EGR1 c.172_173delinsGC ;(p.S58A)

Variant ID: 5-137801622-AG-GC

NM_001964.2(EGR1):c.172_173delinsGC;(p.S58A)

This variant was identified in 12 publications

View GRCh38 version.




Publications:


Accurate positioning of functional residues with robotics-inspired computational protein design.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Krivacic, Cody C; Kundert, Kale K; Pan, Xingjie X; Pache, Roland A RA; Liu, Lin L; Conchúir, Shane O SO; Jeliazkov, Jeliazko R JR; Gray, Jeffrey J JJ; Thompson, Michael C MC; Fraser, James S JS; Kortemme, Tanja T
Publication Date: 2022-03-15

Variant appearance in text: 225: S58A
PubMed Link: 35254891
Variant Present in the following documents:
  • pnas.2115480119.sapp.pdf
View BVdb publication page



Structural basis of transcription activation by the global regulator Spx.

Nucleic Acids Research
Shi, Jing J; Li, Fangfang F; Wen, Aijia A; Yu, Libing L; Wang, Lu L; Wang, Fulin F; Jin, Yuanling Y; Jin, Sha S; Feng, Yu Y; Lin, Wei W
Publication Date: 2021-10-11

Variant appearance in text: 225: S58A
PubMed Link: 34530448
Variant Present in the following documents:
  • gkab790_supplemental_file.pdf
View BVdb publication page



A large peptidome dataset improves HLA class I epitope prediction across most of the human population.

Nature Biotechnology
Sarkizova, Siranush S; Klaeger, Susan S; Le, Phuong M PM; Li, Letitia W LW; Oliveira, Giacomo G; Keshishian, Hasmik H; Hartigan, Christina R CR; Zhang, Wandi W; Braun, David A DA; Ligon, Keith L KL; Bachireddy, Pavan P; Zervantonakis, Ioannis K IK; Rosenbluth, Jennifer M JM; Ouspenskaia, Tamara T; Law, Travis T; Justesen, Sune S; Stevens, Jonathan J; Lane, William J WJ; Eisenhaure, Thomas T; Lan Zhang, Guang G; Clauser, Karl R KR; Hacohen, Nir N; Carr, Steven A SA; Wu, Catherine J CJ; Keskin, Derin B DB
Publication Date: 2020-02

Variant appearance in text: 225: S58A
PubMed Link: 31844290
Variant Present in the following documents:
  • NIHMS1541512-supplement-Sup_Data1.xlsx, sheet 26
  • NIHMS1541512-supplement-Sup_Data1.xlsx, sheet 31
  • NIHMS1541512-supplement-Sup_Data2.xlsx, sheet 3
  • NIHMS1541512-supplement-Sup_Data1.xlsx, sheet 83
  • NIHMS1541512-supplement-Sup_Data1.xlsx, sheet 15
  • NIHMS1541512-supplement-Sup_Data1.xlsx, sheet 18
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Identification of Single Nucleotide Polymorphism in Red Clover (Trifolium pratense L.) Using Targeted Genomic Amplicon Sequencing and RNA-seq.

Frontiers In Plant Science
Li, Wenli W; Riday, Heathcliffe H; Riehle, Christina C; Edwards, Andrea A; Dinkins, Randy R
Publication Date: 2019

Variant appearance in text: 225: Ser58Ala
PubMed Link: 31708937
Variant Present in the following documents:
  • DataSheet_2.xlsx, sheet 1
View BVdb publication page



Distinctive mutational spectrum and karyotype disruption in long-term cisplatin-treated urothelial carcinoma cell lines.

Scientific Reports
Skowron, Margaretha A MA; Petzsch, Patrick P; Hardt, Karin K; Wagner, Nicholas N; Beier, Manfred M; Stepanow, Stefanie S; Drechsler, Matthias M; Rieder, Harald H; Köhrer, Karl K; Niegisch, Günter G; Hoffmann, Michèle J MJ; Schulz, Wolfgang A WA
Publication Date: 2019-10-09

Variant appearance in text: 225: S58A
PubMed Link: 31597922
Variant Present in the following documents:
  • 41598_2019_50891_MOESM4_ESM.xlsx, sheet 1
  • 41598_2019_50891_MOESM7_ESM.xlsx, sheet 1
  • 41598_2019_50891_MOESM8_ESM.xlsx, sheet 1
View BVdb publication page



Transcriptomic signature reveals mechanism of flower bud distortion in witches'-broom disease of soybean (Glycine max).

