Publications:

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Phylogenomic Analysis of Salmonella enterica Serovar Indiana ST17, an Emerging Multidrug-Resistant Clone in China.

Microbiology Spectrum

Zhang, Zengfeng Z; Chang, Jiang J; Xu, Xuebin X; Hu, Mengjun M; He, Shoukui S; Qin, Xiaojie X; Zhou, Min M; Shi, Chunlei C; Shi, Xianming X

Publication Date: 2022-08-31

Variant appearance in text: 225: S80R

PubMed Link: 35862948

Variant Present in the following documents:

• spectrum.00115-22-s0001.pdf

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Global population structure of the Serratia marcescens complex and identification of hospital-adapted lineages in the complex.

Microbial Genomics

Ono, Tomoyuki T; Taniguchi, Itsuki I; Nakamura, Keiji K; Nagano, Debora Satie DS; Nishida, Ruriko R; Gotoh, Yasuhiro Y; Ogura, Yoshitoshi Y; Sato, Mitsuhiko P MP; Iguchi, Atsushi A; Murase, Kazunori K; Yoshimura, Dai D; Itoh, Takehiko T; Shima, Ayaka A; Dubois, Damien D; Oswald, Eric E; Shiose, Akira A; Gotoh, Naomasa N; Hayashi, Tetsuya T

Publication Date: 2022-03

Variant appearance in text: 225: Ser80Arg

PubMed Link: 35315751

Variant Present in the following documents:

• Main text
• mgen-8-0793.pdf

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KLF3 and PAX6 are candidate driver genes in late-stage, MSI-hypermutated endometrioid endometrial carcinomas.

Plos One

Rudd, Meghan L ML; Hansen, Nancy F NF; Zhang, Xiaolu X; Urick, Mary Ellen ME; Zhang, Suiyuan S; Merino, Maria J MJ; , ; Mullikin, James C JC; Brody, Lawrence C LC; Bell, Daphne W DW

Publication Date: 2022

Variant appearance in text: 225: S80R

PubMed Link: 35081118

Variant Present in the following documents:

• pone.0251286.s005.xlsx, sheet 8

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KLF3 and PAX6 are candidate driver genes in late-stage, MSI-hypermutated endometrioid endometrial carcinomas.

Plos One

Rudd, Meghan L ML; Hansen, Nancy F NF; Zhang, Xiaolu X; Urick, Mary Ellen ME; Zhang, Suiyuan S; Merino, Maria J MJ; , ; Mullikin, James C JC; Brody, Lawrence C LC; Bell, Daphne W DW

Publication Date: 2022

Variant appearance in text: 225: S80R

PubMed Link: 35081118

Variant Present in the following documents:

• pone.0251286.s005.xlsx, sheet 8

View BVdb publication page

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Prevalence of genotypic antimicrobial resistance in clinical Shiga toxin-producing Escherichia coli in Norway, 2018 to 2020.

Journal Of Medical Microbiology

Ramstad, Silje N SN; Brandal, Lin T LT; Taxt, Arne M AM; Wasteson, Yngvild Y; Bjørnholt, Jørgen V JV; Naseer, Umaer U

Publication Date: 2021-12

Variant appearance in text: 225: S80R

PubMed Link: 34870582

Variant Present in the following documents:

• Main text
• jmm-70-1454.pdf

View BVdb publication page

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Prevalence of genotypic antimicrobial resistance in clinical Shiga toxin-producing Escherichia coli in Norway, 2018 to 2020.

Journal Of Medical Microbiology

Ramstad, Silje N SN; Brandal, Lin T LT; Taxt, Arne M AM; Wasteson, Yngvild Y; Bjørnholt, Jørgen V JV; Naseer, Umaer U

Publication Date: 2021-12

Variant appearance in text: 225: S80R

PubMed Link: 34870582

Variant Present in the following documents:

• Main text
• jmm-70-1454.pdf

View BVdb publication page

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Notch signaling and efficacy of PD-1/PD-L1 blockade in relapsed small cell lung cancer.

