EGR1 c.133_135delinsTGG ;(p.A45W)

Variant ID: 5-137801583-GCT-TGG

NM_001964.2(EGR1):c.133_135delinsTGG;(p.A45W)

This variant was identified in 21 publications

View GRCh38 version.




Publications:


Deep learning model accurately classifies metastatic tumors from primary tumors based on mutational signatures.

Scientific Reports
Zheng, Weisheng W; Pu, Mengchen M; Li, Xiaorong X; Du, Zhaolan Z; Jin, Sutong S; Li, Xingshuai X; Zhou, Jielong J; Zhang, Yingsheng Y
Publication Date: 2023-05-30

Variant appearance in text: 225: A45W
PubMed Link: 37253775
Variant Present in the following documents:
  • 41598_2023_35842_MOESM8_ESM.xlsx, sheet 3
  • 41598_2023_35842_MOESM8_ESM.xlsx, sheet 1
View BVdb publication page



Follicle-like tertiary lymphoid structures: A potential biomarker for prognosis and immunotherapy response in patients with laryngeal squamous cell carcinoma.

Frontiers In Immunology
Liang, Haifeng H; Zhang, Zhigang Z; Guan, Zhong Z; Zheng, Shibie S; Lou, Jintao J; Liu, Wei W; Cai, Qian Q; Si, Yu Y
Publication Date: 2023

Variant appearance in text: 225: A45W
PubMed Link: 36776859
Variant Present in the following documents:
  • Table_6.xlsx, sheet 1
View BVdb publication page



Immune Infiltration-Related ceRNA Network Revealing Potential Biomarkers for Prognosis of Head and Neck Squamous Cell Carcinoma.

Disease Markers
Zhao, Shuai S; Peng, Mengle M; Wang, Zhongquan Z; Cao, Jingjing J; Zhang, Xinyu X; Yu, Ruijing R; Huang, Tao T; Lian, Wenping W
Publication Date: 2022

Variant appearance in text: 225: A45W
PubMed Link: 36097539
Variant Present in the following documents:
  • 1014347.f2.pdf
View BVdb publication page



Comprehensive analyses of PDHA1 that serves as a predictive biomarker for immunotherapy response in cancer.

Frontiers In Pharmacology
Deng, Langmei L; Jiang, Anqi A; Zeng, Hanqing H; Peng, Xiaoji X; Song, Liying L
Publication Date: 2022

Variant appearance in text: 225: A45W
PubMed Link: 36003495
Variant Present in the following documents:
  • table4.xlsx, sheet 1
View BVdb publication page



Pan-Cancer Analysis, Reveals COVID-19-Related BSG as a Novel Marker for Treatment and Identification of Multiple Human Cancers.

Frontiers In Cell And Developmental Biology
Huang, Tao T; He, Wei-Ying WY
Publication Date: 2022

Variant appearance in text: 225: A45W
PubMed Link: 35646943
Variant Present in the following documents:
  • Table1.xlsx, sheet 5
View BVdb publication page



LPAR2 correlated with different prognosis and immune cell infiltration in head and neck squamous cell carcinoma and kidney renal clear cell carcinoma.

Hereditas
Sun, Kai K; Chen, Ri-Xin RX; Li, Jing-Zhang JZ; Luo, Zhan-Xiong ZX
Publication Date: 2022-03-04

Variant appearance in text: 225: A45W
PubMed Link: 35241179
Variant Present in the following documents:
  • 41065_2022_229_MOESM2_ESM.xlsx, sheet 1
View BVdb publication page



Identification of the Nerve-Cancer Cross-Talk-Related Prognostic Gene Model in Head and Neck Squamous Cell Carcinoma.

Frontiers In Oncology
Li, Jun J; Xu, Yunhong Y; Peng, Gang G; Zhu, Kuikui K; Wu, Zilong Z; Shi, Liangliang L; Wu, Gang G
Publication Date: 2021

Variant appearance in text: 225: A45W
PubMed Link: 34912722
Variant Present in the following documents:
  • Table_1.xlsx, sheet 1
View BVdb publication page



Allele-specific genomic data elucidate the role of somatic gain and copy-number neutral loss of heterozygosity in cancer.

