Publications:

---

Integrative proteomic characterization of adenocarcinoma of esophagogastric junction.

Nature Communications

Li, Shengli S; Yuan, Li L; Xu, Zhi-Yuan ZY; Xu, Jing-Li JL; Chen, Gui-Ping GP; Guan, Xiaoqing X; Pan, Guang-Zhao GZ; Hu, Can C; Dong, Jinyun J; Du, Yi-An YA; Yang, Li-Tao LT; Ni, Mao-Wei MW; Jiang, Rui-Bin RB; Zhu, Xiu X; Lv, Hang H; Xu, Han-Dong HD; Zhang, Sheng-Jie SJ; Qin, Jiang-Jiang JJ; Cheng, Xiang-Dong XD

Publication Date: 2023-02-11

Variant appearance in text: 225: 28C>G

PubMed Link: 36774361

Variant Present in the following documents:

• 41467_2023_36462_MOESM5_ESM.xlsx, sheet 1

View BVdb publication page

---

Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery.

Nature Communications

Havugimana, Pierre C PC; Goel, Raghuveera Kumar RK; Phanse, Sadhna S; Youssef, Ahmed A; Padhorny, Dzmitry D; Kotelnikov, Sergei S; Kozakov, Dima D; Emili, Andrew A

Publication Date: 2022-07-13

Variant appearance in text: 225: 28C>G

PubMed Link: 35831314

Variant Present in the following documents:

• 41467_2022_31809_MOESM8_ESM.xlsx, sheet 3

View BVdb publication page

---

SARS-CoV-2 variants and spike mutations involved in second wave of COVID-19 pandemic in India.

Transboundary And Emerging Diseases

Muttineni, Radhakrishna R; R N, Binitha B; Putty, Kalyani K; Marapakala, Kavitha K; K P, Sandra S; Panyam, Jaslin J; Vemula, Aravind A; Singh, Shashi Mohan SM; Balachandran, Subin S; S T, Viroji Rao VR; Kondapi, Anand Kumar AK

Publication Date: 2022-09

Variant appearance in text: 225: L10V

PubMed Link: 35266305

Variant Present in the following documents:

• TBED-9999-0-s004.xlsx, sheet 1

View BVdb publication page

---

Mutational landscape of high-grade B-cell lymphoma with MYC-, BCL2 and/or BCL6 rearrangements characterized by whole-exome sequencing.

Haematologica

Künstner, Axel A; Witte, Hanno M HM; Riedl, Jörg J; Bernard, Veronica V; Stölting, Stephanie S; Merz, Hartmut H; Olschewski, Vito V; Peter, Wolfgang W; Ketzer, Julius J; Busch, Yannik Y; Trojok, Peter P; Bubnoff, Nikolas von NV; Busch, Hauke H; Feller, Alfred C AC; Gebauer, Niklas N

Publication Date: 2022-08-01

Variant appearance in text: EGR1: L10V

PubMed Link: 34788985

Variant Present in the following documents:

• 2021_279631_KUNSTNER_TABS5_SUPPL.xlsx, sheet 1

View BVdb publication page

---

A Multipronged Approach Establishes Covalent Modification of β-Tubulin as the Mode of Action of Benzamide Anti-cancer Toxins.

Journal Of Medicinal Chemistry

Povedano, Juan Manuel JM; Rallabandi, Rameshu R; Bai, Xin X; Ye, Xuecheng X; Liou, Joel J; Chen, Hong H; Kim, Jiwoong J; Xie, Yang Y; Posner, Bruce B; Rice, Luke L; De Brabander, Jef K JK; McFadden, David G DG

Publication Date: 2020-11-25

Variant appearance in text: 225: Leu10Val

PubMed Link: 33180487

Variant Present in the following documents:

• jm0c01482_si_002.xlsx, sheet 1

View BVdb publication page

---

Identification of Single Nucleotide Polymorphism in Red Clover (Trifolium pratense L.) Using Targeted Genomic Amplicon Sequencing and RNA-seq.

Frontiers In Plant Science

Li, Wenli W; Riday, Heathcliffe H; Riehle, Christina C; Edwards, Andrea A; Dinkins, Randy R

Publication Date: 2019

Variant appearance in text: 225: Leu10Val

PubMed Link: 31708937

Variant Present in the following documents:

• DataSheet_2.xlsx, sheet 1

View BVdb publication page

---

A MiSeq-HyDRA platform for enhanced HIV drug resistance genotyping and surveillance.

Scientific Reports

Taylor, Tracy T; Lee, Emma R ER; Nykoluk, Mikaela M; Enns, Eric E; Liang, Binhua B; Capina, Rupert R; Gauthier, Marie-Krystel MK; Domselaar, Gary Van GV; Sandstrom, Paul P; Brooks, James J; Ji, Hezhao H

Publication Date: 2019-06-20

Variant appearance in text: 225: L10V

PubMed Link: 31222149

Variant Present in the following documents:

• 41598_2019_Article_45328.pdf

View BVdb publication page

---

Transcriptomic signature reveals mechanism of flower bud distortion in witches'-broom disease of soybean (Glycine max).

