Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: GC: 29C>A

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: GC: 29C>A

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 10

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Effect of Mutations in GvpJ and GvpM on Gas Vesicle Formation of Halobacterium salinarum.

Frontiers In Microbiology

Jost, Alisa A; Knitsch, Regine R; Völkner, Kerstin K; Pfeifer, Felicitas F

Publication Date: 2021

Variant appearance in text: GC: A10D

PubMed Link: 34975818

Variant Present in the following documents:

• Data_Sheet_1.pdf

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High-efficiency delivery of CRISPR-Cas9 by engineered probiotics enables precise microbiome editing.

Molecular Systems Biology

Neil, Kevin K; Allard, Nancy N; Roy, Patricia P; Grenier, Frédéric F; Menendez, Alfredo A; Burrus, Vincent V; Rodrigue, Sébastien S

Publication Date: 2021-10

Variant appearance in text: GC: 29C>A

PubMed Link: 34665940

Variant Present in the following documents:

• MSB-17-e10335-s001.xlsx, sheet 2

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DJ-1 attenuates the glycation of mitochondrial complex I and complex III in the post-ischemic heart.

Scientific Reports

Pantner, Yvanna Y; Polavarapu, Rohini R; Chin, Lih-Shen LS; Li, Lian L; Shimizu, Yuuki Y; Calvert, John W JW

Publication Date: 2021-09-30

Variant appearance in text: GC: A10D

PubMed Link: 34593886

Variant Present in the following documents:

• Main text

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Longitudinal analyses of CLL in mice identify leukemia-related clonal changes including a Myc gain predicting poor outcome in patients.

Leukemia

Öztürk, Selcen S; Paul, Yashna Y; Afzal, Saira S; Gil-Farina, Irene I; Jauch, Anna A; Bruch, Peter-Martin PM; Kalter, Verena V; Hanna, Bola B; Arseni, Lavinia L; Roessner, Philipp M PM; Schmidt, Manfred M; Stilgenbauer, Stephan S; Dietrich, Sascha S; Lichter, Peter P; Zapatka, Marc M; Seiffert, Martina M

Publication Date: 2022-02

Variant appearance in text: GC: A10D

PubMed Link: 34417556

Variant Present in the following documents:

• 41375_2021_1381_MOESM9_ESM.xlsx, sheet 1

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Hybrid external-cavity lasers (ECL) using photonic wire bonds as coupling elements.

Scientific Reports

Xu, Yilin Y; Maier, Pascal P; Blaicher, Matthias M; Dietrich, Philipp-Immanuel PI; Marin-Palomo, Pablo P; Hartmann, Wladislaw W; Bao, Yiyang Y; Peng, Huanfa H; Billah, Muhammad Rodlin MR; Singer, Stefan S; Troppenz, Ute U; Moehrle, Martin M; Randel, Sebastian S; Freude, Wolfgang W; Koos, Christian C

Publication Date: 2021-08-12

Variant appearance in text: GC: A10D

PubMed Link: 34385575

Variant Present in the following documents:

• Main text

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In vivo evolution of an emerging zoonotic bacterial pathogen in an immunocompromised human host.

Nature Communications

Launay, A A; Wu, C-J CJ; Dulanto Chiang, A A; Youn, J-H JH; Khil, P P PP; Dekker, J P JP

Publication Date: 2021-07-23

Variant appearance in text: GC: A10D

PubMed Link: 34301946

Variant Present in the following documents:

• 41467_2021_24668_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

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K-Ras-Activated Cells Can Develop into Lung Tumors When Runx3-Mediated Tumor Suppressor Pathways Are Abrogated.

Molecules And Cells

Lee, You-Soub YS; Lee, Ja-Yeol JY; Song, Soo-Hyun SH; Kim, Da-Mi DM; Lee, Jung-Won JW; Chi, Xin-Zi XZ; Ito, Yoshiaki Y; Bae, Suk-Chul SC

Publication Date: 2020-10-31

Variant appearance in text: GC: 29C>A

PubMed Link: 33115981

Variant Present in the following documents:

• molce-43-889_Supple.xlsx, sheet 1

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Design, Synthesis, and Biological Investigation of Novel Classes of 3-Carene-Derived Potent Inhibitors of TDP1.

