Publications:

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Comprehensive proteogenomic characterization of early duodenal cancer reveals the carcinogenesis tracks of different subtypes.

Nature Communications

Li, Lingling L; Jiang, Dongxian D; Liu, Hui H; Guo, Chunmei C; Zhao, Rui R; Zhang, Qiao Q; Xu, Chen C; Qin, Zhaoyu Z; Feng, Jinwen J; Liu, Yang Y; Wang, Haixing H; Chen, Weijie W; Zhang, Xue X; Li, Bin B; Bai, Lin L; Tian, Sha S; Tan, Subei S; Yu, Zixiang Z; Chen, Lingli L; Huang, Jie J; Zhao, Jian-Yuan JY; Hou, Yingyong Y; Ding, Chen C

Publication Date: 2023-03-29

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 36991000

Variant Present in the following documents:

• 41467_2023_37221_MOESM5_ESM.xlsx, sheet 3

View BVdb publication page

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Integrative proteogenomic characterization of early esophageal cancer.

Nature Communications

Li, Lingling L; Jiang, Dongxian D; Zhang, Qiao Q; Liu, Hui H; Xu, Fujiang F; Guo, Chunmei C; Qin, Zhaoyu Z; Wang, Haixing H; Feng, Jinwen J; Liu, Yang Y; Chen, Weijie W; Zhang, Xue X; Bai, Lin L; Tian, Sha S; Tan, Subei S; Xu, Chen C; Song, Qi Q; Liu, Yalan Y; Zhong, Yunshi Y; Chen, Tianyin T; Zhou, Pinghong P; Zhao, Jian-Yuan JY; Hou, Yingyong Y; Ding, Chen C

Publication Date: 2023-03-25

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 36966136

Variant Present in the following documents:

• 41467_2023_37440_MOESM4_ESM.xlsx, sheet 2

View BVdb publication page

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Genetic changes in refractory relapsed acute myeloid leukemia with NPM1 mutation: A case report.

World Journal Of Clinical Cases

Wang, Shuang-Ling SL

Publication Date: 2022-12-16

Variant appearance in text: TET2: 652G>A; V218M

PubMed Link: 36569004

Variant Present in the following documents:

• WJCC-10-13058.pdf

View BVdb publication page

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Molecular Profiling of Kenyan Acute Myeloid Leukemia Patients.

Frontiers In Genetics

Gatua, Mercy M; Navari, Mohsen M; Ong'ondi, Matilda M; Onyango, Noel N; Kaggia, Serah S; Rogena, Emily E; Visani, Giuseppe G; Abinya, Nicholas A NA; Piccaluga, Pier Paolo PP

Publication Date: 2022

Variant appearance in text: TET2: 652G>A; V218M

PubMed Link: 35836575

Variant Present in the following documents:

• DataSheet1.xlsx, sheet 2

View BVdb publication page

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Pedigree investigation, clinical characteristics, and prognosis analysis of haematological disease patients with germline TET2 mutation.

Bmc Cancer

Wu, Xia X; Deng, Jili J; Zhang, Nanchen N; Liu, Xiaoyan X; Zheng, Xue X; Yan, Tianyou T; Ye, Wu W; Gong, Yuping Y

Publication Date: 2022-03-12

Variant appearance in text: TET2: 652G>A; Val218Met; rs6843141

PubMed Link: 35279121

Variant Present in the following documents:

• 12885_2022_9347_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

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Characterization of disease-propagating stem cells responsible for myeloproliferative neoplasm-blast phase.

Jci Insight

Wang, Xiaoli X; Rampal, Raajit K RK; Hu, Cing Siang CS; Tripodi, Joseph J; Farnoud, Noushin N; Petersen, Bruce B; Rossi, Michael R MR; Patel, Minal M; McGovern, Erin E; Najfeld, Vesna V; Iancu-Rubin, Camelia C; Lu, Min M; Davis, Andrew A; Kremyanskaya, Marina M; Weinberg, Rona Singer RS; Mascarenhas, John J; Hoffman, Ronald R

Publication Date: 2022-04-22

Variant appearance in text: TET2: V218M

PubMed Link: 35259128

Variant Present in the following documents:

• jciinsight-7-156534-s067.xlsx, sheet 1

View BVdb publication page

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Response prediction in patients with gastric and esophagogastric adenocarcinoma under neoadjuvant chemotherapy using targeted gene expression analysis and next-generation sequencing in pre-therapeutic biopsies.