Nature Communications

Roper, Nitin N; Velez, Moises J MJ; Chiappori, Alberto A; Kim, Yoo Sun YS; Wei, Jun S JS; Sindiri, Sivasish S; Takahashi, Nobuyuki N; Mulford, Deborah D; Kumar, Suresh S; Ylaya, Kris K; Trindade, Christopher C; Manukyan, Irena I; Brown, Anna-Leigh AL; Trepel, Jane B JB; Lee, Jung-Min JM; Hewitt, Stephen S; Khan, Javed J; Thomas, Anish A

Publication Date: 2021-06-23

Variant appearance in text: 225: S80R

PubMed Link: 34162872

Variant Present in the following documents:

• 41467_2021_24164_MOESM3_ESM.xlsx, sheet 2

View BVdb publication page

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Pan-cancer analysis of CD274 (PD-L1) mutations in 314,631 patient samples and subset correlation with PD-L1 protein expression.

Journal For Immunotherapy Of Cancer

Huang, Richard S P RSP; Decker, Brennan B; Murugesan, Karthikeyan K; Hiemenz, Matthew M; Mata, Douglas A DA; Li, Gerald G; Creeden, James J; Ramkissoon, Shakti H SH; Ross, Jeffrey S JS

Publication Date: 2021-06

Variant appearance in text: 225: S80R

PubMed Link: 34130989

Variant Present in the following documents:

• jitc-2021-002558supp001.pdf

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Diversity of Serotype, Genotype, and Antibiotic Susceptibility of Salmonella Prevalent in Pickled Ready-to-Eat Meat.

Frontiers In Microbiology

Wang, Jiawei J; Sheng, Huanjing H; Xu, Weili W; Huang, Jinling J; Meng, Lingyuan L; Cao, Chenyang C; Zeng, Jie J; Meng, Jianghong J; Yang, Baowei B

Publication Date: 2019

Variant appearance in text: 225: Ser80Arg

PubMed Link: 31781073

Variant Present in the following documents:

• Main text

View BVdb publication page

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Identification of Single Nucleotide Polymorphism in Red Clover (Trifolium pratense L.) Using Targeted Genomic Amplicon Sequencing and RNA-seq.

Frontiers In Plant Science

Li, Wenli W; Riday, Heathcliffe H; Riehle, Christina C; Edwards, Andrea A; Dinkins, Randy R

Publication Date: 2019

Variant appearance in text: 225: 238A>C

PubMed Link: 31708937

Variant Present in the following documents:

• DataSheet_2.xlsx, sheet 1

View BVdb publication page

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Occurrence and Characterization of mcr-1-Positive Escherichia coli Isolated From Food-Producing Animals in Poland, 2011-2016.

Frontiers In Microbiology

Zając, Magdalena M; Sztromwasser, Paweł P; Bortolaia, Valeria V; Leekitcharoenphon, Pimlapas P; Cavaco, Lina M LM; Ziȩtek-Barszcz, Anna A; Hendriksen, Rene S RS; Wasyl, Dariusz D

Publication Date: 2019

Variant appearance in text: 225: S80R

PubMed Link: 31440216

Variant Present in the following documents:

• Main text

View BVdb publication page

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Prevalence of Salmonella Isolates from Chicken and Pig Slaughterhouses and Emergence of Ciprofloxacin and Cefotaxime Co-Resistant S. enterica Serovar Indiana in Henan, China.

Plos One

Bai, Li L; Lan, Ruiting R; Zhang, Xiuli X; Cui, Shenghui S; Xu, Jin J; Guo, Yunchang Y; Li, Fengqin F; Zhang, Ding D

Publication Date: 2015

Variant appearance in text: 225: S80R

PubMed Link: 26650239

Variant Present in the following documents:

• pone.0144532.pdf

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Epidemiology of plasmid-mediated quinolone resistance in salmonella enterica serovar typhimurium isolates from food-producing animals in Japan.

Gut Pathogens

Asai, Tetsuo T; Sato, Chizuru C; Masani, Kaori K; Usui, Masaru M; Ozawa, Manao M; Ogino, Tomoe T; Aoki, Hiroshi H; Sawada, Takuo T; Izumiya, Hidemasa H; Watanabe, Haruo H

Publication Date: 2010-12-07

Variant appearance in text: 225: S80R

PubMed Link: 21138594

Variant Present in the following documents:

• Main text
• 1757-4749-2-17.pdf

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