Publications:

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Structural and energetic analyses of SARS-CoV-2 N-terminal domain characterise sugar binding pockets and suggest putative impacts of variants on COVID-19 transmission.

Computational And Structural Biotechnology Journal

Lam, Su Datt SD; Waman, Vaishali P VP; Fraternali, Franca F; Orengo, Christine C; Lees, Jonathan J

Publication Date: 2022

Variant appearance in text: APC: E154K

PubMed Link: 36408455

Variant Present in the following documents:

• main.pdf

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CD8⁺ T-cell immune escape by SARS-CoV-2 variants of concern.

Frontiers In Immunology

Kombe Kombe, Arnaud John AJ; Biteghe, Fleury Augustin Nsole FAN; Ndoutoume, Zélia Nelly ZN; Jin, Tengchuan T

Publication Date: 2022

Variant appearance in text: APC: E154K

PubMed Link: 36389664

Variant Present in the following documents:

• Main text
• fimmu-13-962079.pdf

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Variant-specific vaccination induces systems immune responses and potent in vivo protection against SARS-CoV-2.

Cell Reports. Medicine

Peng, Lei L; Renauer, Paul A PA; Ökten, Arya A; Fang, Zhenhao Z; Park, Jonathan J JJ; Zhou, Xiaoyu X; Lin, Qianqian Q; Dong, Matthew B MB; Filler, Renata R; Xiong, Qiancheng Q; Clark, Paul P; Lin, Chenxiang C; Wilen, Craig B CB; Chen, Sidi S

Publication Date: 2022-05-17

Variant appearance in text: APC: E154K

PubMed Link: 35561673

Variant Present in the following documents:

• Main text
• mmc4.pdf
• main.pdf

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Detection of germline variants in Brazilian breast cancer patients using multigene panel testing.

Scientific Reports

Guindalini, Rodrigo Santa Cruz RSC; Viana, Danilo Vilela DV; Kitajima, João Paulo Fumio Whitaker JPFW; Rocha, Vinícius Marques VM; López, Rossana Verónica Mendoza RVM; Zheng, Yonglan Y; Freitas, Érika É; Monteiro, Fabiola Paoli Mendes FPM; Valim, André A; Schlesinger, David D; Kok, Fernando F; Olopade, Olufunmilayo I OI; Folgueira, Maria Aparecida Azevedo Koike MAAK

Publication Date: 2022-03-09

Variant appearance in text: APC: 460G>A

PubMed Link: 35264596

Variant Present in the following documents:

• 41598_2022_7383_MOESM3_ESM.xlsx, sheet 1

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A Narrative Review of COVID-19 Vaccines.

Vaccines

Eroglu, Barbaros B; Nuwarda, Rina Fajri RF; Ramzan, Iqbal I; Kayser, Veysel V

Publication Date: 2021-12-31

Variant appearance in text: APC: E154K

PubMed Link: 35062723

Variant Present in the following documents:

• Main text
• vaccines-10-00062.pdf

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A Narrative Review of COVID-19 Vaccines.

Vaccines

Eroglu, Barbaros B; Nuwarda, Rina Fajri RF; Ramzan, Iqbal I; Kayser, Veysel V

Publication Date: 2021-12-31

Variant appearance in text: APC: E154K

PubMed Link: 35062723

Variant Present in the following documents:

• Main text
• vaccines-10-00062.pdf

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Diverse vaccine platforms safeguarding against SARS-CoV-2 and its variants.

Expert Review Of Vaccines

Chatterjee, Bhaswati B; Thakur, Suman S SS

Publication Date: 2021-10-26

Variant appearance in text: APC: E154K

PubMed Link: 34697980

Variant Present in the following documents:

• Main text

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Vaccinia virus-based vaccines confer protective immunity against SARS-CoV-2 virus in Syrian hamsters.

Plos One

Kulkarni, Rakesh R; Chen, Wen-Ching WC; Lee, Ying Y; Kao, Chi-Fei CF; Hu, Shiu-Lok SL; Ma, Hsiu-Hua HH; Jan, Jia-Tsrong JT; Liao, Chun-Che CC; Liang, Jian-Jong JJ; Ko, Hui-Ying HY; Sun, Cheng-Pu CP; Lin, Yin-Shoiou YS; Wang, Yu-Chiuan YC; Wei, Sung-Chan SC; Lin, Yi-Ling YL; Ma, Che C; Chao, Yu-Chan YC; Chou, Yu-Chi YC; Chang, Wen W

Publication Date: 2021

Variant appearance in text: APC: E154K

PubMed Link: 34499677

Variant Present in the following documents:

• Main text

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An intranasal vaccine durably protects against SARS-CoV-2 variants in mice.