Journal Of Cancer Research And Clinical Oncology

Kleo, Karsten K; Jovanovic, Vladimir M VM; Arndold, Alexander A; Lehmann, Annika A; Lammert, Hedwig H; Berg, Erika E; Harloff, Hannah H; Treese, Christoph C; Hummel, Michael M; Daum, Severin S

Publication Date: 2022-03-05

Variant appearance in text: TET2: 652G>A; Val218Met; rs6843141

PubMed Link: 35246724

Variant Present in the following documents:

• 432_2022_3944_MOESM1_ESM.xlsx, sheet 1

View BVdb publication page

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Multifocal Organoid Capturing of Colon Cancer Reveals Pervasive Intratumoral Heterogenous Drug Responses.

Advanced Science (Weinheim, Baden-Wurttemberg, Germany)

Kim, Soon-Chan SC; Park, Ji Won JW; Seo, Ha-Young HY; Kim, Minjung M; Park, Jae-Hyeon JH; Kim, Ga-Hye GH; Lee, Ja Oh JO; Shin, Young-Kyoung YK; Bae, Jeong Mo JM; Koo, Bon-Kyoung BK; Jeong, Seung-Yong SY; Ku, Ja-Lok JL

Publication Date: 2022-02

Variant appearance in text: TET2: 652G>A; V218M

PubMed Link: 34918496

Variant Present in the following documents:

• ADVS-9-2103360-s007.xlsx, sheet 3

View BVdb publication page

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MicroSEC filters sequence errors for formalin-fixed and paraffin-embedded samples.

Communications Biology

Ikegami, Masachika M; Kohsaka, Shinji S; Hirose, Takeshi T; Ueno, Toshihide T; Inoue, Satoshi S; Kanomata, Naoki N; Yamauchi, Hideko H; Mori, Taisuke T; Sekine, Shigeki S; Inamoto, Yoshihiro Y; Yatabe, Yasushi Y; Kobayashi, Hiroshi H; Tanaka, Sakae S; Mano, Hiroyuki H

Publication Date: 2021-12-15

Variant appearance in text: TET2: 652G>A; Val218Met

PubMed Link: 34912045

Variant Present in the following documents:

• 42003_2021_2930_MOESM4_ESM.xlsx, sheet 2

View BVdb publication page

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MicroSEC filters sequence errors for formalin-fixed and paraffin-embedded samples.

Communications Biology

Ikegami, Masachika M; Kohsaka, Shinji S; Hirose, Takeshi T; Ueno, Toshihide T; Inoue, Satoshi S; Kanomata, Naoki N; Yamauchi, Hideko H; Mori, Taisuke T; Sekine, Shigeki S; Inamoto, Yoshihiro Y; Yatabe, Yasushi Y; Kobayashi, Hiroshi H; Tanaka, Sakae S; Mano, Hiroyuki H

Publication Date: 2021-12-15

Variant appearance in text: TET2: 652G>A; Val218Met

PubMed Link: 34912045

Variant Present in the following documents:

• 42003_2021_2930_MOESM4_ESM.xlsx, sheet 2

View BVdb publication page

---

Utility of plasma cell-free DNA for de novo detection and quantification of clonal hematopoiesis.

Haematologica

Gutierrez-Rodrigues, Fernanda F; Beerman, Isabel I; Groarke, Emma M EM; Patel, Bhavisha A BA; Spitofsky, Nina N; Dillon, Laura W LW; Raffo, Diego Quinones DQ; Hourigan, Christopher S CS; Kajigaya, Sachiko S; Ferrucci, Luigi L; Young, Neal S NS

Publication Date: 2022-08-01

Variant appearance in text: TET2: 652G>A

PubMed Link: 34587721

Variant Present in the following documents:

• 2021_279230_GUTIERREZ-RODRIGUES_SUPPL.pdf

View BVdb publication page

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TET2 mutations in acute myeloid leukemia: a comprehensive study in patients of Sindh, Pakistan.

Peerj

Shaikh, Abdul Rehman Khalil ARK; Ujjan, Ikram I; Irfan, Muhammad M; Naz, Arshi A; Shamsi, Tahir T; Khan, Muhammad Tariq Masood MTM; Shakeel, Muhammad M

Publication Date: 2021

Variant appearance in text: rs6843141

PubMed Link: 33643703

Variant Present in the following documents:

• Main text
• peerj-09-10678.pdf

View BVdb publication page

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Correlation of mutational landscape and survival outcome of peripheral T-cell lymphomas.

