Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: GC: 51A>T

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: GC: 51A>T

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 9
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 10
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 8

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Identification of Immune-Related Gene Signatures in Lung Adenocarcinoma and Lung Squamous Cell Carcinoma.

Frontiers In Immunology

Li, Na N; Wang, Jiahong J; Zhan, Xianquan X

Publication Date: 2021

Variant appearance in text: GC: 51A>T

PubMed Link: 34887858

Variant Present in the following documents:

• Table_3.xlsx, sheet 1

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Cross-sectional genomic perspective of epidemic waves of SARS-CoV-2: A pan India study.

Virus Research

Kumar, Sanjeet S; Bansal, Kanika K

Publication Date: 2022-01-15

Variant appearance in text: N/A

PubMed Link: 34822953

Variant Present in the following documents:

View BVdb publication page

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Cross-sectional genomic perspective of epidemic waves of SARS-CoV-2: A pan India study.

Virus Research

Kumar, Sanjeet S; Bansal, Kanika K

Publication Date: 2021-11-22

Variant appearance in text: N/A

PubMed Link: 34822953

Variant Present in the following documents:

View BVdb publication page

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The high diversity of SARS-CoV-2-related coronaviruses in pangolins alerts potential ecological risks.

Zoological Research

Peng, Min-Sheng MS; Li, Jian-Bo JB; Cai, Zheng-Fei ZF; Liu, Hang H; Tang, Xiaolu X; Ying, Ruochen R; Zhang, Jia-Nan JN; Tao, Jia-Jun JJ; Yin, Ting-Ting TT; Zhang, Tao T; Hu, Jing-Yang JY; Wu, Ru-Nian RN; Zhou, Zhong-Yin ZY; Zhang, Zhi-Gang ZG; Yu, Li L; Yao, Yong-Gang YG; Shi, Zheng-Li ZL; Lu, Xue-Mei XM; Lu, Jian J; Zhang, Ya-Ping YP

Publication Date: 2021-11-18

Variant appearance in text: GC: Leu17Phe

PubMed Link: 34766482

Variant Present in the following documents:

• zr-42-6-834-S1.pdf

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Genomic characterization between strains selected for death-feigning duration for avoiding attack of a beetle.

Scientific Reports

Tanaka, Keisuke K; Sasaki, Ken K; Matsumura, Kentarou K; Yajima, Shunsuke S; Miyatake, Takahisa T

Publication Date: 2021-11-08

Variant appearance in text: GC: 51A>T

PubMed Link: 34750398

Variant Present in the following documents:

• 41598_2021_987_MOESM1_ESM.xlsx, sheet 1

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K-Ras-Activated Cells Can Develop into Lung Tumors When Runx3-Mediated Tumor Suppressor Pathways Are Abrogated.

Molecules And Cells

Lee, You-Soub YS; Lee, Ja-Yeol JY; Song, Soo-Hyun SH; Kim, Da-Mi DM; Lee, Jung-Won JW; Chi, Xin-Zi XZ; Ito, Yoshiaki Y; Bae, Suk-Chul SC

Publication Date: 2020-10-31

Variant appearance in text: GC: Leu17Phe

PubMed Link: 33115981

Variant Present in the following documents:

• molce-43-889_Supple.xlsx, sheet 1

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The craniomandibular anatomy of the early archosauriform Euparkeria capensis and the dawn of the archosaur skull.

Royal Society Open Science

Sookias, Roland B RB; Dilkes, David D; Sobral, Gabriela G; Smith, Roger M H RMH; Wolvaardt, Frederik P FP; Arcucci, Andrea B AB; Bhullar, Bhart-Anjan S BS; Werneburg, Ingmar I

Publication Date: 2020-07

Variant appearance in text: GC: L17f

PubMed Link: 32874620

Variant Present in the following documents:

• rsos200116_review_history.pdf

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Comprehensive genomic and immunological characterization of Chinese non-small cell lung cancer patients.

Nature Communications

Zhang, Xu-Chao XC; Wang, Jun J; Shao, Guo-Guang GG; Wang, Qun Q; Qu, Xiaotao X; Wang, Bo B; Moy, Christopher C; Fan, Yue Y; Albertyn, Zayed Z; Huang, Xiayu X; Zhang, Jingyu J; Qiu, Yang Y; Platero, Suso S; Lorenzi, Matthew V MV; Zudaire, Enrique E; Yang, Jennifer J; Cheng, Ying Y; Xu, Lin L; Wu, Yi-Long YL

Publication Date: 2019-04-16

Variant appearance in text: GC: L17F

PubMed Link: 30992440

Variant Present in the following documents:

• 41467_2019_9762_MOESM13_ESM.xlsx, sheet 1

View BVdb publication page

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Human gastric cancer modelling using organoids.

Gut

Seidlitz, Therese T; Merker, Sebastian R SR; Rothe, Alexander A; Zakrzewski, Falk F; von Neubeck, Cläre C; Grützmann, Konrad K; Sommer, Ulrich U; Schweitzer, Christine C; Schölch, Sebastian S; Uhlemann, Heike H; Gaebler, Anne-Marlene AM; Werner, Kristin K; Krause, Mechthild M; Baretton, Gustavo B GB; Welsch, Thilo T; Koo, Bon-Kyoung BK; Aust, Daniela E DE; Klink, Barbara B; Weitz, Jürgen J; Stange, Daniel E DE

Publication Date: 2019-02

Variant appearance in text: GC: Leu17Phe

PubMed Link: 29703791

Variant Present in the following documents:

• gutjnl-2017-314549supp010.xlsx, sheet 3

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An ethnically relevant consensus Korean reference genome is a step towards personal reference genomes.

Nature Communications

Cho, Yun Sung YS; Kim, Hyunho H; Kim, Hak-Min HM; Jho, Sungwoong S; Jun, JeHoon J; Lee, Yong Joo YJ; Chae, Kyun Shik KS; Kim, Chang Geun CG; Kim, Sangsoo S; Eriksson, Anders A; Edwards, Jeremy S JS; Lee, Semin S; Kim, Byung Chul BC; Manica, Andrea A; Oh, Tae-Kwang TK; Church, George M GM; Bhak, Jong J

Publication Date: 2016-11-24

Variant appearance in text: GC: Leu17Phe

PubMed Link: 27882922

Variant Present in the following documents:

• ncomms13637-s1.pdf

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