Cell Reports

Hassan, Ahmed O AO; Shrihari, Swathi S; Gorman, Matthew J MJ; Ying, Baoling B; Yaun, Dansu D; Raju, Saravanan S; Chen, Rita E RE; Dmitriev, Igor P IP; Kashentseva, Elena E; Adams, Lucas J LJ; Mann, Colin C; Davis-Gardner, Meredith E ME; Suthar, Mehul S MS; Shi, Pei-Yong PY; Saphire, Erica Ollmann EO; Fremont, Daved H DH; Curiel, David T DT; Alter, Galit G; Diamond, Michael S MS

Publication Date: 2021-07-27

Variant appearance in text: APC: E154K

PubMed Link: 34289385

Variant Present in the following documents:

• Main text

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An intranasal vaccine durably protects against SARS-CoV-2 variants in mice.

Cell Reports

Hassan, Ahmed O AO; Shrihari, Swathi S; Gorman, Matthew J MJ; Ying, Baoling B; Yuan, Dansu D; Raju, Saravanan S; Chen, Rita E RE; Dmitriev, Igor P IP; Kashentseva, Elena E; Adams, Lucas J LJ; Mann, Colin C; Davis-Gardner, Meredith E ME; Suthar, Mehul S MS; Shi, Pei-Yong PY; Saphire, Erica Ollmann EO; Fremont, Daved H DH; Curiel, David T DT; Alter, Galit G; Diamond, Michael S MS

Publication Date: 2021-07-27

Variant appearance in text: APC: E154K

PubMed Link: 34289385

Variant Present in the following documents:

• Main text

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Evolution of late-stage metastatic melanoma is dominated by aneuploidy and whole genome doubling.

Nature Communications

Vergara, Ismael A IA; Mintoff, Christopher P CP; Sandhu, Shahneen S; McIntosh, Lachlan L; Young, Richard J RJ; Wong, Stephen Q SQ; Colebatch, Andrew A; Cameron, Daniel L DL; Kwon, Julia Lai JL; Wolfe, Rory R; Peng, Angela A; Ellul, Jason J; Dou, Xuelin X; Fedele, Clare C; Boyle, Samantha S; Arnau, Gisela Mir GM; Raleigh, Jeanette J; Hatzimihalis, Athena A; Szeto, Pacman P; Mooi, Jennifer J; Widmer, Daniel S DS; Cheng, Phil F PF; Amann, Valerie V; Dummer, Reinhard R; Hayward, Nicholas N; Wilmott, James J; Scolyer, Richard A RA; Cho, Raymond J RJ; Bowtell, David D; Thorne, Heather H; Alsop, Kathryn K; Cordner, Stephen S; Woodford, Noel N; Leditschke, Jodie J; O'Brien, Patricia P; Dawson, Sarah-Jane SJ; McArthur, Grant A GA; Mann, Graham J GJ; Levesque, Mitchell P MP; Papenfuss, Anthony T AT; Shackleton, Mark M

Publication Date: 2021-03-04

Variant appearance in text: APC: Glu154Lys

PubMed Link: 33664264

Variant Present in the following documents:

• 41467_2021_21576_MOESM1_ESM.pdf

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IFN-gamma-induced PD-L1 expression in melanoma depends on p53 expression.

Journal Of Experimental & Clinical Cancer Research : Cr

Thiem, Alexander A; Hesbacher, Sonja S; Kneitz, Hermann H; di Primio, Teresa T; Heppt, Markus V MV; Hermanns, Heike M HM; Goebeler, Matthias M; Meierjohann, Svenja S; Houben, Roland R; Schrama, David D

Publication Date: 2019-09-11

Variant appearance in text: APC: E154K

PubMed Link: 31506076

Variant Present in the following documents:

• Main text
• 13046_2019_Article_1403.pdf

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Nonstimulatory peptide-MHC enhances human T-cell antigen-specific responses by amplifying proximal TCR signaling.

Nature Communications

Zhao, Xiang X; Sankaran, Shvetha S; Yap, Jiawei J; Too, Chien Tei CT; Ho, Zi Zong ZZ; Dolton, Garry G; Legut, Mateusz M; Ren, Ee Chee EC; Sewell, Andrew K AK; Bertoletti, Antonio A; MacAry, Paul A PA; Brzostek, Joanna J; Gascoigne, Nicholas R J NRJ

Publication Date: 2018-07-13

Variant appearance in text: APC: E154K

PubMed Link: 30006605

Variant Present in the following documents:

• Main text
• 41467_2018_Article_5288.pdf

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