EGR1 c.151_152delinsCG ;(p.A51R)

Variant ID: 5-137801601-GC-CG

NM_001964.2(EGR1):c.151_152delinsCG;(p.A51R)

This variant was identified in 25 publications

View GRCh38 version.




Publications:


Deep learning model accurately classifies metastatic tumors from primary tumors based on mutational signatures.

Scientific Reports
Zheng, Weisheng W; Pu, Mengchen M; Li, Xiaorong X; Du, Zhaolan Z; Jin, Sutong S; Li, Xingshuai X; Zhou, Jielong J; Zhang, Yingsheng Y
Publication Date: 2023-05-30

Variant appearance in text: 225: A51R
PubMed Link: 37253775
Variant Present in the following documents:
  • 41598_2023_35842_MOESM8_ESM.xlsx, sheet 2
  • 41598_2023_35842_MOESM8_ESM.xlsx, sheet 4
View BVdb publication page



Two subtypes of cutaneous melanoma with distinct mutational signatures and clinico-genomic characteristics.

Frontiers In Genetics
Kim, Yoon-Seob YS; Lee, Minho M; Chung, Yeun-Jun YJ
Publication Date: 2022

Variant appearance in text: 225: A51R
PubMed Link: 36246650
Variant Present in the following documents:
  • DataSheet2.xlsx, sheet 3
View BVdb publication page



Kunitz-Type Peptides from Sea Anemones Protect Neuronal Cells against Parkinson's Disease Inductors via Inhibition of ROS Production and ATP-Induced P2X7 Receptor Activation.

International Journal Of Molecular Sciences
Kvetkina, Aleksandra A; Pislyagin, Evgeny E; Menchinskaya, Ekaterina E; Yurchenko, Ekaterina E; Kalina, Rimma R; Kozlovskiy, Sergei S; Kaluzhskiy, Leonid L; Menshov, Alexander A; Kim, Natalia N; Peigneur, Steve S; Tytgat, Jan J; Ivanov, Alexis A; Ayvazyan, Naira N; Leychenko, Elena E; Aminin, Dmitry D
Publication Date: 2022-05-04

Variant appearance in text: 225: Ala51Arg
PubMed Link: 35563513
Variant Present in the following documents:
  • Main text
  • ijms-23-05115.pdf
View BVdb publication page



A platform for oncogenomic reporting and interpretation.

Nature Communications
Reisle, Caralyn C; Williamson, Laura M LM; Pleasance, Erin E; Davies, Anna A; Pellegrini, Brayden B; Bleile, Dustin W DW; Mungall, Karen L KL; Chuah, Eric E; Jones, Martin R MR; Ma, Yussanne Y; Lewis, Eleanor E; Beckie, Isaac I; Pham, David D; Matiello Pletz, Raphael R; Muhammadzadeh, Amir A; Pierce, Brandon M BM; Li, Jacky J; Stevenson, Ross R; Wong, Hansen H; Bailey, Lance L; Reisle, Abbey A; Douglas, Matthew M; Bonakdar, Melika M; Nelson, Jessica M T JMT; Grisdale, Cameron J CJ; Krzywinski, Martin M; Fisic, Ana A; Mitchell, Teresa T; Renouf, Daniel J DJ; Yip, Stephen S; Laskin, Janessa J; Marra, Marco A MA; Jones, Steven J M SJM
Publication Date: 2022-02-09

Variant appearance in text: 225: A51R
PubMed Link: 35140225
Variant Present in the following documents:
  • 41467_2022_28348_MOESM4_ESM.xlsx, sheet 9
View BVdb publication page



Pan-cancer analysis combined with experiments predicts CTHRC1 as a therapeutic target for human cancers.

Cancer Cell International
Peng, Dazhao D; Wei, Cheng C; Zhang, Xiaoyang X; Li, Shenghui S; Liang, Hao H; Zheng, Xingyu X; Jiang, Shulong S; Han, Lei L
Publication Date: 2021-10-26

Variant appearance in text: 225: A51R
PubMed Link: 34702252
Variant Present in the following documents:
  • 12935_2021_2266_MOESM13_ESM.xlsx, sheet 1
View BVdb publication page



The spliceosome pathway activity correlates with reduced anti-tumor immunity and immunotherapy response, and unfavorable clinical outcomes in pan-cancer.

Computational And Structural Biotechnology Journal
Chen, Zuobing Z; Chen, Canping C; Li, Lin L; Zhang, Tianfang T; Wang, Xiaosheng X
Publication Date: 2021

Variant appearance in text: 225: A51R
PubMed Link: 34667536
Variant Present in the following documents:
  • mmc3.xlsx, sheet 3
View BVdb publication page



Long noncoding RNA SNHG1 promotes TERT expression by sponging miR-18b-5p in breast cancer.

Cell & Bioscience
Kang, Yujuan Y; Wan, Lin L; Wang, Qin Q; Yin, Yanling Y; Liu, Jiena J; Liu, Lei L; Wu, Hao H; Zhang, Lei L; Zhang, Xin X; Xu, Shouping S; Pang, Da D
Publication Date: 2021-08-31

Variant appearance in text: 225: A51R
PubMed Link: 34465388
Variant Present in the following documents:
  • 13578_2021_675_MOESM4_ESM.pdf
View BVdb publication page



Reprogramming of bivalent chromatin states in NRAS mutant melanoma suggests PRC2 inhibition as a therapeutic strategy.

