Publications:

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Integrative proteomic characterization of adenocarcinoma of esophagogastric junction.

Nature Communications

Li, Shengli S; Yuan, Li L; Xu, Zhi-Yuan ZY; Xu, Jing-Li JL; Chen, Gui-Ping GP; Guan, Xiaoqing X; Pan, Guang-Zhao GZ; Hu, Can C; Dong, Jinyun J; Du, Yi-An YA; Yang, Li-Tao LT; Ni, Mao-Wei MW; Jiang, Rui-Bin RB; Zhu, Xiu X; Lv, Hang H; Xu, Han-Dong HD; Zhang, Sheng-Jie SJ; Qin, Jiang-Jiang JJ; Cheng, Xiang-Dong XD

Publication Date: 2023-02-11

Variant appearance in text: 225: Ala45=

PubMed Link: 36774361

Variant Present in the following documents:

• 41467_2023_36462_MOESM5_ESM.xlsx, sheet 1

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Evolutionary route of nasopharyngeal carcinoma metastasis and its clinical significance.

Nature Communications

Lin, Mei M; Zhang, Xiao-Long XL; You, Rui R; Liu, You-Ping YP; Cai, Hong-Min HM; Liu, Li-Zhi LZ; Liu, Xue-Fei XF; Zou, Xiong X; Xie, Yu-Long YL; Zou, Ru-Hai RH; Zhang, Yi-Nuan YN; Sun, Rui R; Feng, Wei-Yi WY; Wang, Hai-Yan HY; Tao, Gui-Hua GH; Li, Hao-Jiang HJ; Huang, Wen-Jie WJ; Zhang, Chao C; Huang, Pei-Yu PY; Wang, Jin J; Zhao, Qi Q; Yang, Qi Q; Zhang, Hong-Wan HW; Liu, Ting T; Li, Hui-Feng HF; Jiang, Xiao-Bing XB; Tang, Jun J; Gu, Yang-Kui YK; Yu, Tao T; Wang, Zhi-Qiang ZQ; Feng, Lin L; Kang, Tie-Bang TB; Zuo, Zhi-Xiang ZX; Chen, Ming-Yuan MY

Publication Date: 2023-02-04

Variant appearance in text: 225: 135T>G

PubMed Link: 36739462

Variant Present in the following documents:

• 41467_2023_35995_MOESM5_ESM.xlsx, sheet 1

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Circular RNA circPOSTN promotes neovascularization by regulating miR-219a-2-3p/STC1 axis and stimulating the secretion of VEGFA in glioblastoma.

Cell Death Discovery

Long, Niya N; Xu, Xu X; Lin, Hongyi H; Lv, Ying Y; Zou, Shenghui S; Cao, Han H; Chen, Xueshu X; Zhao, Yan Y; Qi, Xiaolan X; Yang, Hua H; Liu, Jian J; Chu, Liangzhao L

Publication Date: 2022-08-04

Variant appearance in text: 225: a45a

PubMed Link: 35927233

Variant Present in the following documents:

• 41420_2022_1136_MOESM3_ESM.xlsx, sheet 1

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Decreased INPP5B expression predicts poor prognosis in lung adenocarcinoma.

Cancer Cell International

Deng, Jun J; Lin, Xu X; Li, Qi Q; Cai, Xiao-Yu XY; Wu, Lin-Wen LW; Wang, Wei W; Zhang, Bo B; Li, Yang-Ling YL; Hu, Jian J; Lin, Neng-Ming NM

Publication Date: 2022-05-14

Variant appearance in text: 225: a45a

PubMed Link: 35568951

Variant Present in the following documents:

• 12935_2022_2609_MOESM2_ESM.xls, sheet 2

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P4HA1 Regulates CD31 via COL6A1 in the Transition of Glioblastoma Stem-Like Cells to Tumor Endothelioid Cells.

Frontiers In Oncology

Han, Xiangming X; Wang, Qiyan Q; Fang, Sheng S; Wang, Jialin J; Liu, Fusheng F; Zhang, Junwen J; Jin, Guishan G

Publication Date: 2022

Variant appearance in text: 225: a45a

PubMed Link: 35494018

Variant Present in the following documents:

• Table_1.xlsx, sheet 1

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Site-specific ubiquitination of MLKL targets it to endosomes and targets Listeria and Yersinia to the lysosomes.

