Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: GC: 35C>A; A12D

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: GC: 35C>A; Ala12Glu

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 8
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 9

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Haplotype-resolved de novo assembly of the Vero cell line genome.

Npj Vaccines

Sène, Marie-Angélique MA; Kiesslich, Sascha S; Djambazian, Haig H; Ragoussis, Jiannis J; Xia, Yu Y; Kamen, Amine A AA

Publication Date: 2021-08-20

Variant appearance in text: GC: 35C>A

PubMed Link: 34417462

Variant Present in the following documents:

• 41541_2021_358_MOESM3_ESM.xlsx, sheet 1

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Phosphorus(III)-assisted regioselective C-H silylation of heteroarenes.

Nature Communications

Wang, Dingyi D; Chen, Xiangyang X; Wong, Jonathan J JJ; Jin, Liqun L; Li, Mingjie M; Zhao, Yue Y; Houk, K N KN; Shi, Zhuangzhi Z

Publication Date: 2021-01-22

Variant appearance in text: GC: A12E

PubMed Link: 33483484

Variant Present in the following documents:

• Main text

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Cancer neoantigen prioritization through sensitive and reliable proteogenomics analysis.

Nature Communications

Wen, Bo B; Li, Kai K; Zhang, Yun Y; Zhang, Bing B

Publication Date: 2020-04-09

Variant appearance in text: GC: A12E

PubMed Link: 32273506

Variant Present in the following documents:

• 41467_2020_15456_MOESM6_ESM.xlsx, sheet 1

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Reductive dechlorination of 1,2-dichloroethane in the presence of chloroethenes and 1,2-dichloropropane as co-contaminants.

Applied Microbiology And Biotechnology

Peng, Peng P; Schneidewind, Uwe U; Haest, Pieter Jan PJ; Bosma, Tom N P TNP; Danko, Anthony S AS; Smidt, Hauke H; Atashgahi, Siavash S

Publication Date: 2019-08

Variant appearance in text: GC: A12E

PubMed Link: 31250061

Variant Present in the following documents:

• Main text

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Synonymous mutations make dramatic contributions to fitness when growth is limited by a weak-link enzyme.

Plos Genetics

Kristofich, JohnCarlo J; Morgenthaler, Andrew B AB; Kinney, Wallis R WR; Ebmeier, Christopher C CC; Snyder, Daniel J DJ; Old, William M WM; Cooper, Vaughn S VS; Copley, Shelley D SD

Publication Date: 2018-08

Variant appearance in text: GC: A12E

PubMed Link: 30148850

Variant Present in the following documents:

• Main text
• pgen.1007615.pdf

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Comparative Genomics of Two Sequential Candida glabrata Clinical Isolates.

G3 (Bethesda, Md.)

Vale-Silva, Luis L; Beaudoing, Emmanuel E; Tran, Van Du T VDT; Sanglard, Dominique D

Publication Date: 2017-08-07

Variant appearance in text: GC: 35C>A

PubMed Link: 28663342

Variant Present in the following documents:

• 2413FileS2.xlsx, sheet 1

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Suberoylanilide hydroxamic acid radiosensitizes tumor hypoxic cells in vitro through the oxidation of nitroxyl to nitric oxide.

Free Radical Biology & Medicine

Samuni, Yuval Y; Wink, David A DA; Krishna, Murali C MC; Mitchell, James B JB; Goldstein, Sara S

Publication Date: 2014-08

Variant appearance in text: GC: A12E

PubMed Link: 24880052

Variant Present in the following documents:

• Main text

View BVdb publication page

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Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma.

Nature

Morin, Ryan D RD; Mendez-Lago, Maria M; Mungall, Andrew J AJ; Goya, Rodrigo R; Mungall, Karen L KL; Corbett, Richard D RD; Johnson, Nathalie A NA; Severson, Tesa M TM; Chiu, Readman R; Field, Matthew M; Jackman, Shaun S; Krzywinski, Martin M; Scott, David W DW; Trinh, Diane L DL; Tamura-Wells, Jessica J; Li, Sa S; Firme, Marlo R MR; Rogic, Sanja S; Griffith, Malachi M; Chan, Susanna S; Yakovenko, Oleksandr O; Meyer, Irmtraud M IM; Zhao, Eric Y EY; Smailus, Duane D; Moksa, Michelle M; Chittaranjan, Suganthi S; Rimsza, Lisa L; Brooks-Wilson, Angela A; Spinelli, John J JJ; Ben-Neriah, Susana S; Meissner, Barbara B; Woolcock, Bruce B; Boyle, Merrill M; McDonald, Helen H; Tam, Angela A; Zhao, Yongjun Y; Delaney, Allen A; Zeng, Thomas T; Tse, Kane K; Butterfield, Yaron Y; Birol, Inanç I; Holt, Rob R; Schein, Jacqueline J; Horsman, Douglas E DE; Moore, Richard R; Jones, Steven J M SJ; Connors, Joseph M JM; Hirst, Martin M; Gascoyne, Randy D RD; Marra, Marco A MA

Publication Date: 2011-07-27

Variant appearance in text: GC: A12E

PubMed Link: 21796119

Variant Present in the following documents:

View BVdb publication page

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