Cell Reports
Terranova, Christopher J CJ; Tang, Ming M; Maitituoheti, Mayinuer M; Raman, Ayush T AT; Ghosh, Archit K AK; Schulz, Jonathan J; Amin, Samir B SB; Orouji, Elias E; Tomczak, Katarzyna K; Sarkar, Sharmistha S; Oba, Junna J; Creasy, Caitlin C; Wu, Chang-Jiun CJ; Khan, Samia S; Lazcano, Rossana R; Wani, Khalida K; Singh, Anand A; Barrodia, Praveen P; Zhao, Dongyu D; Chen, Kaifu K; Haydu, Lauren E LE; Wang, Wei-Lien WL; Lazar, Alexander J AJ; Woodman, Scott E SE; Bernatchez, Chantale C; Rai, Kunal K
Publication Date: 2021-07-20

Variant appearance in text: 225: A51R
PubMed Link: 34289358
Variant Present in the following documents:
  • NIHMS1727018-supplement-2.xlsx, sheet 1
View BVdb publication page



Genomic diversity of vaccinia virus strain Cantagalo isolated in southeastern Brazil during the early years of the outbreak, 1999-2006.

Memorias Do Instituto Oswaldo Cruz
Souza, Aline Rv AR; Luques, Matheus Nobrega MN; Damaso, Clarissa R CR
Publication Date: 2021

Variant appearance in text: 225: A51R
PubMed Link: 33566940
Variant Present in the following documents:
  • Main text
  • 1678-8060-mioc-115-e200521.pdf
View BVdb publication page



Genomic analysis of the prognostic effect of tumor-associated neutrophil-related genes across 15 solid cancer types: an immune perspective.

Annals Of Translational Medicine
Hao, Yuying Y; Hu, Pingping P; Zhang, Jiandong J
Publication Date: 2020-11

Variant appearance in text: 225: A51R
PubMed Link: 33313252
Variant Present in the following documents:
  • atm-08-22-1507-supplementary.pdf
View BVdb publication page



Integrated molecular drivers coordinate biological and clinical states in melanoma.

Nature Genetics
Conway, Jake R JR; Dietlein, Felix F; Taylor-Weiner, Amaro A; AlDubayan, Saud S; Vokes, Natalie N; Keenan, Tanya T; Reardon, Brendan B; He, Meng Xiao MX; Margolis, Claire A CA; Weirather, Jason L JL; Haq, Rizwan R; Schilling, Bastian B; Stephen Hodi, F F; Schadendorf, Dirk D; Liu, David D; Van Allen, Eliezer M EM
Publication Date: 2020-12

Variant appearance in text: 225: A51R
PubMed Link: 33230298
Variant Present in the following documents:
  • NIHMS1637640-supplement-SuppData1.xlsx, sheet 1
View BVdb publication page



The mutational landscape of melanoma brain metastases presenting as the first visceral site of recurrence.

British Journal Of Cancer
Rabbie, Roy R; Ferguson, Peter P; Wong, Kim K; Couturier, Dominique-Laurent DL; Moran, Una U; Turner, Clinton C; Emanuel, Patrick P; Haas, Kerstin K; Saunus, Jodi M JM; Davidson, Morgan R MR; Lakhani, Sunil R SR; Shivalingam, Brindha B; Long, Georgina V GV; Parkinson, Christine C; Osman, Iman I; Scolyer, Richard A RA; Corrie, Pippa P; Adams, David J DJ
Publication Date: 2021-01

Variant appearance in text: 225: A51R
PubMed Link: 33024263
Variant Present in the following documents:
  • 41416_2020_1090_MOESM2_ESM.xlsx, sheet 2
View BVdb publication page



TraPS-VarI: Identifying genetic variants altering phosphotyrosine based signalling motifs.

Scientific Reports
Ulaganathan, Vijay Kumar VK
Publication Date: 2020-05-21

Variant appearance in text: 225: A51R
PubMed Link: 32439998
Variant Present in the following documents:
  • 41598_2020_65146_MOESM4_ESM.xlsx, sheet 4
View BVdb publication page



Interplay between DNA damage repair and apoptosis shapes cancer evolution through aneuploidy and microsatellite instability.

Nature Communications
Auslander, Noam N; Wolf, Yuri I YI; Koonin, Eugene V EV
Publication Date: 2020-03-06

Variant appearance in text: 225: A51R
PubMed Link: 32144251
Variant Present in the following documents:
  • 41467_2020_15094_MOESM9_ESM.xlsx, sheet 1
View BVdb publication page



Dynamic transcriptome profiling dataset of vaccinia virus obtained from long-read sequencing techniques.

