Publications:

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Identification of cuproptosis-related subtypes, characterization of tumor microenvironment infiltration, and development of a prognosis model in breast cancer.

Frontiers In Immunology

Li, Zhi Z; Zhang, Hua H; Wang, Xixi X; Wang, Qun Q; Xue, Jiapeng J; Shi, Yun Y; Wang, Minghua M; Wang, Geng G; Zhang, Jianquan J

Publication Date: 2022

Variant appearance in text: 225: A54N

PubMed Link: 36059516

Variant Present in the following documents:

• DataSheet_2.xlsx, sheet 6

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The clinical significance of integrin subunit alpha V in cancers: from small cell lung carcinoma to pan-cancer.

Bmc Pulmonary Medicine

Tang, Yu-Lu YL; Li, Guo-Sheng GS; Li, Dong-Ming DM; Tang, Deng D; Huang, Jie-Zhuang JZ; Feng, Hao H; He, Rong-Quan RQ; Huang, Zhi-Guang ZG; Dang, Yi-Wu YW; Kong, Jin-Liang JL; Gan, Ting-Qing TQ; Zhou, Hua-Fu HF; Zeng, Jing-Jing JJ; Chen, Gang G

Publication Date: 2022-08-04

Variant appearance in text: 225: A54N

PubMed Link: 35927660

Variant Present in the following documents:

• 12890_2022_2095_MOESM2_ESM.xlsx, sheet 2

View BVdb publication page

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Pan-Cancer Analysis, Reveals COVID-19-Related BSG as a Novel Marker for Treatment and Identification of Multiple Human Cancers.

Frontiers In Cell And Developmental Biology

Huang, Tao T; He, Wei-Ying WY

Publication Date: 2022

Variant appearance in text: 225: A54N

PubMed Link: 35646943

Variant Present in the following documents:

• Table1.xlsx, sheet 5

View BVdb publication page

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Lift the Veil of Breast Cancers Using 4 or Fewer Critical Genes.

Cancer Informatics

Zhang, Zhengjun Z

Publication Date: 2022

Variant appearance in text: 225: A54N

PubMed Link: 35185329

Variant Present in the following documents:

• sj-pdf-1-cix-10.1177_11769351221076360.pdf

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The spliceosome pathway activity correlates with reduced anti-tumor immunity and immunotherapy response, and unfavorable clinical outcomes in pan-cancer.

Computational And Structural Biotechnology Journal

Chen, Zuobing Z; Chen, Canping C; Li, Lin L; Zhang, Tianfang T; Wang, Xiaosheng X

Publication Date: 2021

Variant appearance in text: 225: A54N

PubMed Link: 34667536

Variant Present in the following documents:

• mmc3.xlsx, sheet 3

View BVdb publication page

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Long noncoding RNA SNHG1 promotes TERT expression by sponging miR-18b-5p in breast cancer.

Cell & Bioscience

Kang, Yujuan Y; Wan, Lin L; Wang, Qin Q; Yin, Yanling Y; Liu, Jiena J; Liu, Lei L; Wu, Hao H; Zhang, Lei L; Zhang, Xin X; Xu, Shouping S; Pang, Da D

Publication Date: 2021-08-31

Variant appearance in text: 225: A54N

PubMed Link: 34465388

Variant Present in the following documents:

• 13578_2021_675_MOESM4_ESM.pdf

View BVdb publication page

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Genomic analysis of the prognostic effect of tumor-associated neutrophil-related genes across 15 solid cancer types: an immune perspective.

Annals Of Translational Medicine

Hao, Yuying Y; Hu, Pingping P; Zhang, Jiandong J

Publication Date: 2020-11

Variant appearance in text: 225: A54N

PubMed Link: 33313252

Variant Present in the following documents:

• atm-08-22-1507-supplementary.pdf

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Wide-ranging analysis of survival-related alternative splicing events in invasive breast carcinoma.

Oncology Letters

Jia, Keren K; Wu, Yingcheng Y; Huang, Jing J; Chen, Jianing J; Wei, Huagen H; Wu, Huiqun H

Publication Date: 2020-08

Variant appearance in text: 225: A54N

PubMed Link: 32724430

Variant Present in the following documents:

• Supplementary_Data.pdf

View BVdb publication page

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CNApp, a tool for the quantification of copy number alterations and integrative analysis revealing clinical implications.

