Publications:

---

A generalizable machine learning framework for classifying DNA repair defects using ctDNA exomes.

Npj Precision Oncology

Ritch, Elie J EJ; Herberts, Cameron C; Warner, Evan W EW; Ng, Sarah W S SWS; Kwan, Edmond M EM; Bacon, Jack V W JVW; Bernales, Cecily Q CQ; Schönlau, Elena E; Fonseca, Nicolette M NM; Giri, Veda N VN; Maurice-Dror, Corinne C; Vandekerkhove, Gillian G; Jones, Steven J M SJM; Chi, Kim N KN; Wyatt, Alexander W AW

Publication Date: 2023-03-13

Variant appearance in text: APC: T39A

PubMed Link: 36914848

Variant Present in the following documents:

• 41698_2023_366_MOESM2_ESM.xlsx, sheet 4

View BVdb publication page

---

Cdc6 is sequentially regulated by PP2A-Cdc55, Cdc14, and Sic1 for origin licensing in S. cerevisiae.

Elife

Philip, Jasmin J; Örd, Mihkel M; Silva, Andriele A; Singh, Shaneen S; Diffley, John Fx JF; Remus, Dirk D; Loog, Mart M; Ikui, Amy E AE

Publication Date: 2022-02-10

Variant appearance in text: APC: T39A

PubMed Link: 35142288

Variant Present in the following documents:

• Main text
• elife-74437.pdf

View BVdb publication page

---

Cdc6 is sequentially regulated by PP2A-Cdc55, Cdc14, and Sic1 for origin licensing in S. cerevisiae.

Elife

Philip, Jasmin J; Örd, Mihkel M; Silva, Andriele A; Singh, Shaneen S; Diffley, John Fx JF; Remus, Dirk D; Loog, Mart M; Ikui, Amy E AE

Publication Date: 2022-02-10

Variant appearance in text: APC: T39A

PubMed Link: 35142288

Variant Present in the following documents:

• Main text
• elife-74437.pdf

View BVdb publication page

---

Cyclin-Specific Docking Mechanisms Reveal the Complexity of M-CDK Function in the Cell Cycle.

Molecular Cell

Örd, Mihkel M; Venta, Rainis R; Möll, Kaidi K; Valk, Ervin E; Loog, Mart M

Publication Date: 2019-07-11

Variant appearance in text: APC: T39A

PubMed Link: 31101497

Variant Present in the following documents:

• Main text
• mmc2.pdf

View BVdb publication page

---

The impact of tumor profiling approaches and genomic data strategies for cancer precision medicine.

Genome Medicine

Garofalo, Andrea A; Sholl, Lynette L; Reardon, Brendan B; Taylor-Weiner, Amaro A; Amin-Mansour, Ali A; Miao, Diana D; Liu, David D; Oliver, Nelly N; MacConaill, Laura L; Ducar, Matthew M; Rojas-Rudilla, Vanesa V; Giannakis, Marios M; Ghazani, Arezou A; Gray, Stacy S; Janne, Pasi P; Garber, Judy J; Joffe, Steve S; Lindeman, Neal N; Wagle, Nikhil N; Garraway, Levi A LA; Van Allen, Eliezer M EM

Publication Date: 2016-07-26

Variant appearance in text: APC: 115A>G; T39A

PubMed Link: 27460824

Variant Present in the following documents:

• 13073_2016_333_MOESM5_ESM.xlsx, sheet 1

View BVdb publication page

---

Plasma membrane/cell wall perturbation activates a novel cell cycle checkpoint during G1 in Saccharomyces cerevisiae.

Proceedings Of The National Academy Of Sciences Of The United States Of America

Kono, Keiko K; Al-Zain, Amr A; Schroeder, Lea L; Nakanishi, Makoto M; Ikui, Amy E AE

Publication Date: 2016-06-21

Variant appearance in text: APC: T39A

PubMed Link: 27274080

Variant Present in the following documents:

• Main text

View BVdb publication page

---

Cyclin and cyclin-dependent kinase substrate requirements for preventing rereplication reveal the need for concomitant activation and inhibition.

Genetics

Ikui, Amy E AE; Archambault, Vincent V; Drapkin, Benjamin J BJ; Campbell, Veronica V; Cross, Frederick R FR

Publication Date: 2007-03

Variant appearance in text: APC: T39A

PubMed Link: 17194775

Variant Present in the following documents:

• Main text

View BVdb publication page

---

Distinct mechanisms control the stability of the related S-phase cyclins Clb5 and Clb6.

Molecular And Cellular Biology

Jackson, Leisa P LP; Reed, Steven I SI; Haase, Steven B SB

Publication Date: 2006-03

Variant appearance in text: APC: T39A

PubMed Link: 16508019

Variant Present in the following documents:

• Main text

View BVdb publication page

---