Gigascience
Tombácz, Dóra D; Prazsák, István I; Szucs, Attila A; Dénes, Béla B; Snyder, Michael M; Boldogkoi, Zsolt Z
Publication Date: 2018-12-01

Variant appearance in text: 225: a51r
PubMed Link: 30476066
Variant Present in the following documents:
  • giy139_giga-d-18-00175_revision_1.pdf
View BVdb publication page



Loss and gain of N-linked glycosylation sequons due to single-nucleotide variation in cancer.

Scientific Reports
Fan, Yu Y; Hu, Yu Y; Yan, Cheng C; Goldman, Radoslav R; Pan, Yang Y; Mazumder, Raja R; Dingerdissen, Hayley M HM
Publication Date: 2018-03-12

Variant appearance in text: 225: A51R
PubMed Link: 29531238
Variant Present in the following documents:
  • 41598_2018_22345_MOESM3_ESM.xlsx, sheet 1
View BVdb publication page



Identification of potentially oncogenic alterations from tumor-only samples reveals Fanconi anemia pathway mutations in bladder carcinomas.

Npj Genomic Medicine
Madubata, Chioma J CJ; Roshan-Ghias, Alireza A; Chu, Timothy T; Resnick, Samuel S; Zhao, Junfei J; Arnes, Luis L; Wang, Jiguang J; Rabadan, Raul R
Publication Date: 2017

Variant appearance in text: 225: A51R
PubMed Link: 29263839
Variant Present in the following documents:
  • 41525_2017_32_MOESM8_ESM.xlsx, sheet 6
View BVdb publication page



Mutation Clusters from Cancer Exome.

Genes
Kakushadze, Zura Z; Yu, Willie W
Publication Date: 2017-08-15

Variant appearance in text: 225: A51R
PubMed Link: 28809811
Variant Present in the following documents:
  • Main text
View BVdb publication page



T cell antigen discovery using soluble vaccinia proteome reveals recognition of antigens with both virion and nonvirion association.

Journal Of Immunology (Baltimore, Md. : 1950)
Davies, D Huw DH; Chun, Sookhee S; Hermanson, Gary G; Tucker, Jo Anne JA; Jain, Aarti A; Nakajima, Rie R; Pablo, Jozelyn J; Felgner, Philip L PL; Liang, Xiaowu X
Publication Date: 2014-08-15

Variant appearance in text: 225: A51R
PubMed Link: 25024392
Variant Present in the following documents:
  • Main text
View BVdb publication page



Comparative analysis of the complete genome sequence of the California MSW strain of myxoma virus reveals potential host adaptations.

Journal Of Virology
Kerr, Peter J PJ; Rogers, Matthew B MB; Fitch, Adam A; Depasse, Jay V JV; Cattadori, Isabella M IM; Hudson, Peter J PJ; Tscharke, David C DC; Holmes, Edward C EC; Ghedin, Elodie E
Publication Date: 2013-11

Variant appearance in text: 225: A51R
PubMed Link: 23986601
Variant Present in the following documents:
  • Main text
View BVdb publication page



The genome of Yoka poxvirus.

Journal Of Virology
Zhao, Guoyan G; Droit, Lindsay L; Tesh, Robert B RB; Popov, Vsevolod L VL; Little, Nicole S NS; Upton, Chris C; Virgin, Herbert W HW; Wang, David D
Publication Date: 2011-10

Variant appearance in text: 225: A51R
PubMed Link: 21813608
Variant Present in the following documents:
  • Main text
View BVdb publication page



Quantitative peptide binding motifs for 19 human and mouse MHC class I molecules derived using positional scanning combinatorial peptide libraries.

Immunome Research
Sidney, John J; Assarsson, Erika E; Moore, Carrie C; Ngo, Sandy S; Pinilla, Clemencia C; Sette, Alessandro A; Peters, Bjoern B
Publication Date: 2008-01-25

Variant appearance in text: 225: A51R
PubMed Link: 18221540
Variant Present in the following documents:
  • 1745-7580-4-2-S3.xls, sheet 1
View BVdb publication page



Genomic sequence and analysis of a vaccinia virus isolate from a patient with a smallpox vaccine-related complication.

Virology Journal
Li, Guiyun G; Chen, Nanhai N; Feng, Zehua Z; Buller, R Mark L RM; Osborne, John J; Harms, Tiara T; Damon, Inger I; Upton, Chris C; Esteban, David J DJ
Publication Date: 2006-10-25

Variant appearance in text: 225: A51R
PubMed Link: 17062162
Variant Present in the following documents:
  • Main text
  • 1743-422X-3-88.pdf
  • 1743-422X-3-88-S1.pdf
View BVdb publication page



Analysis of the monkeypox virus genome.

Virology
Shchelkunov, S N SN; Totmenin, A V AV; Safronov, P F PF; Mikheev, M V MV; Gutorov, V V VV; Ryazankina, O I OI; Petrov, N A NA; Babkin, I V IV; Uvarova, E A EA; Sandakhchiev, L S LS; Sisler, J R JR; Esposito, J J JJ; Damon, I K IK; Jahrling, P B PB; Moss, B B
Publication Date: 2002-06-05

Variant appearance in text: 225: A51R
PubMed Link: 12083817
Variant Present in the following documents:
  • main.pdf
View BVdb publication page