Experimental Hematology & Oncology

Ye, Yingying Y; Ding, Ning N; Mi, Lan L; Shi, Yunfei Y; Liu, Weiping W; Song, Yuqin Y; Shu, Shaokun S; Zhu, Jun J

Publication Date: 2021-02-05

Variant appearance in text: TET2: 652G>A; V218M

PubMed Link: 33546774

Variant Present in the following documents:

• 40164_2021_200_MOESM2_ESM.xlsx, sheet 1

View BVdb publication page

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Patient-derived organoids in cellulosic sponge model chemotherapy response of metastatic colorectal cancer.

Clinical And Translational Medicine

Xu, Yanjie Y; Chen, Jianjun J; Huang, Yizhou Y; Luo, Yang Y; Hsieh, An-Chih AC; Chen, Jianyi J; Li, Han H; Wei, Xunbin X; Gao, Wei-Qiang WQ; Zhong, Ming M; Zhang, Yan Y

Publication Date: 2021-01

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 33463056

Variant Present in the following documents:

• CTM2-11-e285-s003.xlsx, sheet 23
• CTM2-11-e285-s003.xlsx, sheet 13
• CTM2-11-e285-s003.xlsx, sheet 22

View BVdb publication page

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Multi Cytogenetic Changes in a Patient as Co-Existing MDS and CLL Progresses.

Oncotargets And Therapy

Li, Xiangxin X; Ma, Jiale J; Wang, Luqun L; Yan, Shuxin S; Li, Fanglin F; Wang, Lingling L; Wang, Lin L; Li, Guosheng G; Ma, Daoxin D; Li, Hao H

Publication Date: 2021

Variant appearance in text: TET2: V218M

PubMed Link: 33447059

Variant Present in the following documents:

• Main text
• ott-14-177.pdf

View BVdb publication page

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Analysis of Circulating Tumor DNA to Predict Neoadjuvant Therapy Effectiveness and Breast Cancer Recurrence.

Journal Of Breast Cancer

Hao, Shuai S; Tian, Wuguo W; Zhao, Jianjie J; Chen, Yi Y; Zhang, Xiaohua X; Gao, Bo B; He, Yujun Y; Luo, Donglin D

Publication Date: 2020-08

Variant appearance in text: TET2: 652G>A; V218M; rs6843141

PubMed Link: 32908788

Variant Present in the following documents:

• jbc-23-373-s004.xls, sheet 1

View BVdb publication page

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SET Domain Containing 2 Deficiency in Myelodysplastic Syndrome.

Frontiers In Genetics

Li, Jiaming J; Peng, Zhenping Z; Luo, Fangxiu F; Chen, Yu Y

Publication Date: 2020

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 32849799

Variant Present in the following documents:

• Presentation_1.pdf

View BVdb publication page

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Durable benefit from immunotherapy and accompanied lupus erythematosus in pancreatic adenocarcinoma with DNA repair deficiency.

Journal For Immunotherapy Of Cancer

Pang, Xionghao X; Qian, Juanjuan J; Jin, Hua H; Zhang, Lei L; Lin, Lin L; Wang, Yuli Y; Lei, Yi Y; Zhou, Zeqiang Z; Li, Meixiang M; Zhang, Henghui H

Publication Date: 2020-07

Variant appearance in text: TET2: 652G>A; V218M

PubMed Link: 32636238

Variant Present in the following documents:

• jitc-2019-000463supp001.pdf

View BVdb publication page

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TET2 Single Nucleotide Polymorphism in Myeloid Neoplasms Among Egyptian Patients.

Indian Journal Of Hematology & Blood Transfusion : An Official Journal Of Indian Society Of Hematology And Blood Transfusion

Dammag, Enas A EA; Hamed, Nahla A M NAM; Elhalawani, Nabil A NA; Kassem, Heba S HS; Ayad, Mona W MW

Publication Date: 2020-01

Variant appearance in text: TET2: V218M

PubMed Link: 32158090

Variant Present in the following documents:

• Main text

View BVdb publication page

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AMLVaran: a software approach to implement variant analysis of targeted NGS sequencing data in an oncological care setting.

Bmc Medical Genomics

Wünsch, Christian C; Banck, Henrik H; Müller-Tidow, Carsten C; Dugas, Martin M

Publication Date: 2020-02-04

Variant appearance in text: TET2: 652G>A; V218M; rs6843141

PubMed Link: 32019565

Variant Present in the following documents:

• 12920_2020_668_MOESM5_ESM.xls, sheet 1
• 12920_2020_668_MOESM8_ESM.xls, sheet 1
• 12920_2020_668_MOESM7_ESM.xls, sheet 1
• 12920_2020_668_MOESM6_ESM.xls, sheet 1

View BVdb publication page

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Features of non-activation dendritic state and immune deficiency in blastic plasmacytoid dendritic cell neoplasm (BPDCN).

