Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: GC: A12L

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

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Cancer neoantigen prioritization through sensitive and reliable proteogenomics analysis.

Nature Communications

Wen, Bo B; Li, Kai K; Zhang, Yun Y; Zhang, Bing B

Publication Date: 2020-04-09

Variant appearance in text: GC: A12L

PubMed Link: 32273506

Variant Present in the following documents:

• 41467_2020_15456_MOESM6_ESM.xlsx, sheet 1

View BVdb publication page

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The prognostic effects of somatic mutations in ER-positive breast cancer.

Nature Communications

Griffith, Obi L OL; Spies, Nicholas C NC; Anurag, Meenakshi M; Griffith, Malachi M; Luo, Jingqin J; Tu, Dongsheng D; Yeo, Belinda B; Kunisaki, Jason J; Miller, Christopher A CA; Krysiak, Kilannin K; Hundal, Jasreet J; Ainscough, Benjamin J BJ; Skidmore, Zachary L ZL; Campbell, Katie K; Kumar, Runjun R; Fronick, Catrina C; Cook, Lisa L; Snider, Jacqueline E JE; Davies, Sherri S; Kavuri, Shyam M SM; Chang, Eric C EC; Magrini, Vincent V; Larson, David E DE; Fulton, Robert S RS; Liu, Shuzhen S; Leung, Samuel S; Voduc, David D; Bose, Ron R; Dowsett, Mitch M; Wilson, Richard K RK; Nielsen, Torsten O TO; Mardis, Elaine R ER; Ellis, Matthew J MJ

Publication Date: 2018-09-04

Variant appearance in text: GC: A12L

PubMed Link: 30181556

Variant Present in the following documents:

• 41467_2018_5914_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

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Identifying DNase I hypersensitive sites as driver distal regulatory elements in breast cancer.

Nature Communications

D Antonio, Matteo M; Weghorn, Donate D; D Antonio-Chronowska, Agnieszka A; Coulet, Florence F; Olson, Katrina M KM; DeBoever, Christopher C; Drees, Frauke F; Arias, Angelo A; Alakus, Hakan H; Richardson, Andrea L AL; Schwab, Richard B RB; Farley, Emma K EK; Sunyaev, Shamil R SR; Frazer, Kelly A KA

Publication Date: 2017-09-05

Variant appearance in text: GC: A12L

PubMed Link: 28874753

Variant Present in the following documents:

• 41467_2017_Article_100.pdf

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Heterologous prime-boost vaccination with DNA and MVA vaccines, expressing HIV-1 subtype C mosaic Gag virus-like particles, is highly immunogenic in mice.

Plos One

Chapman, Ros R; Jongwe, Tsungai Ivai TI; Douglass, Nicola N; Chege, Gerald G; Williamson, Anna-Lise AL

Publication Date: 2017

Variant appearance in text: GC: A12L

PubMed Link: 28278263

Variant Present in the following documents:

• Main text
• pone.0173352.pdf

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HIV-1 Subtype C Mosaic Gag Expressed by BCG and MVA Elicits Persistent Effector T Cell Responses in a Prime-Boost Regimen in Mice.

Plos One

Jongwe, Tsungai Ivai TI; Chapman, Ros R; Douglass, Nicola N; Chetty, Shivan S; Chege, Gerald G; Williamson, Anna-Lise AL

Publication Date: 2016

Variant appearance in text: GC: A12L

PubMed Link: 27427967

Variant Present in the following documents:

• Main text
• pone.0159141.pdf

View BVdb publication page

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