Bmc Plant Biology
Jaiswal, Sarika S; Jadhav, Pravin V PV; Jasrotia, Rahul Singh RS; Kale, Prashant B PB; Kad, Snehal K SK; Moharil, Mangesh P MP; Dudhare, Mahendra S MS; Kheni, Jashminkumar J; Deshmukh, Amit G AG; Mane, Shyamsundar S SS; Nandanwar, Ravindra S RS; Penna, Suprasanna S; Manjaya, Joy G JG; Iquebal, Mir Asif MA; Tomar, Rukam Singh RS; Kawar, Prashant G PG; Rai, Anil A; Kumar, Dinesh D
Publication Date: 2019-01-15

Variant appearance in text: 225: Ser58Ala
PubMed Link: 30646861
Variant Present in the following documents:
  • 12870_2018_1601_MOESM7_ESM.xlsx, sheet 1
View BVdb publication page



The role of traction in membrane curvature generation.

Molecular Biology Of The Cell
Alimohamadi, H H; Vasan, R R; Hassinger, J E JE; Stachowiak, J C JC; Rangamani, P P
Publication Date: 2018-08-08

Variant appearance in text: 225: S58a
PubMed Link: 30044708
Variant Present in the following documents:
  • mbc-29-2024-s001.pdf
View BVdb publication page



KRAB-type zinc-finger proteins PITA and PISA specifically regulate p53-dependent glycolysis and mitochondrial respiration.

Cell Research
Wang, Shan S; Peng, Zhiqiang Z; Wang, Siying S; Yang, Lihua L; Chen, Yuhan Y; Kong, Xue X; Song, Shanshan S; Pei, Pei P; Tian, Chunyan C; Yan, Hui H; Ding, Peipei P; Hu, Weiguo W; Liu, Cui Hua CH; Zhang, Xin X; He, Fuchu F; Zhang, Lingqiang L
Publication Date: 2018-05

Variant appearance in text: 225: S58A
PubMed Link: 29467382
Variant Present in the following documents:
View BVdb publication page



Three-dimensional modelling identifies novel genetic dependencies associated with breast cancer progression in the isogenic MCF10 model.

The Journal Of Pathology
Maguire, Sarah L SL; Peck, Barrie B; Wai, Patty T PT; Campbell, James J; Barker, Holly H; Gulati, Aditi A; Daley, Frances F; Vyse, Simon S; Huang, Paul P; Lord, Christopher J CJ; Farnie, Gillian G; Brennan, Keith K; Natrajan, Rachael R
Publication Date: 2016-11

Variant appearance in text: 225: S58A
PubMed Link: 27512948
Variant Present in the following documents:
  • PATH-240-315-s015.xlsx, sheet 1
View BVdb publication page



Generation of a High Number of Healthy Erythroid Cells from Gene-Edited Pyruvate Kinase Deficiency Patient-Specific Induced Pluripotent Stem Cells.

Stem Cell Reports
Garate, Zita Z; Quintana-Bustamante, Oscar O; Crane, Ana M AM; Olivier, Emmanuel E; Poirot, Laurent L; Galetto, Roman R; Kosinski, Penelope P; Hill, Collin C; Kung, Charles C; Agirre, Xabi X; Orman, Israel I; Cerrato, Laura L; Alberquilla, Omaira O; Rodriguez-Fornes, Fatima F; Fusaki, Noemi N; Garcia-Sanchez, Felix F; Maia, Tabita M TM; Ribeiro, Maria L ML; Sevilla, Julian J; Prosper, Felipe F; Jin, Shengfang S; Mountford, Joanne J; Guenechea, Guillermo G; Gouble, Agnes A; Bueren, Juan A JA; Davis, Brian R BR; Segovia, Jose C JC
Publication Date: 2015-12-08

Variant appearance in text: 225: S58A
PubMed Link: 26549847
Variant Present in the following documents:
  • mmc3.xlsx, sheet 2
  • mmc3.xlsx, sheet 1
  • mmc3.xlsx, sheet 3
View BVdb publication page



Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica.

The Biochemical Journal
Lemak, Sofia S; Tchigvintsev, Anatoli A; Petit, Pierre P; Flick, Robert R; Singer, Alexander U AU; Brown, Greg G; Evdokimova, Elena E; Egorova, Olga O; Gonzalez, Claudio F CF; Chernikova, Tatyana N TN; Yakimov, Michail M MM; Kube, Michael M; Reinhardt, Richard R; Golyshin, Peter N PN; Savchenko, Alexei A; Yakunin, Alexander F AF
Publication Date: 2012-07-15

Variant appearance in text: 225: S58A
PubMed Link: 22519667
Variant Present in the following documents:
  • Main text
View BVdb publication page