeric intracellular cation channel orthologues.

Cell Research
Kasuya, Go G; Hiraizumi, Masahiro M; Maturana, Andrés D AD; Kumazaki, Kaoru K; Fujiwara, Yuichiro Y; Liu, Keihong K; Nakada-Nakura, Yoshiko Y; Iwata, So S; Tsukada, Keisuke K; Komori, Tomotaka T; Uemura, Sotaro S; Goto, Yuhei Y; Nakane, Takanori T; Takemoto, Mizuki M; Kato, Hideaki E HE; Yamashita, Keitaro K; Wada, Miki M; Ito, Koichi K; Ishitani, Ryuichiro R; Hattori, Motoyuki M; Nureki, Osamu O
Publication Date: 2016-12

Variant appearance in text: SI: S288C
PubMed Link: 27909292
Variant Present in the following documents:
  • cr2016140a.pdf
View BVdb publication page



Model-based transcriptome engineering promotes a fermentative transcriptional state in yeast.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Michael, Drew G DG; Maier, Ezekiel J EJ; Brown, Holly H; Gish, Stacey R SR; Fiore, Christopher C; Brown, Randall H RH; Brent, Michael R MR
Publication Date: 2016-11-22

Variant appearance in text: SI: S288C
PubMed Link: 27810962
Variant Present in the following documents:
  • Main text
View BVdb publication page



Heavy Sugar and Heavy Water Create Tunable Intact Protein Mass Increases for Quantitative Mass Spectrometry in Any Feed and Organism.

Analytical Chemistry
Quijada, Jeniffer V JV; Schmitt, Nicholas D ND; Salisbury, Joseph P JP; Auclair, Jared R JR; Agar, Jeffrey N JN
Publication Date: 2016-11-15

Variant appearance in text: SI: S288C
PubMed Link: 27744677
Variant Present in the following documents:
  • Main text
View BVdb publication page



Stimulating S-adenosyl-l-methionine synthesis extends lifespan via activation of AMPK.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Ogawa, Takafumi T; Tsubakiyama, Ryohei R; Kanai, Muneyoshi M; Koyama, Tetsuya T; Fujii, Tsutomu T; Iefuji, Haruyuki H; Soga, Tomoyoshi T; Kume, Kazunori K; Miyakawa, Tokichi T; Hirata, Dai D; Mizunuma, Masaki M
Publication Date: 2016-10-18

Variant appearance in text: SI: S288C
PubMed Link: 27698120
Variant Present in the following documents:
  • Main text
View BVdb publication page



Engineering Yarrowia lipolytica as a platform for synthesis of drop-in transportation fuels and oleochemicals.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Xu, Peng P; Qiao, Kangjian K; Ahn, Woo Suk WS; Stephanopoulos, Gregory G
Publication Date: 2016-09-27

Variant appearance in text: SI: S288c
PubMed Link: 27621436
Variant Present in the following documents:
  • Main text
View BVdb publication page



A Concentration-Dependent Liquid Phase Separation Can Cause Toxicity upon Increased Protein Expression.

Cell Reports
Bolognesi, Benedetta B; Lorenzo Gotor, Nieves N; Dhar, Riddhiman R; Cirillo, Davide D; Baldrighi, Marta M; Tartaglia, Gian Gaetano GG; Lehner, Ben B
Publication Date: 2016-06-28

Variant appearance in text: SI: S288C
PubMed Link: 27320918
Variant Present in the following documents:
  • mmc7.pdf
View BVdb publication page



PPIM: A Protein-Protein Interaction Database for Maize.

Plant Physiology
Zhu, Guanghui G; Wu, Aibo A; Xu, Xin-Jian XJ; Xiao, Pei-Pei PP; Lu, Le L; Liu, Jingdong J; Cao, Yongwei Y; Chen, Luonan L; Wu, Jun J; Zhao, Xing-Ming XM
Publication Date: 2016-02

Variant appearance in text: SI: S288c
PubMed Link: 26620522
Variant Present in the following documents:
  • Main text
View BVdb publication page



Expansion of Interstitial Telomeric Sequences in Yeast.