Cell Death And Differentiation

Yoon, Seongmin S; Bogdanov, Konstantin K; Wallach, David D

Publication Date: 2022-01-09

Variant appearance in text: 225: A45A

PubMed Link: 34999730

Variant Present in the following documents:

• Main text

View BVdb publication page

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Site-specific ubiquitination of MLKL targets it to endosomes and targets Listeria and Yersinia to the lysosomes.

Cell Death And Differentiation

Yoon, Seongmin S; Bogdanov, Konstantin K; Wallach, David D

Publication Date: 2022-02

Variant appearance in text: 225: A45A

PubMed Link: 34999730

Variant Present in the following documents:

• Main text

View BVdb publication page

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LncRNA Uc003xsl.1-Mediated Activation of the NFκB/IL8 Axis Promotes Progression of Triple-Negative Breast Cancer.

Cancer Research

Xu, Ying Y; Ren, Wei W; Li, Qingjian Q; Duan, Chaohui C; Lin, Xiaorong X; Bi, Zhuofei Z; You, Kaiyun K; Hu, Qian Q; Xie, Ning N; Yu, Yunfang Y; Xu, Xiaoding X; Hu, Hai H; Yao, Herui H

Publication Date: 2022-02-15

Variant appearance in text: 225: A45A

PubMed Link: 34965935

Variant Present in the following documents:

• can-21-1446_supplementary_tables-1_suppst1.xlsx, sheet 3

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Cold and heterogeneous T cell repertoire is associated with copy number aberrations and loss of immune genes in small-cell lung cancer.

Nature Communications

Chen, Ming M; Chen, Runzhe R; Jin, Ying Y; Li, Jun J; Hu, Xin X; Zhang, Jiexin J; Fujimoto, Junya J; Hubert, Shawna M SM; Gay, Carl M CM; Zhu, Bo B; Tian, Yanhua Y; McGranahan, Nicholas N; Lee, Won-Chul WC; George, Julie J; Hu, Xiao X; Chen, Yamei Y; Wu, Meijuan M; Behrens, Carmen C; Chow, Chi-Wan CW; Pham, Hoa H N HHN; Fukuoka, Junya J; Wu, Jia J; Parra, Edwin Roger ER; Little, Latasha D LD; Gumbs, Curtis C; Song, Xingzhi X; Wu, Chang-Jiun CJ; Diao, Lixia L; Wang, Qi Q; Cardnell, Robert R; Zhang, Jianhua J; Wang, Jing J; Le, Xiuning X; Gibbons, Don L DL; Heymach, John V JV; Jack Lee, J J; William, William N WN; Cheng, Chao C; Glisson, Bonnie B; Wistuba, Ignacio I; Andrew Futreal, P P; Thomas, Roman K RK; Reuben, Alexandre A; Byers, Lauren A LA; Zhang, Jianjun J

Publication Date: 2021-11-17

Variant appearance in text: 225: A45A

PubMed Link: 34789716

Variant Present in the following documents:

• 41467_2021_26821_MOESM4_ESM.xlsx, sheet 1

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High expression of PIMREG predicts poor survival outcomes and is correlated with immune infiltrates in lung adenocarcinoma.

Peerj

Jiang, Feng F; Liang, Min M; Huang, Xiaolu X; Shi, Wenjing W; Wang, Yumin Y

Publication Date: 2021

Variant appearance in text: 225: a45a

PubMed Link: 34268011

Variant Present in the following documents:

• peerj-09-11697-s003.xlsx, sheet 1

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Integrated genetic and metabolic landscapes predict vulnerabilities of temozolomide resistant glioblastoma cells.

Npj Systems Biology And Applications

Immanuel, Selva Rupa Christinal SRC; Ghanate, Avinash D AD; Parmar, Dharmeshkumar S DS; Yadav, Ritu R; Uthup, Riya R; Panchagnula, Venkateswarlu V; Raghunathan, Anu A

Publication Date: 2021-01-08

Variant appearance in text: 225: A45A

PubMed Link: 33420045

Variant Present in the following documents:

• 41540_2020_161_MOESM3_ESM.xlsx, sheet 2

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North-Western Himalayan Common Beans: Population Structure and Mapping of Quantitative Anthracnose Resistance Through Genome Wide Association Study.