Blood Cancer Journal

Beird, Hannah C HC; Khan, Maliha M; Wang, Feng F; Alfayez, Mansour M; Cai, Tianyu T; Zhao, Li L; Khoury, Joseph J; Futreal, P Andrew PA; Konopleva, Marina M; Pemmaraju, Naveen N

Publication Date: 2019-12-06

Variant appearance in text: rs6843141

PubMed Link: 31811114

Variant Present in the following documents:

• 41408_2019_262_MOESM2_ESM.xlsx, sheet 5

View BVdb publication page

---

Gene mutation profile and risk stratification in AML1‑ETO‑positive acute myeloid leukemia based on next‑generation sequencing.

Oncology Reports

Yu, Guopan G; Yin, Changxin C; Wu, Fuqun F; Jiang, Ling L; Zheng, Zhongxin Z; Xu, Dan D; Zhou, Jiaheng J; Jiang, Xuejie X; Liu, Qifa Q; Meng, Fanyi F

Publication Date: 2019-12

Variant appearance in text: TET2: 652G>A

PubMed Link: 31638252

Variant Present in the following documents:

• Supplementary_Data.pdf

View BVdb publication page

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TET2 missense variants in human neoplasia. A proposal of structural and functional classification.

Molecular Genetics & Genomic Medicine

Bussaglia, Elena E; Antón, Rosa R; Nomdedéu, Josep F JF; Fuentes-Prior, Pablo P

Publication Date: 2019-07

Variant appearance in text: TET2: 652G>A; Val218Met; rs6843141

PubMed Link: 31187595

Variant Present in the following documents:

View BVdb publication page

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A reference collection of patient-derived cell line and xenograft models of proneural, classical and mesenchymal glioblastoma.

Scientific Reports

Stringer, Brett W BW; Day, Bryan W BW; D'Souza, Rochelle C J RCJ; Jamieson, Paul R PR; Ensbey, Kathleen S KS; Bruce, Zara C ZC; Lim, Yi Chieh YC; Goasdoué, Kate K; Offenhäuser, Carolin C; Akgül, Seçkin S; Allan, Suzanne S; Robertson, Thomas T; Lucas, Peter P; Tollesson, Gert G; Campbell, Scott S; Winter, Craig C; Do, Hongdo H; Dobrovic, Alexander A; Inglis, Po-Ling PL; Jeffree, Rosalind L RL; Johns, Terrance G TG; Boyd, Andrew W AW

Publication Date: 2019-03-20

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 30894629

Variant Present in the following documents:

• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 4

View BVdb publication page

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Organoids as a new model for improving regenerative medicine and cancer personalized therapy in renal diseases.

Cell Death & Disease

Grassi, Ludovica L; Alfonsi, Romina R; Francescangeli, Federica F; Signore, Michele M; De Angelis, Maria Laura ML; Addario, Antonio A; Costantini, Manuela M; Flex, Elisabetta E; Ciolfi, Andrea A; Pizzi, Simone S; Bruselles, Alessandro A; Pallocca, Matteo M; Simone, Giuseppe G; Haoui, Mustapha M; Falchi, Mario M; Milella, Michele M; Sentinelli, Steno S; Di Matteo, Paola P; Stellacci, Emilia E; Gallucci, Michele M; Muto, Giovanni G; Tartaglia, Marco M; De Maria, Ruggero R; Bonci, Désirée D

Publication Date: 2019-02-27

Variant appearance in text: rs6843141

PubMed Link: 30814510

Variant Present in the following documents:

• 41419_2019_1453_MOESM27_ESM.xlsx, sheet 3

View BVdb publication page

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Myelodysplastic syndrome progression to acute myeloid leukemia at the stem cell level.

Nature Medicine

Chen, Jiahao J; Kao, Yun-Ruei YR; Sun, Daqian D; Todorova, Tihomira I TI; Reynolds, David D; Narayanagari, Swathi-Rao SR; Montagna, Cristina C; Will, Britta B; Verma, Amit A; Steidl, Ulrich U

Publication Date: 2019-01

Variant appearance in text: TET2: 652G>A; Val218Met

PubMed Link: 30510255

Variant Present in the following documents:

• NIHMS1510456-supplement-Sup_Table_3.xlsx, sheet 1

View BVdb publication page

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SNIP1 Recruits TET2 to Regulate c-MYC Target Genes and Cellular DNA Damage Response.

