EGR1 c.268G>T ;(p.A90S)

Variant ID: 5-137801718-G-T

NM_001964.2(EGR1):c.268G>T;(p.A90S)

This variant was identified in 14 publications

View GRCh38 version.




Publications:


Deep learning model accurately classifies metastatic tumors from primary tumors based on mutational signatures.

Scientific Reports
Zheng, Weisheng W; Pu, Mengchen M; Li, Xiaorong X; Du, Zhaolan Z; Jin, Sutong S; Li, Xingshuai X; Zhou, Jielong J; Zhang, Yingsheng Y
Publication Date: 2023-05-30

Variant appearance in text: 225: A90S
PubMed Link: 37253775
Variant Present in the following documents:
  • 41598_2023_35842_MOESM8_ESM.xlsx, sheet 1
View BVdb publication page



Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery.

Nature Communications
Havugimana, Pierre C PC; Goel, Raghuveera Kumar RK; Phanse, Sadhna S; Youssef, Ahmed A; Padhorny, Dzmitry D; Kotelnikov, Sergei S; Kozakov, Dima D; Emili, Andrew A
Publication Date: 2022-07-13

Variant appearance in text: 225: 268G>T
PubMed Link: 35831314
Variant Present in the following documents:
  • 41467_2022_31809_MOESM8_ESM.xlsx, sheet 3
View BVdb publication page



A SARS-CoV-2 Delta variant containing mutation in the probe binding region used for RT-qPCR test in Japan exhibited atypical PCR amplification and might induce false negative result.

Journal Of Infection And Chemotherapy : Official Journal Of The Japan Society Of Chemotherapy
Rajib, Samiul Alam SA; Ogi, Yasuhiro Y; Hossain, Md Belal MB; Ikeda, Terumasa T; Tanaka, Eiichi E; Kawaguchi, Tatsuya T; Satou, Yorifumi Y
Publication Date: 2022-05

Variant appearance in text: 225: A90S
PubMed Link: 35144878
Variant Present in the following documents:
  • mmc2.xls, sheet 1
View BVdb publication page



Cross-sectional genomic perspective of epidemic waves of SARS-CoV-2: A pan India study.

Virus Research
Kumar, Sanjeet S; Bansal, Kanika K
Publication Date: 2022-01-15

Variant appearance in text: 225: A90S
PubMed Link: 34822953
Variant Present in the following documents:
  • mmc4.xlsx, sheet 1
View BVdb publication page



Cross-sectional genomic perspective of epidemic waves of SARS-CoV-2: A pan India study.

Virus Research
Kumar, Sanjeet S; Bansal, Kanika K
Publication Date: 2021-11-22

Variant appearance in text: 225: A90S
PubMed Link: 34822953
Variant Present in the following documents:
  • mmc4.xlsx, sheet 1
View BVdb publication page



Characterization of the SARS-CoV-2 genomes in Egypt in first and second waves of infection.

Scientific Reports
Zekri, Abdel-Rahman N AN; Bahnasy, Abeer A AA; Hafez, Mohamed M MM; Hassan, Zeinab K ZK; Ahmed, Ola S OS; Soliman, Hany K HK; El-Sisi, Enas R ER; Dine, Mona H Salah El MHSE; Solimane, May S MS; Latife, Lamyaa S Abdel LSA; Seadawy, Mohamed G MG; Elsafty, Ahmed S AS; Abouelhoda, Mohamed M
Publication Date: 2021-11-03

Variant appearance in text: 225: 268G>T
PubMed Link: 34732835
Variant Present in the following documents:
  • 41598_2021_99014_MOESM1_ESM.xlsx, sheet 1
View BVdb publication page



Significance of CD8+ T cell infiltration-related biomarkers and the corresponding prediction model for the prognosis of kidney renal clear cell carcinoma.

Aging
Tian, Yuan Y; Wei, Yumei Y; Liu, Hongmei H; Shang, Heli H; Xu, Yuedong Y; Wu, Tong T; Liu, Wei W; Huang, Alan A; Dang, Qi Q; Sun, Yuping Y
Publication Date: 2021-10-04

Variant appearance in text: 225: A90S
PubMed Link: 34606472
Variant Present in the following documents:
  • aging-13-203584-s003.xlsx, sheet 1
  • aging-13-203584-s003.xlsx, sheet 3
View BVdb publication page



Long noncoding RNA SNHG1 promotes TERT expression by sponging miR-18b-5p in breast cancer.