Cell Systems
Ciani, Yari Y; Fedrizzi, Tarcisio T; Prandi, Davide D; Lorenzin, Francesca F; Locallo, Alessio A; Gasperini, Paola P; Franceschini, Gian Marco GM; Benelli, Matteo M; Elemento, Olivier O; Fava, Luca L LL; Inga, Alberto A; Demichelis, Francesca F
Publication Date: 2022-02-16

Variant appearance in text: 225: A45W
PubMed Link: 34731645
Variant Present in the following documents:
  • mmc2.xlsx, sheet 1
View BVdb publication page



The spliceosome pathway activity correlates with reduced anti-tumor immunity and immunotherapy response, and unfavorable clinical outcomes in pan-cancer.

Computational And Structural Biotechnology Journal
Chen, Zuobing Z; Chen, Canping C; Li, Lin L; Zhang, Tianfang T; Wang, Xiaosheng X
Publication Date: 2021

Variant appearance in text: 225: A45W
PubMed Link: 34667536
Variant Present in the following documents:
  • mmc3.xlsx, sheet 3
View BVdb publication page



POLE/POLD1 mutation in non-exonuclease domain matters for predicting efficacy of immune-checkpoint-inhibitor therapy.

Clinical And Translational Medicine
Chen, Yan-Xing YX; Wang, Zi-Xian ZX; Yuan, Shu-Qiang SQ; Jiang, Teng-Jia TJ; Huang, You-Sheng YS; Xu, Rui-Hua RH; Wang, Feng F; Zhao, Qi Q
Publication Date: 2021-09

Variant appearance in text: 225: A45W
PubMed Link: 34586735
Variant Present in the following documents:
  • CTM2-11-e524-s001.xlsx, sheet 4
View BVdb publication page



Long noncoding RNA SNHG1 promotes TERT expression by sponging miR-18b-5p in breast cancer.

Cell & Bioscience
Kang, Yujuan Y; Wan, Lin L; Wang, Qin Q; Yin, Yanling Y; Liu, Jiena J; Liu, Lei L; Wu, Hao H; Zhang, Lei L; Zhang, Xin X; Xu, Shouping S; Pang, Da D
Publication Date: 2021-08-31

Variant appearance in text: 225: A45W
PubMed Link: 34465388
Variant Present in the following documents:
  • 13578_2021_675_MOESM4_ESM.pdf
View BVdb publication page



Fast mutual exclusivity algorithm nominates potential synthetic lethal gene pairs through brute force matrix product computations.

Computational And Structural Biotechnology Journal
Fedrizzi, Tarcisio T; Ciani, Yari Y; Lorenzin, Francesca F; Cantore, Thomas T; Gasperini, Paola P; Demichelis, Francesca F
Publication Date: 2021

Variant appearance in text: 225: A45W
PubMed Link: 34429855
Variant Present in the following documents:
  • mmc2.xlsx, sheet 2
View BVdb publication page



Genomic analysis of the prognostic effect of tumor-associated neutrophil-related genes across 15 solid cancer types: an immune perspective.

Annals Of Translational Medicine
Hao, Yuying Y; Hu, Pingping P; Zhang, Jiandong J
Publication Date: 2020-11

Variant appearance in text: 225: A45W
PubMed Link: 33313252
Variant Present in the following documents:
  • atm-08-22-1507-supplementary.pdf
View BVdb publication page



The benefits of smoking cessation on survival in cancer patients by integrative analysis of multi-omics data.

Molecular Oncology
Yang, Sheng S; Liu, Tong T; Liang, Geyu G
Publication Date: 2020-09

Variant appearance in text: 225: A45W
PubMed Link: 32580248
Variant Present in the following documents:
  • MOL2-14-2069-s002.xlsx, sheet 4
View BVdb publication page



APOBEC3A is a prominent cytidine deaminase in breast cancer.