Cell Reports

Chen, Lei-Lei LL; Lin, Huai-Peng HP; Zhou, Wen-Jie WJ; He, Chen-Xi CX; Zhang, Zhi-Yong ZY; Cheng, Zhou-Li ZL; Song, Jun-Bin JB; Liu, Peng P; Chen, Xin-Yu XY; Xia, Yu-Kun YK; Chen, Xiu-Fei XF; Sun, Ren-Qiang RQ; Zhang, Jing-Ye JY; Sun, Yi-Ping YP; Song, Lei L; Liu, Bing-Jie BJ; Du, Rui-Kai RK; Ding, Chen C; Lan, Fei F; Huang, Sheng-Lin SL; Zhou, Feng F; Liu, Suling S; Xiong, Yue Y; Ye, Dan D; Guan, Kun-Liang KL

Publication Date: 2018-11-06

Variant appearance in text: TET2: V218M

PubMed Link: 30404004

Variant Present in the following documents:

• NIHMS1512145-supplement-3.xlsx, sheet 1

View BVdb publication page

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Genetic Evidence Supporting the Role of the Calcium Channel, CACNA1S, in Tooth Cusp and Root Patterning.

Frontiers In Physiology

Laugel-Haushalter, Virginie V; Morkmued, Supawich S; Stoetzel, Corinne C; Geoffroy, Véronique V; Muller, Jean J; Boland, Anne A; Deleuze, Jean-François JF; Chennen, Kirsley K; Pitiphat, Waranuch W; Dollfus, Hélène H; Niederreither, Karen K; Bloch-Zupan, Agnès A; Pungchanchaikul, Patimaporn P

Publication Date: 2018

Variant appearance in text: TET2: 652G>A; Val218Met; rs6843141

PubMed Link: 30319441

Variant Present in the following documents:

• Table_6.xlsx, sheet 1

View BVdb publication page

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Tumorigenicity-associated characteristics of human iPS cell lines.

Plos One

Yasuda, Satoshi S; Kusakawa, Shinji S; Kuroda, Takuya T; Miura, Takumi T; Tano, Keiko K; Takada, Nozomi N; Matsuyama, Satoko S; Matsuyama, Akifumi A; Nasu, Michiyo M; Umezawa, Akihiro A; Hayakawa, Takao T; Tsutsumi, Hideki H; Sato, Yoji Y

Publication Date: 2018

Variant appearance in text: TET2: V218M

PubMed Link: 30286143

Variant Present in the following documents:

• pone.0205022.s007.xlsx, sheet 1

View BVdb publication page

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appreci8: a pipeline for precise variant calling integrating 8 tools.

Bioinformatics (Oxford, England)

Sandmann, Sarah S; Karimi, Mohsen M; de Graaf, Aniek O AO; Rohde, Christian C; Göllner, Stefanie S; Varghese, Julian J; Ernsting, Jan J; Walldin, Gunilla G; van der Reijden, Bert A BA; Müller-Tidow, Carsten C; Malcovati, Luca L; Hellström-Lindberg, Eva E; Jansen, Joop H JH; Dugas, Martin M

Publication Date: 2018-12-15

Variant appearance in text: TET2: 652G>A; Val218Met; rs6843141

PubMed Link: 29945233

Variant Present in the following documents:

• bty518_supplementary_data_s6.xlsx, sheet 3
• bty518_supplementary_data_s2.xlsx, sheet 3
• bty518_supplementary_data_s3.xlsx, sheet 3
• bty518_supplementary_data_s1.xlsx, sheet 3
• bty518_supplementary_data_s3.xlsx, sheet 9
• bty518_supplementary_data_s5.xlsx, sheet 8
• bty518_supplementary_data_s10.xlsx, sheet 3
• bty518_supplementary_data_s4.xlsx, sheet 3
• bty518_supplementary_data_s3.xlsx, sheet 8
• bty518_supplementary_data_s5.xlsx, sheet 6
• bty518_supplementary_data_s5.xlsx, sheet 3
• bty518_supplementary_data_s7.xlsx, sheet 3

View BVdb publication page

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Targetable vulnerabilities in T- and NK-cell lymphomas identified through preclinical models.