Bmc Plant Biology

Jaiswal, Sarika S; Jadhav, Pravin V PV; Jasrotia, Rahul Singh RS; Kale, Prashant B PB; Kad, Snehal K SK; Moharil, Mangesh P MP; Dudhare, Mahendra S MS; Kheni, Jashminkumar J; Deshmukh, Amit G AG; Mane, Shyamsundar S SS; Nandanwar, Ravindra S RS; Penna, Suprasanna S; Manjaya, Joy G JG; Iquebal, Mir Asif MA; Tomar, Rukam Singh RS; Kawar, Prashant G PG; Rai, Anil A; Kumar, Dinesh D

Publication Date: 2019-01-15

Variant appearance in text: 225: 28C>G

PubMed Link: 30646861

Variant Present in the following documents:

• 12870_2018_1601_MOESM7_ESM.xlsx, sheet 1

View BVdb publication page

---

Integrated genomic and metabolomic profiling of ISC1, an emerging Leishmania donovani population in the Indian subcontinent.

Infection, Genetics And Evolution : Journal Of Molecular Epidemiology And Evolutionary Genetics In Infectious Diseases

Cuypers, Bart B; Berg, Maya M; Imamura, Hideo H; Dumetz, Franck F; De Muylder, Géraldine G; Domagalska, Malgorzata A MA; Rijal, Suman S; Bhattarai, Narayan Raj NR; Maes, Ilse I; Sanders, Mandy M; Cotton, James A JA; Meysman, Pieter P; Laukens, Kris K; Dujardin, Jean-Claude JC

Publication Date: 2018-08

Variant appearance in text: 225: 28C>G

PubMed Link: 29679745

Variant Present in the following documents:

• mmc3.xlsx, sheet 1

View BVdb publication page

---

Modeling cancer driver events in vitro using barrier bypass-clonal expansion assays and massively parallel sequencing.

Oncogene

Huskova, H H; Ardin, M M; Weninger, A A; Vargova, K K; Barrin, S S; Villar, S S; Olivier, M M; Stopka, T T; Herceg, Z Z; Hollstein, M M; Zavadil, J J; Korenjak, M M

Publication Date: 2017-10-26

Variant appearance in text: 225: L10V

PubMed Link: 28692054

Variant Present in the following documents:

• onc2017215x4.xls, sheet 1

View BVdb publication page

---

Variant discovery in the sheep milk transcriptome using RNA sequencing.

Bmc Genomics

Suárez-Vega, Aroa A; Gutiérrez-Gil, Beatriz B; Klopp, Christophe C; Tosser-Klopp, Gwenola G; Arranz, Juan José JJ

Publication Date: 2017-02-15

Variant appearance in text: 225: 28C>G

PubMed Link: 28202015

Variant Present in the following documents:

• 12864_2017_3581_MOESM1_ESM.xlsx, sheet 1

View BVdb publication page

---

Effectiveness of Ritonavir-Boosted Protease Inhibitor Monotherapy in Clinical Practice Even with Previous Virological Failures to Protease Inhibitor-Based Regimens.

Plos One

López-Cortés, Luis F LF; Castaño, Manuel A MA; López-Ruz, Miguel A MA; Rios-Villegas, María J MJ; Hernández-Quero, José J; Merino, Dolores D; Jiménez-Aguilar, Patricia P; Marquez-Solero, Manuel M; Terrón-Pernía, Alberto A; Tellez-Pérez, Francisco F; Viciana, Pompeyo P; Orihuela-Cañadas, Francisco F; Palacios-Baena, Zaira Z; Vinuesa-Garcia, David D; Fajardo-Pico, Jose M JM; Romero-Palacios, Alberto A; Ojeda-Burgos, Guillermo G; Pasquau-Liaño, Juan J

Publication Date: 2016

Variant appearance in text: 225: L10V

PubMed Link: 26872331

Variant Present in the following documents:

• pone.0148924.pdf

View BVdb publication page

---

Mutations in the reverse transcriptase and protease genes of human immunodeficiency virus-1 from antiretroviral naïve and treated pediatric patients.

Viruses

Bure, Dinesh D; Makhdoomi, Muzamil A MA; Lodha, Rakesh R; Prakash, Somi Sankaran SS; Kumar, Rajesh R; Parray, Hilal A HA; Singh, Ravinder R; Kabra, Sushil K SK; Luthra, Kalpana K

Publication Date: 2015-02-10

Variant appearance in text: 225: L10V

PubMed Link: 25674767

Variant Present in the following documents:

• Main text
• viruses-07-00590.pdf

View BVdb publication page

---

Deep sequencing of HIV-1 near full-length proviral genomes identifies high rates of BF1 recombinants including two novel circulating recombinant forms (CRF) 70_BF1 and a disseminating 71_BF1 among blood donors in Pernambuco, Brazil.

Plos One

Pessôa, Rodrigo R; Watanabe, Jaqueline Tomoko JT; Calabria, Paula P; Felix, Alvina Clara AC; Loureiro, Paula P; Sabino, Ester C EC; Busch, Michael P MP; Sanabani, Sabri S SS; ,

Publication Date: 2014

Variant appearance in text: 225: L10V

PubMed Link: 25401747

Variant Present in the following documents:

• Main text
• pone.0112674.pdf

View BVdb publication page

---

Annotated type catalogue of the Bulimulidae (Mollusca, Gastropoda, Orthalicoidea) in the Natural History Museum, London.

Zookeys

Breure, Abraham S H AS; Ablett, Jonathan D JD

Publication Date: 2014

Variant appearance in text: 225: L10v

PubMed Link: 24715782

Variant Present in the following documents:

• Main text
• zookeys-392-001.pdf

View BVdb publication page

---

HIV-1 drug resistance mutations: an updated framework for the second decade of HAART.

Aids Reviews

Shafer, Robert W RW; Schapiro, Jonathan M JM

Publication Date: 2008

Variant appearance in text: 225: L10V

PubMed Link: 18615118

Variant Present in the following documents:

• Main text

View BVdb publication page

---