Plos Genetics
Cortez, Luis M LM; Brown, Amber L AL; Dennis, Madeline A MA; Collins, Christopher D CD; Brown, Alexander J AJ; Mitchell, Debra D; Mertz, Tony M TM; Roberts, Steven A SA
Publication Date: 2019-12

Variant appearance in text: 225: A45W
PubMed Link: 31841499
Variant Present in the following documents:
  • pgen.1008545.s016.xlsx, sheet 10
View BVdb publication page



Characterization of long non-coding RNA and messenger RNA profiles in laryngeal cancer by weighted gene co-expression network analysis.

Aging
Liu, Huanhuan H; Sun, Yi Y; Tian, Huan H; Xiao, Xiaolian X; Zhang, Jiaqi J; Wang, Yongzhen Y; Yu, Fengyan F
Publication Date: 2019-11-18

Variant appearance in text: 225: A45W
PubMed Link: 31739287
Variant Present in the following documents:
  • aging-11-102419-s002..xlsx, sheet 1
View BVdb publication page



Global impact of somatic structural variation on the DNA methylome of human cancers.

Genome Biology
Zhang, Yiqun Y; Yang, Lixing L; Kucherlapati, Melanie M; Hadjipanayis, Angela A; Pantazi, Angeliki A; Bristow, Christopher A CA; Lee, Eunjung Alice EA; Mahadeshwar, Harshad S HS; Tang, Jiabin J; Zhang, Jianhua J; Seth, Sahil S; Lee, Semin S; Ren, Xiaojia X; Song, Xingzhi X; Sun, Huandong H; Seidman, Jonathan J; Luquette, Lovelace J LJ; Xi, Ruibin R; Chin, Lynda L; Protopopov, Alexei A; Park, Peter J PJ; Kucherlapati, Raju R; Creighton, Chad J CJ
Publication Date: 2019-10-15

Variant appearance in text: 225: A45W
PubMed Link: 31610796
Variant Present in the following documents:
  • 13059_2019_1818_MOESM2_ESM.xlsx, sheet 1
View BVdb publication page



Construction and integrated analysis of crosstalking ceRNAs networks in laryngeal squamous cell carcinoma.

Peerj
Liu, Yuehui Y; Ye, Fan F
Publication Date: 2019

Variant appearance in text: 225: A45W
PubMed Link: 31367490
Variant Present in the following documents:
  • peerj-07-7380-s001.xlsx, sheet 1
View BVdb publication page



A comprehensive characterization of cis-acting splicing-associated variants in human cancer.

Genome Research
Shiraishi, Yuichi Y; Kataoka, Keisuke K; Chiba, Kenichi K; Okada, Ai A; Kogure, Yasunori Y; Tanaka, Hiroko H; Ogawa, Seishi S; Miyano, Satoru S
Publication Date: 2018-08

Variant appearance in text: 225: A45W
PubMed Link: 30012835
Variant Present in the following documents:
  • supp_gr.231951.117_Supplemental_Table_S2.xlsx, sheet 1
View BVdb publication page



Loss and gain of N-linked glycosylation sequons due to single-nucleotide variation in cancer.

Scientific Reports
Fan, Yu Y; Hu, Yu Y; Yan, Cheng C; Goldman, Radoslav R; Pan, Yang Y; Mazumder, Raja R; Dingerdissen, Hayley M HM
Publication Date: 2018-03-12

Variant appearance in text: 225: A45W
PubMed Link: 29531238
Variant Present in the following documents:
  • 41598_2018_22345_MOESM3_ESM.xlsx, sheet 1
View BVdb publication page



Mutation Clusters from Cancer Exome.

Genes
Kakushadze, Zura Z; Yu, Willie W
Publication Date: 2017-08-15

Variant appearance in text: 225: A45W
PubMed Link: 28809811
Variant Present in the following documents:
  • Main text
  • genes-08-00201.pdf
View BVdb publication page