Elife

Franch-Expósito, Sebastià S; Bassaganyas, Laia L; Vila-Casadesús, Maria M; Hernández-Illán, Eva E; Esteban-Fabró, Roger R; Díaz-Gay, Marcos M; Lozano, Juan José JJ; Castells, Antoni A; Llovet, Josep Maria JM; Castellví-Bel, Sergi S; Camps, Jordi J

Publication Date: 2020-01-15

Variant appearance in text: 225: A54N

PubMed Link: 31939734

Variant Present in the following documents:

• elife-50267-fig1-figsupp1-data1.xlsx, sheet 1

View BVdb publication page

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APOBEC3A is a prominent cytidine deaminase in breast cancer.

Plos Genetics

Cortez, Luis M LM; Brown, Amber L AL; Dennis, Madeline A MA; Collins, Christopher D CD; Brown, Alexander J AJ; Mitchell, Debra D; Mertz, Tony M TM; Roberts, Steven A SA

Publication Date: 2019-12

Variant appearance in text: 225: A54N

PubMed Link: 31841499

Variant Present in the following documents:

• pgen.1008545.s016.xlsx, sheet 7

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Negative Regulation of BOK Expression by Recruitment of TRIM28 to Regulatory Elements in Its 3' Untranslated Region.

Iscience

Fernandez-Marrero, Yuniel Y; Bachmann, Daniel D; Lauber, Emanuel E; Kaufmann, Thomas T

Publication Date: 2018-11-30

Variant appearance in text: 225: A54N

PubMed Link: 30471638

Variant Present in the following documents:

• mmc3.xlsx, sheet 1

View BVdb publication page

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A comprehensive characterization of cis-acting splicing-associated variants in human cancer.

Genome Research

Shiraishi, Yuichi Y; Kataoka, Keisuke K; Chiba, Kenichi K; Okada, Ai A; Kogure, Yasunori Y; Tanaka, Hiroko H; Ogawa, Seishi S; Miyano, Satoru S

Publication Date: 2018-08

Variant appearance in text: 225: A54N

PubMed Link: 30012835

Variant Present in the following documents:

• supp_gr.231951.117_Supplemental_Table_S2.xlsx, sheet 1

View BVdb publication page

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Mutation Clusters from Cancer Exome.

Genes

Kakushadze, Zura Z; Yu, Willie W

Publication Date: 2017-08-15

Variant appearance in text: 225: A54N

PubMed Link: 28809811

Variant Present in the following documents:

• Main text
• genes-08-00201.pdf

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Characterization of activating mutations of NOTCH3 in T-cell acute lymphoblastic leukemia and anti-leukemic activity of NOTCH3 inhibitory antibodies.

Oncogene

Bernasconi-Elias, P P; Hu, T T; Jenkins, D D; Firestone, B B; Gans, S S; Kurth, E E; Capodieci, P P; Deplazes-Lauber, J J; Petropoulos, K K; Thiel, P P; Ponsel, D D; Hee Choi, S S; LeMotte, P P; London, A A; Goetcshkes, M M; Nolin, E E; Jones, M D MD; Slocum, K K; Kluk, M J MJ; Weinstock, D M DM; Christodoulou, A A; Weinberg, O O; Jaehrling, J J; Ettenberg, S A SA; Buckler, A A; Blacklow, S C SC; Aster, J C JC; Fryer, C J CJ

Publication Date: 2016-11-24

Variant appearance in text: 225: A54N

PubMed Link: 27157619

Variant Present in the following documents:

• NIHMS766844-supplement-11.pdf

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Dissecting tRNA-derived fragment complexities using personalized transcriptomes reveals novel fragment classes and unexpected dependencies.

Oncotarget

Telonis, Aristeidis G AG; Loher, Phillipe P; Honda, Shozo S; Jing, Yi Y; Palazzo, Juan J; Kirino, Yohei Y; Rigoutsos, Isidore I

Publication Date: 2015-09-22

Variant appearance in text: 225: A54N

PubMed Link: 26325506

Variant Present in the following documents:

• oncotarget-06-24797-s002.xlsx, sheet 3

View BVdb publication page

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