Publications:

SMAP is a pipeline for sample matching in proteogenomics.

Nature Communications

Li, Ling L; Niu, Mingming M; Erickson, Alyssa A; Luo, Jie J; Rowbotham, Kincaid K; Guo, Kai K; Huang, He H; Li, Yuxin Y; Jiang, Yi Y; Hur, Junguk J; Liu, Chunyu C; Peng, Junmin J; Wang, Xusheng X

Publication Date: 2022-02-08

Variant appearance in text: NICN1: H191R

PubMed Link: 35136070

Variant Present in the following documents:

• 41467_2022_28411_MOESM4_ESM.xlsx, sheet 1

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Distinctive mutational spectrum and karyotype disruption in long-term cisplatin-treated urothelial carcinoma cell lines.

Scientific Reports

Skowron, Margaretha A MA; Petzsch, Patrick P; Hardt, Karin K; Wagner, Nicholas N; Beier, Manfred M; Stepanow, Stefanie S; Drechsler, Matthias M; Rieder, Harald H; Köhrer, Karl K; Niegisch, Günter G; Hoffmann, Michèle J MJ; Schulz, Wolfgang A WA

Publication Date: 2019-10-09

Variant appearance in text: NICN1: H191R; rs61729946

PubMed Link: 31597922

Variant Present in the following documents:

• 41598_2019_50891_MOESM5_ESM.xlsx, sheet 1
• 41598_2019_50891_MOESM4_ESM.xlsx, sheet 1

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Molecular analysis of urothelial cancer cell lines for modeling tumor biology and drug response.

Oncogene

Nickerson, M L ML; Witte, N N; Im, K M KM; Turan, S S; Owens, C C; Misner, K K; Tsang, S X SX; Cai, Z Z; Wu, S S; Dean, M M; Costello, J C JC; Theodorescu, D D

Publication Date: 2017-01-05

Variant appearance in text: NICN1: H191R; rs61729946

PubMed Link: 27270441

Variant Present in the following documents:

• onc2016172x3.xls, sheet 3

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Pooled sequencing of 531 genes in inflammatory bowel disease identifies an associated rare variant in BTNL2 and implicates other immune related genes.

Plos Genetics

Prescott, Natalie J NJ; Lehne, Benjamin B; Stone, Kristina K; Lee, James C JC; Taylor, Kirstin K; Knight, Jo J; Papouli, Efterpi E; Mirza, Muddassar M MM; Simpson, Michael A MA; Spain, Sarah L SL; Lu, Grace G; Fraternali, Franca F; Bumpstead, Suzannah J SJ; Gray, Emma E; Amar, Ariella A; Bye, Hannah H; Green, Peter P; Chung-Faye, Guy G; Hayee, Bu'Hussain B; Pollok, Richard R; Satsangi, Jack J; Parkes, Miles M; Barrett, Jeffrey C JC; Mansfield, John C JC; Sanderson, Jeremy J; Lewis, Cathryn M CM; Weale, Michael E ME; Schlitt, Thomas T; Mathew, Christopher G CG; ,

Publication Date: 2015-02

Variant appearance in text: NICN1: H191R; rs61729946

PubMed Link: 25671699

Variant Present in the following documents:

• Main text
• pgen.1004955.pdf

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Whole-genome sequencing of the world's oldest people.

Plos One

Gierman, Hinco J HJ; Fortney, Kristen K; Roach, Jared C JC; Coles, Natalie S NS; Li, Hong H; Glusman, Gustavo G; Markov, Glenn J GJ; Smith, Justin D JD; Hood, Leroy L; Coles, L Stephen LS; Kim, Stuart K SK

Publication Date: 2014

Variant appearance in text: NICN1: H191R; rs61729946

PubMed Link: 25390934

Variant Present in the following documents:

• pone.0112430.s004.xlsx, sheet 1

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