Frontiers In Plant Science

Banoo, Aqleema A; Nabi, Asha A; Rasool, Rovidha S RS; Mahiya-Farooq, ; Shah, Mehraj D MD; Ahmad, Mushtaq M; Sofi, Parvaze A PA; Aasiya-Nabi, ; Itoo, Hamidullah H; Sharma, P N PN; Padder, Bilal A BA

Publication Date: 2020

Variant appearance in text: 225: 135T>G

PubMed Link: 33123180

Variant Present in the following documents:

• Table_3.xlsx, sheet 1

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Molecular subtyping of glioblastoma based on immune-related genes for prognosis.

Scientific Reports

Chen, Xueran X; Fan, Xiaoqing X; Zhao, Chenggang C; Zhao, Zhiyang Z; Hu, Lizhu L; Wang, Delong D; Wang, Ruiting R; Fang, Zhiyou Z

Publication Date: 2020-09-23

Variant appearance in text: 225: a45a

PubMed Link: 32968155

Variant Present in the following documents:

• 41598_2020_72488_MOESM2_ESM.xls, sheet 11

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circMET promotes NSCLC cell proliferation, metastasis, and immune evasion by regulating the miR-145-5p/CXCL3 axis.

Aging

Pei, Xu X; Chen, Shi-Wei SW; Long, Xiang X; Zhu, Shu-Qiang SQ; Qiu, Bai-Quan BQ; Lin, Kun K; Lu, Feng F; Xu, Jian-Jun JJ; Zhang, Peng-Fei PF; Wu, Yong-Bing YB

Publication Date: 2020-07-02

Variant appearance in text: 225: a45a

PubMed Link: 32614785

Variant Present in the following documents:

• aging-12-103392-s002..xlsx, sheet 1

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PIWI-piRNA pathway-mediated transposable element repression in Hydra somatic stem cells.

Rna (New York, N.Y.)

Teefy, Bryan B BB; Siebert, Stefan S; Cazet, Jack F JF; Lin, Haifan H; Juliano, Celina E CE

Publication Date: 2020-05

Variant appearance in text: 225: A45A

PubMed Link: 32075940

Variant Present in the following documents:

• Main text

View BVdb publication page

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An Immune-Related Signature Predicts Survival in Patients With Lung Adenocarcinoma.

Frontiers In Oncology

Zhang, Minghui M; Zhu, Kaibin K; Pu, Haihong H; Wang, Zhuozhong Z; Zhao, Hongli H; Zhang, Jinfeng J; Wang, Yan Y

Publication Date: 2019

Variant appearance in text: 225: a45a

PubMed Link: 31921619

Variant Present in the following documents:

View BVdb publication page

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Identification of Single Nucleotide Polymorphism in Red Clover (Trifolium pratense L.) Using Targeted Genomic Amplicon Sequencing and RNA-seq.

Frontiers In Plant Science

Li, Wenli W; Riday, Heathcliffe H; Riehle, Christina C; Edwards, Andrea A; Dinkins, Randy R

Publication Date: 2019

Variant appearance in text: 225: Ala45Ala

PubMed Link: 31708937

Variant Present in the following documents:

• DataSheet_2.xlsx, sheet 1

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Integrated multi-omics analysis of genomics, epigenomics, and transcriptomics in ovarian carcinoma.

Aging

Zheng, Mingjun M; Hu, Yuexin Y; Gou, Rui R; Wang, Jing J; Nie, Xin X; Li, Xiao X; Liu, Qing Q; Liu, Juanjuan J; Lin, Bei B

Publication Date: 2019-06-29

Variant appearance in text: 225: a45a

PubMed Link: 31257224

Variant Present in the following documents:

• aging-11-102047-s002.xlsx, sheet 1

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Transcriptomic signature reveals mechanism of flower bud distortion in witches'-broom disease of soybean (Glycine max).

