Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.
Communications Biology
Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M
Genomic epidemiology of Salmonella Typhi in Central Division, Fiji, 2012 to 2016.
The Lancet Regional Health. Western Pacific
Davies, Mark R MR; Duchene, Sebastian S; Valcanis, Mary M; Jenkins, Aaron P AP; Jenney, Adam A; Rosa, Varanisese V; Hayes, Andrew J AJ; Strobel, Aneley Getahun AG; McIntyre, Liam L; Lacey, Jake A JA; Klemm, Elizabeth J EJ; Wong, Vanessa K VK; Sahukhan, Aalisha A; Thomson, Helen H; Page, Andrew A; Hocking, Dianna D; Wang, Nancy N; Tudravu, Litia L; Rafai, Eric E; Dougan, Gordon G; Howden, Benjamin P BP; Crump, John A JA; Mulholland, Kim K; Strugnell, Richard A RA
Genomics of an endemic cystic fibrosis Burkholderia multivorans strain reveals low within-patient evolution but high between-patient diversity.
Plos Pathogens
Lood, Cédric C; Peeters, Charlotte C; Lamy-Besnier, Quentin Q; Wagemans, Jeroen J; De Vos, Daniel D; Proesmans, Marijke M; Pirnay, Jean-Paul JP; Echahidi, Fedoua F; Piérard, Denis D; Thimmesch, Matthieu M; Boeras, Anca A; Lagrou, Katrien K; De Canck, Evelien E; De Wachter, Elke E; van Noort, Vera V; Lavigne, Rob R; Vandamme, Peter P
Design of a companion bioinformatic tool to detect the emergence and geographical distribution of SARS-CoV-2 Spike protein genetic variants.
Journal Of Translational Medicine
Massacci, Alice A; Sperandio, Eleonora E; D'Ambrosio, Lorenzo L; Maffei, Mariano M; Palombo, Fabio F; Aurisicchio, Luigi L; Ciliberto, Gennaro G; Pallocca, Matteo M
Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes.
The New Phytologist
Thilliez, Gaetan J A GJA; Armstrong, Miles R MR; Lim, Tze-Yin TY; Baker, Katie K; Jouet, Agathe A; Ward, Ben B; van Oosterhout, Cock C; Jones, Jonathan D G JDG; Huitema, Edgar E; Birch, Paul R J PRJ; Hein, Ingo I