Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: GC: 604G>C

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

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Clonal dynamics of haematopoiesis across the human lifespan.

Nature

Mitchell, Emily E; Spencer Chapman, Michael M; Williams, Nicholas N; Dawson, Kevin J KJ; Mende, Nicole N; Calderbank, Emily F EF; Jung, Hyunchul H; Mitchell, Thomas T; Coorens, Tim H H THH; Spencer, David H DH; Machado, Heather H; Lee-Six, Henry H; Davies, Megan M; Hayler, Daniel D; Fabre, Margarete A MA; Mahbubani, Krishnaa K; Abascal, Federico F; Cagan, Alex A; Vassiliou, George S GS; Baxter, Joanna J; Martincorena, Inigo I; Stratton, Michael R MR; Kent, David G DG; Chatterjee, Krishna K; Parsy, Kourosh Saeb KS; Green, Anthony R AR; Nangalia, Jyoti J; Laurenti, Elisa E; Campbell, Peter J PJ

Publication Date: 2022-06

Variant appearance in text: GC: E202Q

PubMed Link: 35650442

Variant Present in the following documents:

• 41586_2022_4786_MOESM11_ESM.xlsx, sheet 1

View BVdb publication page

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New Sequence Type ST3449 in Multidrug-Resistant Pseudomonas aeruginosa Isolates from a Cystic Fibrosis Patient.

Antibiotics (Basel, Switzerland)

Díaz-Ríos, Catalina C; Hernández, Marta M; Abad, David D; Álvarez-Montes, Laura L; Varsaki, Athanasia A; Iturbe, David D; Calvo, Jorge J; Ocampo-Sosa, Alain A AA

Publication Date: 2021-04-23

Variant appearance in text: GC: E202Q

PubMed Link: 33922748

Variant Present in the following documents:

• Main text

View BVdb publication page

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Integrated genomic analysis reveals mutated ELF3 as a potential gallbladder cancer vaccine candidate.

Nature Communications

Pandey, Akhilesh A; Stawiski, Eric W EW; Durinck, Steffen S; Gowda, Harsha H; Goldstein, Leonard D LD; Barbhuiya, Mustafa A MA; Schröder, Markus S MS; Sreenivasamurthy, Sreelakshmi K SK; Kim, Sun-Whe SW; Phalke, Sameer S; Suryamohan, Kushal K; Lee, Kayla K; Chakraborty, Papia P; Kode, Vasumathi V; Shi, Xiaoshan X; Chatterjee, Aditi A; Datta, Keshava K; Khan, Aafaque A AA; Subbannayya, Tejaswini T; Wang, Jing J; Chaudhuri, Subhra S; Gupta, Sanjiv S; Shrivastav, Braj Raj BR; Jaiswal, Bijay S BS; Poojary, Satish S SS; Bhunia, Shushruta S; Garcia, Patricia P; Bizama, Carolina C; Rosa, Lorena L; Kwon, Wooil W; Kim, Hongbeom H; Han, Youngmin Y; Yadav, Thakur Deen TD; Ramprasad, Vedam L VL; Chaudhuri, Amitabha A; Modrusan, Zora Z; Roa, Juan Carlos JC; Tiwari, Pramod Kumar PK; Jang, Jin-Young JY; Seshagiri, Somasekar S

Publication Date: 2020-08-24

Variant appearance in text: GC: 604G>C; Glu202Gln

PubMed Link: 32839463

Variant Present in the following documents:

• 41467_2020_17880_MOESM6_ESM.xlsx, sheet 1

View BVdb publication page

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Interplay between MexAB-OprM and MexEF-OprN in clinical isolates of Pseudomonas aeruginosa.

Scientific Reports

Horna, Gertrudis G; López, María M; Guerra, Humberto H; Saénz, Yolanda Y; Ruiz, Joaquim J

Publication Date: 2018-11-07

Variant appearance in text: GC: E202Q

PubMed Link: 30405166

Variant Present in the following documents:

• 41598_2018_Article_34694.pdf

View BVdb publication page

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Crystal structure of E. coli lipoprotein diacylglyceryl transferase.

Nature Communications

Mao, Guotao G; Zhao, Yan Y; Kang, Xusheng X; Li, Zhijie Z; Zhang, Yan Y; Wang, Xianping X; Sun, Fei F; Sankaran, Krishnan K; Zhang, Xuejun C XC

Publication Date: 2016-01-05

Variant appearance in text: GC: E202Q

PubMed Link: 26729647

Variant Present in the following documents:

• Main text
• ncomms10198.pdf

View BVdb publication page

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Initial genome sequencing and analysis of multiple myeloma.

Nature

Chapman, Michael A MA; Lawrence, Michael S MS; Keats, Jonathan J JJ; Cibulskis, Kristian K; Sougnez, Carrie C; Schinzel, Anna C AC; Harview, Christina L CL; Brunet, Jean-Philippe JP; Ahmann, Gregory J GJ; Adli, Mazhar M; Anderson, Kenneth C KC; Ardlie, Kristin G KG; Auclair, Daniel D; Baker, Angela A; Bergsagel, P Leif PL; Bernstein, Bradley E BE; Drier, Yotam Y; Fonseca, Rafael R; Gabriel, Stacey B SB; Hofmeister, Craig C CC; Jagannath, Sundar S; Jakubowiak, Andrzej J AJ; Krishnan, Amrita A; Levy, Joan J; Liefeld, Ted T; Lonial, Sagar S; Mahan, Scott S; Mfuko, Bunmi B; Monti, Stefano S; Perkins, Louise M LM; Onofrio, Robb R; Pugh, Trevor J TJ; Rajkumar, S Vincent SV; Ramos, Alex H AH; Siegel, David S DS; Sivachenko, Andrey A; Stewart, A Keith AK; Trudel, Suzanne S; Vij, Ravi R; Voet, Douglas D; Winckler, Wendy W; Zimmerman, Todd T; Carpten, John J; Trent, Jeff J; Hahn, William C WC; Garraway, Levi A LA; Meyerson, Matthew M; Lander, Eric S ES; Getz, Gad G; Golub, Todd R TR

Publication Date: 2011-03-24

Variant appearance in text: GC: E202Q

PubMed Link: 21430775

Variant Present in the following documents:

• NIHMS385546-supplement-4.pdf

View BVdb publication page

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