Bmc Plant Biology

Jaiswal, Sarika S; Jadhav, Pravin V PV; Jasrotia, Rahul Singh RS; Kale, Prashant B PB; Kad, Snehal K SK; Moharil, Mangesh P MP; Dudhare, Mahendra S MS; Kheni, Jashminkumar J; Deshmukh, Amit G AG; Mane, Shyamsundar S SS; Nandanwar, Ravindra S RS; Penna, Suprasanna S; Manjaya, Joy G JG; Iquebal, Mir Asif MA; Tomar, Rukam Singh RS; Kawar, Prashant G PG; Rai, Anil A; Kumar, Dinesh D

Publication Date: 2019-01-15

Variant appearance in text: 225: 135T>G

PubMed Link: 30646861

Variant Present in the following documents:

• 12870_2018_1601_MOESM7_ESM.xlsx, sheet 1

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Integrated genomic and metabolomic profiling of ISC1, an emerging Leishmania donovani population in the Indian subcontinent.

Infection, Genetics And Evolution : Journal Of Molecular Epidemiology And Evolutionary Genetics In Infectious Diseases

Cuypers, Bart B; Berg, Maya M; Imamura, Hideo H; Dumetz, Franck F; De Muylder, Géraldine G; Domagalska, Malgorzata A MA; Rijal, Suman S; Bhattarai, Narayan Raj NR; Maes, Ilse I; Sanders, Mandy M; Cotton, James A JA; Meysman, Pieter P; Laukens, Kris K; Dujardin, Jean-Claude JC

Publication Date: 2018-08

Variant appearance in text: 225: 135T>G

PubMed Link: 29679745

Variant Present in the following documents:

• mmc3.xlsx, sheet 1

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Variant discovery in the sheep milk transcriptome using RNA sequencing.

Bmc Genomics

Suárez-Vega, Aroa A; Gutiérrez-Gil, Beatriz B; Klopp, Christophe C; Tosser-Klopp, Gwenola G; Arranz, Juan José JJ

Publication Date: 2017-02-15

Variant appearance in text: 225: Ala45Ala

PubMed Link: 28202015

Variant Present in the following documents:

• 12864_2017_3581_MOESM1_ESM.xlsx, sheet 1

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Recurrent inactivating RASA2 mutations in melanoma.

Nature Genetics

Arafeh, Rand R; Qutob, Nouar N; Emmanuel, Rafi R; Keren-Paz, Alona A; Madore, Jason J; Elkahloun, Abdel A; Wilmott, James S JS; Gartner, Jared J JJ; Di Pizio, Antonella A; Winograd-Katz, Sabina S; Sindiri, Sivasish S; Rotkopf, Ron R; Dutton-Regester, Ken K; Johansson, Peter P; Pritchard, Antonia L AL; Waddell, Nicola N; Hill, Victoria K VK; Lin, Jimmy C JC; Hevroni, Yael Y; Rosenberg, Steven A SA; Khan, Javed J; Ben-Dor, Shifra S; Niv, Masha Y MY; Ulitsky, Igor I; Mann, Graham J GJ; Scolyer, Richard A RA; Hayward, Nicholas K NK; Samuels, Yardena Y

Publication Date: 2015-12

Variant appearance in text: 225: A45A

PubMed Link: 26502337

Variant Present in the following documents:

• NIHMS65345-supplement-Supplementary_table_3.xlsx, sheet 2

View BVdb publication page

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A highly recurrent RPS27 5'UTR mutation in melanoma.

Oncotarget

Dutton-Regester, Ken K; Gartner, Jared J JJ; Emmanuel, Rafi R; Qutob, Nouar N; Davies, Michael A MA; Gershenwald, Jeffrey E JE; Robinson, William W; Robinson, Steven S; Rosenberg, Steven A SA; Scolyer, Richard A RA; Mann, Graham J GJ; Thompson, John F JF; Hayward, Nicholas K NK; Samuels, Yardena Y

Publication Date: 2014-05-30

Variant appearance in text: 225: A45A

PubMed Link: 24913145

Variant Present in the following documents:

• oncotarget-05-2912-s003.xlsx, sheet 1

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