Nature Communications

Ng, Samuel Y SY; Yoshida, Noriaki N; Christie, Amanda L AL; Ghandi, Mahmoud M; Dharia, Neekesh V NV; Dempster, Joshua J; Murakami, Mark M; Shigemori, Kay K; Morrow, Sara N SN; Van Scoyk, Alexandria A; Cordero, Nicolas A NA; Stevenson, Kristen E KE; Puligandla, Maneka M; Haas, Brian B; Lo, Christopher C; Meyers, Robin R; Gao, Galen G; Cherniack, Andrew A; Louissaint, Abner A; Nardi, Valentina V; Thorner, Aaron R AR; Long, Henry H; Qiu, Xintao X; Morgan, Elizabeth A EA; Dorfman, David M DM; Fiore, Danilo D; Jang, Julie J; Epstein, Alan L AL; Dogan, Ahmet A; Zhang, Yanming Y; Horwitz, Steven M SM; Jacobsen, Eric D ED; Santiago, Solimar S; Ren, Jian-Guo JG; Guerlavais, Vincent V; Annis, D Allen DA; Aivado, Manuel M; Saleh, Mansoor N MN; Mehta, Amitkumar A; Tsherniak, Aviad A; Root, David D; Vazquez, Francisca F; Hahn, William C WC; Inghirami, Giorgio G; Aster, Jon C JC; Weinstock, David M DM; Koch, Raphael R

Publication Date: 2018-05-22

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 29789628

Variant Present in the following documents:

• 41467_2018_4356_MOESM12_ESM.xlsx, sheet 1

View BVdb publication page

---

Spatial Tissue Proteomics Quantifies Inter- and Intratumor Heterogeneity in Hepatocellular Carcinoma (HCC).

Molecular & Cellular Proteomics : Mcp

Buczak, Katarzyna K; Ori, Alessandro A; Kirkpatrick, Joanna M JM; Holzer, Kerstin K; Dauch, Daniel D; Roessler, Stephanie S; Endris, Volker V; Lasitschka, Felix F; Parca, Luca L; Schmidt, Alexander A; Zender, Lars L; Schirmacher, Peter P; Krijgsveld, Jeroen J; Singer, Stephan S; Beck, Martin M

Publication Date: 2018-04

Variant appearance in text: TET2: Val218Met; rs6843141

PubMed Link: 29363612

Variant Present in the following documents:

• supp_RA117.000189_4790_2_supp_58832_p2t92h.xlsx, sheet 1

View BVdb publication page

---

Development and validation of a whole-exome sequencing test for simultaneous detection of point mutations, indels and copy-number alterations for precision cancer care.

Npj Genomic Medicine

Rennert, Hanna H; Eng, Kenneth K; Zhang, Tuo T; Tan, Adrian A; Xiang, Jenny J; Romanel, Alessandro A; Kim, Robert R; Tam, Wayne W; Liu, Yen-Chun YC; Bhinder, Bhavneet B; Cyrta, Joanna J; Beltran, Himisha H; Robinson, Brian B; Mosquera, Juan Miguel JM; Fernandes, Helen H; Demichelis, Francesca F; Sboner, Andrea A; Kluk, Michael M; Rubin, Mark A MA; Elemento, Olivier O

Publication Date: 2016

Variant appearance in text: TET2: V218M

PubMed Link: 28781886

Variant Present in the following documents:

• npjgenmed201619-s3.pdf

View BVdb publication page

---

Dysfunction of the WT1-MEG3 signaling promotes AML leukemogenesis via p53-dependent and -independent pathways.

Leukemia

Lyu, Y Y; Lou, J J; Yang, Y Y; Feng, J J; Hao, Y Y; Huang, S S; Yin, L L; Xu, J J; Huang, D D; Ma, B B; Zou, D D; Wang, Y Y; Zhang, Y Y; Zhang, B B; Chen, P P; Yu, K K; Lam, E W-F EW; Wang, X X; Liu, Q Q; Yan, J J; Jin, B B

Publication Date: 2017-12

Variant appearance in text: TET2: V218M

PubMed Link: 28400619

Variant Present in the following documents:

• Main text
• leu2017116a.pdf

View BVdb publication page

---

Genetic hierarchy and temporal variegation in the clonal history of acute myeloid leukaemia.

Nature Communications

Hirsch, Pierre P; Zhang, Yanyan Y; Tang, Ruoping R; Joulin, Virginie V; Boutroux, Hélène H; Pronier, Elodie E; Moatti, Hannah H; Flandrin, Pascale P; Marzac, Christophe C; Bories, Dominique D; Fava, Fanny F; Mokrani, Hayat H; Betems, Aline A; Lorre, Florence F; Favier, Rémi R; Féger, Frédéric F; Mohty, Mohamad M; Douay, Luc L; Legrand, Ollivier O; Bilhou-Nabera, Chrystèle C; Louache, Fawzia F; Delhommeau, François F

Publication Date: 2016-08-18

Variant appearance in text: TET2: 652G>A; V218M; rs6843141

PubMed Link: 27534895

Variant Present in the following documents:

• ncomms12475-s2.xlsx, sheet 1
• ncomms12475-s3.xlsx, sheet 1

View BVdb publication page

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The chronological sequence of somatic mutations in early gastric carcinogenesis inferred from multiregion sequencing of gastric adenomas.