Molecules (Basel, Switzerland)

Il'ina, Irina V IV; Dyrkheeva, Nadezhda S NS; Zakharenko, Alexandra L AL; Sidorenko, Alexander Yu AY; Li-Zhulanov, Nikolay S NS; Korchagina, Dina V DV; Chand, Raina R; Ayine-Tora, Daniel M DM; Chepanova, Arina A AA; Zakharova, Olga D OD; Ilina, Ekaterina S ES; Reynisson, Jóhannes J; Malakhova, Anastasia A AA; Medvedev, Sergey P SP; Zakian, Suren M SM; Volcho, Konstantin P KP; Salakhutdinov, Nariman F NF; Lavrik, Olga I OI

Publication Date: 2020-07-31

Variant appearance in text: GC: a10d

PubMed Link: 32751997

Variant Present in the following documents:

• molecules-25-03496.pdf

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Frequency of MicroRNA Response Elements Identifies Pathologically Relevant Signaling Pathways in Triple-Negative Breast Cancer.

Iscience

Nair, Asha A AA; Tang, Xiaojia X; Thompson, Kevin J KJ; Vedell, Peter T PT; Kalari, Krishna R KR; Subramanian, Subbaya S

Publication Date: 2020-06-26

Variant appearance in text: GC: A10D

PubMed Link: 32629614

Variant Present in the following documents:

• Main text

View BVdb publication page

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Comparative analysis of primary versus relapse/refractory DLBCL identifies shifts in mutation spectrum.

Oncotarget

Greenawalt, Danielle M DM; Liang, Winnie S WS; Saif, Sakina S; Johnson, Justin J; Todorov, Petar P; Dulak, Austin A; Enriquez, Daniel D; Halperin, Rebecca R; Ahmed, Ambar A; Saveliev, Vladislav V; Carpten, John J; Craig, David D; Barrett, J Carl JC; Dougherty, Brian B; Zinda, Michael M; Fawell, Stephen S; Dry, Jonathan R JR; Byth, Kate K

Publication Date: 2017-11-21

Variant appearance in text: GC: 29C>A

PubMed Link: 29245897

Variant Present in the following documents:

• oncotarget-08-99237-s003.xlsx, sheet 1

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Landscape of genomic diversity and host adaptation in Fusarium graminearum.

Bmc Genomics

Laurent, Benoit B; Moinard, Magalie M; Spataro, Cathy C; Ponts, Nadia N; Barreau, Christian C; Foulongne-Oriol, Marie M

Publication Date: 2017-02-23

Variant appearance in text: GC: 29C>A

PubMed Link: 28231761

Variant Present in the following documents:

• 12864_2017_3524_MOESM3_ESM.xlsx, sheet 2

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Variant discovery in the sheep milk transcriptome using RNA sequencing.

Bmc Genomics

Suárez-Vega, Aroa A; Gutiérrez-Gil, Beatriz B; Klopp, Christophe C; Tosser-Klopp, Gwenola G; Arranz, Juan José JJ

Publication Date: 2017-02-15

Variant appearance in text: GC: 29C>A; Ala10Asp

PubMed Link: 28202015

Variant Present in the following documents:

• 12864_2017_3581_MOESM1_ESM.xlsx, sheet 1

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Organization of cholinergic, catecholaminergic, serotonergic and orexinergic nuclei in three strepsirrhine primates: Galago demidoff, Perodicticus potto and Lemur catta.

Journal Of Chemical Neuroanatomy

Calvey, Tanya T; Patzke, Nina N; Kaswera-Kyamakya, Consolate C; Gilissen, Emmanuel E; Bertelsen, Mads F MF; Pettigrew, John D JD; Manger, Paul R PR

Publication Date: 2015-12

Variant appearance in text: GC: A10d

PubMed Link: 26562782

Variant Present in the following documents:

• main.pdf

View BVdb publication page

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