Cell Reports
Aksenova, Anna Y AY; Han, Gil G; Shishkin, Alexander A AA; Volkov, Kirill V KV; Mirkin, Sergei M SM
Publication Date: 2015-11-24

Variant appearance in text: SI: S288C
PubMed Link: 26586439
Variant Present in the following documents:
  • Main text
View BVdb publication page



The mitochondrial monothiol glutaredoxin S15 is essential for iron-sulfur protein maturation in Arabidopsis thaliana.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Moseler, Anna A; Aller, Isabel I; Wagner, Stephan S; Nietzel, Thomas T; Przybyla-Toscano, Jonathan J; Mühlenhoff, Ulrich U; Lill, Roland R; Berndt, Carsten C; Rouhier, Nicolas N; Schwarzländer, Markus M; Meyer, Andreas J AJ
Publication Date: 2015-11-03

Variant appearance in text: SI: S288C
PubMed Link: 26483494
Variant Present in the following documents:
  • Main text
View BVdb publication page



Improved False Discovery Rate Estimation Procedure for Shotgun Proteomics.

Journal Of Proteome Research
Keich, Uri U; Kertesz-Farkas, Attila A; Noble, William Stafford WS
Publication Date: 2015-08-07

Variant appearance in text: SI: S288C
PubMed Link: 26152888
Variant Present in the following documents:
  • Main text
View BVdb publication page



Dot1 histone methyltransferases share a distributive mechanism but have highly diverged catalytic properties.

Scientific Reports
Stulemeijer, Iris J E IJ; De Vos, Dirk D; van Harten, Kirsten K; Joshi, Onkar K OK; Blomberg, Olga O; van Welsem, Tibor T; Terweij, Marit M; Vlaming, Hanneke H; de Graaf, Erik L EL; Altelaar, A F Maarten AF; Bakker, Barbara M BM; van Leeuwen, Fred F
Publication Date: 2015-05-12

Variant appearance in text: SI: S288C
PubMed Link: 25965993
Variant Present in the following documents:
  • Main text
View BVdb publication page



Characterizing the in vivo role of trehalose in Saccharomyces cerevisiae using the AGT1 transporter.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Gibney, Patrick A PA; Schieler, Ariel A; Chen, Jonathan C JC; Rabinowitz, Joshua D JD; Botstein, David D
Publication Date: 2015-05-12

Variant appearance in text: SI: S288C
PubMed Link: 25918382
Variant Present in the following documents:
  • Main text
View BVdb publication page



Protocols and programs for high-throughput growth and aging phenotyping in yeast.

Plos One
Jung, Paul P PP; Christian, Nils N; Kay, Daniel P DP; Skupin, Alexander A; Linster, Carole L CL
Publication Date: 2015

Variant appearance in text: SI: S288c
PubMed Link: 25822370
Variant Present in the following documents:
  • Main text
View BVdb publication page



Galactose metabolic genes in yeast respond to a ratio of galactose and glucose.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Escalante-Chong, Renan R; Savir, Yonatan Y; Carroll, Sean M SM; Ingraham, John B JB; Wang, Jue J; Marx, Christopher J CJ; Springer, Michael M
Publication Date: 2015-02-03

Variant appearance in text: SI: S288C
PubMed Link: 25605920
Variant Present in the following documents:
  • Main text
View BVdb publication page



SPoRE: a mathematical model to predict double strand breaks and axis protein sites in meiosis.

Bmc Bioinformatics
Champeimont, Raphaël R; Carbone, Alessandra A
Publication Date: 2014-12-11

Variant appearance in text: SI: S288C
PubMed Link: 25495332
Variant Present in the following documents:
  • Main text
  • 12859_2014_Article_391.pdf
View BVdb publication page



Threonine-4 of the budding yeast RNAP II CTD couples transcription with Htz1-mediated chromatin remodeling.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Rosonina, Emanuel E; Yurko, Nathan N; Li, Wencheng W; Hoque, Mainul M; Tian, Bin B; Manley, James L JL
Publication Date: 2014-08-19

Variant appearance in text: SI: S288C
PubMed Link: 25071213
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species.

Bmc Genomics
Gostinčar, Cene C; Ohm, Robin A RA; Kogej, Tina T; Sonjak, Silva S; Turk, Martina M; Zajc, Janja J; Zalar, Polona P; Grube, Martin M; Sun, Hui H; Han, James J; Sharma, Aditi A; Chiniquy, Jennifer J; Ngan, Chew Yee CY; Lipzen, Anna A; Barry, Kerrie K; Grigoriev, Igor V IV; Gunde-Cimerman, Nina N
Publication Date: 2014-07-01

Variant appearance in text: SI: S288C
PubMed Link: 24984952
Variant Present in the following documents:
  • Main text
View BVdb publication page