Oncotarget

Lim, Chul-Hyun CH; Cho, Yu Kyung YK; Kim, Sang Woo SW; Choi, Myung-Gyu MG; Rhee, Je-Keun JK; Chung, Yeun-Jun YJ; Lee, Sug-Hyung SH; Kim, Tae-Min TM

Publication Date: 2016-06-28

Variant appearance in text: TET2: V218M

PubMed Link: 27175599

Variant Present in the following documents:

• oncotarget-07-39758-s006.xlsx, sheet 1

View BVdb publication page

---

Aberrant activation of the PI3K/mTOR pathway promotes resistance to sorafenib in AML.

Oncogene

Lindblad, O O; Cordero, E E; Puissant, A A; Macaulay, L L; Ramos, A A; Kabir, N N NN; Sun, J J; Vallon-Christersson, J J; Haraldsson, K K; Hemann, M T MT; Borg, Å Å; Levander, F F; Stegmaier, K K; Pietras, K K; Rönnstrand, L L; Kazi, J U JU

Publication Date: 2016-09-29

Variant appearance in text: TET2: V218M

PubMed Link: 26999641

Variant Present in the following documents:

• Main text

View BVdb publication page

---

Low Ten-eleven-translocation 2 (TET2) transcript level is independent of TET2 mutation in patients with myeloid neoplasms.

Diagnostic Pathology

Scopim-Ribeiro, Renata R; Machado-Neto, João Agostinho JA; de Melo Campos, Paula P; Niemann, Fernanda Soares FS; Lorand-Metze, Irene I; Costa, Fernando Ferreira FF; Olalla Saad, Sara Teresinha ST; Traina, Fabiola F

Publication Date: 2016-03-16

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 26984174

Variant Present in the following documents:

• Main text
• 13000_2016_Article_476.pdf

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Reproducible Analysis of Post-Translational Modifications in Proteomes--Application to Human Mutations.

Plos One

Holehouse, Alex S AS; Naegle, Kristen M KM

Publication Date: 2015

Variant appearance in text: rs6843141

PubMed Link: 26659599

Variant Present in the following documents:

• pone.0144692.s002.xlsx, sheet 1

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Genetic Characterization of Ten-Eleven-Translocation Methylcytosine Dioxygenase Alterations in Human Glioma.

Journal Of Cancer

Kraus, Theo F J TF; Greiner, Andrea A; Steinmaurer, Martina M; Dietinger, Vanessa V; Guibourt, Virginie V; Kretzschmar, Hans A HA

Publication Date: 2015

Variant appearance in text: TET2: V218M

PubMed Link: 26284134

Variant Present in the following documents:

• Main text

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GESPA: classifying nsSNPs to predict disease association.

Bmc Bioinformatics

Khurana, Jay K JK; Reeder, Jay E JE; Shrimpton, Antony E AE; Thakar, Juilee J

Publication Date: 2015-07-25

Variant appearance in text: TET2: V218M

PubMed Link: 26206375

Variant Present in the following documents:

• 12859_2015_673_MOESM1_ESM.xls, sheet 4

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Ethnic variation of TET2 SNP rs2454206 and association with clinical outcome in childhood AML: a report from the Children's Oncology Group.

Leukemia

Kutny, M A MA; Alonzo, T A TA; Gamazon, E R ER; Gerbing, R B RB; Geraghty, D D; Lange, B B; Heerema, N A NA; Sung, L L; Aplenc, R R; Franklin, J J; Raimondi, S C SC; Hirsch, B A BA; Konkashbaev, A A; Cox, N J NJ; Onel, K K; Gamis, A S AS; Meshinchi, S S

Publication Date: 2015-12

Variant appearance in text: rs6843141

PubMed Link: 26126966

Variant Present in the following documents:

• NIHMS692629-supplement-1.pdf

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Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes.

Oncotarget

Keerthikumar, Shivakumar S; Gangoda, Lahiru L; Liem, Michael M; Fonseka, Pamali P; Atukorala, Ishara I; Ozcitti, Cemil C; Mechler, Adam A; Adda, Christopher G CG; Ang, Ching-Seng CS; Mathivanan, Suresh S

Publication Date: 2015-06-20

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 25944692

Variant Present in the following documents:

• oncotarget-06-15375-s005.xlsx, sheet 2

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Exome sequencing of case-unaffected-parents trios reveals recessive and de novo genetic variants in sporadic ALS.

Scientific Reports

Steinberg, Karyn Meltz KM; Yu, Bing B; Koboldt, Daniel C DC; Mardis, Elaine R ER; Pamphlett, Roger R

Publication Date: 2015-03-16

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 25773295

Variant Present in the following documents:

• srep09124-s3.xls, sheet 1

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Whole-genome sequencing of the world's oldest people.

Plos One

Gierman, Hinco J HJ; Fortney, Kristen K; Roach, Jared C JC; Coles, Natalie S NS; Li, Hong H; Glusman, Gustavo G; Markov, Glenn J GJ; Smith, Justin D JD; Hood, Leroy L; Coles, L Stephen LS; Kim, Stuart K SK

Publication Date: 2014

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 25390934

Variant Present in the following documents:

• pone.0112430.s004.xlsx, sheet 1

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The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data.

Nucleic Acids Research

Tang, Xiaojia X; Baheti, Saurabh S; Shameer, Khader K; Thompson, Kevin J KJ; Wills, Quin Q; Niu, Nifang N; Holcomb, Ilona N IN; Boutet, Stephane C SC; Ramakrishnan, Ramesh R; Kachergus, Jennifer M JM; Kocher, Jean-Pierre A JP; Weinshilboum, Richard M RM; Wang, Liewei L; Thompson, E Aubrey EA; Kalari, Krishna R KR

Publication Date: 2014-12-16

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 25352556

Variant Present in the following documents:

• supp_gku1005_nar-01266-met-n-2014-File012.xlsx, sheet 19

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Germline variation in cancer-susceptibility genes in a healthy, ancestrally diverse cohort: implications for individual genome sequencing.

Plos One

Bodian, Dale L DL; McCutcheon, Justine N JN; Kothiyal, Prachi P; Huddleston, Kathi C KC; Iyer, Ramaswamy K RK; Vockley, Joseph G JG; Niederhuber, John E JE

Publication Date: 2014

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 24728327

Variant Present in the following documents:

• pone.0094554.s002.xlsx, sheet 1
• pone.0094554.s002.xlsx, sheet 3

View BVdb publication page

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TET2 overexpression in chronic lymphocytic leukemia is unrelated to the presence of TET2 variations.

Biomed Research International

Hernández-Sánchez, María M; Rodríguez, Ana Eugenia AE; Kohlmann, Alexander A; Benito, Rocío R; García, Juan Luis JL; Risueño, Alberto A; Fermiñán, Encarna E; De Las Rivas, Javier J; González, Marcos M; Hernández-Rivas, Jesús-María JM

Publication Date: 2014

Variant appearance in text: TET2: Val218Met; rs6843141

PubMed Link: 24693539

Variant Present in the following documents:

• Main text
• BMRI2014-814294.pdf

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Effect of a poly(ADP-ribose) polymerase-1 inhibitor against esophageal squamous cell carcinoma cell lines.

Cancer Science

Nasuno, Tomomitsu T; Mimaki, Sachiyo S; Okamoto, Makito M; Esumi, Hiroyasu H; Tsuchihara, Katsuya K

Publication Date: 2014-02

Variant appearance in text: TET2: V218M; rs6843141

PubMed Link: 24219164

Variant Present in the following documents:

• cas0105-0202-SD3.xlsx, sheet 1

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Clonal leukemic evolution in myelodysplastic syndromes with TET2 and IDH1/2 mutations.

Haematologica

Lin, Tung-Liang TL; Nagata, Yasunobu Y; Kao, Hsiao-Wen HW; Sanada, Masashi M; Okuno, Yusuke Y; Huang, Chein-Fuang CF; Liang, Der-Cherng DC; Kuo, Ming-Chung MC; Lai, Chang-Liang CL; Lee, En-Hui EH; Shih, Yu-Shu YS; Tanaka, Hiroko H; Shiraishi, Yuichi Y; Chiba, Kenichi K; Lin, Tung-Huei TH; Wu, Jin-Hou JH; Miyano, Satoru S; Ogawa, Seishi S; Shih, Lee-Yung LY

Publication Date: 2014-01

Variant appearance in text: TET2: V218M

PubMed Link: 23996483

Variant Present in the following documents:

• Main text

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