Cell & Bioscience
Kang, Yujuan Y; Wan, Lin L; Wang, Qin Q; Yin, Yanling Y; Liu, Jiena J; Liu, Lei L; Wu, Hao H; Zhang, Lei L; Zhang, Xin X; Xu, Shouping S; Pang, Da D
Publication Date: 2021-08-31

Variant appearance in text: 225: A90S
PubMed Link: 34465388
Variant Present in the following documents:
  • 13578_2021_675_MOESM4_ESM.pdf
View BVdb publication page



The mutational landscape of human olfactory G protein-coupled receptors.

Bmc Biology
Jimenez, Ramón Cierco RC; Casajuana-Martin, Nil N; García-Recio, Adrián A; Alcántara, Lidia L; Pardo, Leonardo L; Campillo, Mercedes M; Gonzalez, Angel A
Publication Date: 2021-02-05

Variant appearance in text: 225: 268G>T
PubMed Link: 33546694
Variant Present in the following documents:
  • 12915_2021_962_MOESM4_ESM.xlsx, sheet 1
View BVdb publication page



NOTCH target gene HES5 mediates oncogenic and tumor suppressive functions in hepatocarcinogenesis.

Oncogene
Luiken, Sarah S; Fraas, Angelika A; Bieg, Matthias M; Sugiyanto, Raisatun R; Goeppert, Benjamin B; Singer, Stephan S; Ploeger, Carolin C; Warsow, Gregor G; Marquardt, Jens U JU; Sticht, Carsten C; De La Torre, Carolina C; Pusch, Stefan S; Mehrabi, Arianeb A; Gretz, Norbert N; Schlesner, Matthias M; Eils, Roland R; Schirmacher, Peter P; Longerich, Thomas T; Roessler, Stephanie S
Publication Date: 2020-04

Variant appearance in text: 225: 268G>T
PubMed Link: 32055024
Variant Present in the following documents:
  • 41388_2020_1198_MOESM2_ESM.xlsx, sheet 1
View BVdb publication page



A large peptidome dataset improves HLA class I epitope prediction across most of the human population.

Nature Biotechnology
Sarkizova, Siranush S; Klaeger, Susan S; Le, Phuong M PM; Li, Letitia W LW; Oliveira, Giacomo G; Keshishian, Hasmik H; Hartigan, Christina R CR; Zhang, Wandi W; Braun, David A DA; Ligon, Keith L KL; Bachireddy, Pavan P; Zervantonakis, Ioannis K IK; Rosenbluth, Jennifer M JM; Ouspenskaia, Tamara T; Law, Travis T; Justesen, Sune S; Stevens, Jonathan J; Lane, William J WJ; Eisenhaure, Thomas T; Lan Zhang, Guang G; Clauser, Karl R KR; Hacohen, Nir N; Carr, Steven A SA; Wu, Catherine J CJ; Keskin, Derin B DB
Publication Date: 2020-02

Variant appearance in text: 225: A90S
PubMed Link: 31844290
Variant Present in the following documents:
  • NIHMS1541512-supplement-Sup_Data1.xlsx, sheet 23
  • NIHMS1541512-supplement-Sup_Data1.xlsx, sheet 27
View BVdb publication page



An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics.

Cell
Liu, Jianfang J; Lichtenberg, Tara T; Hoadley, Katherine A KA; Poisson, Laila M LM; Lazar, Alexander J AJ; Cherniack, Andrew D AD; Kovatich, Albert J AJ; Benz, Christopher C CC; Levine, Douglas A DA; Lee, Adrian V AV; Omberg, Larsson L; Wolf, Denise M DM; Shriver, Craig D CD; Thorsson, Vesteinn V; , ; Hu, Hai H
Publication Date: 2018-04-05

Variant appearance in text: 225: A90S
PubMed Link: 29625055
Variant Present in the following documents:
  • NIHMS978596-supplement-1.xlsx, sheet 1
  • NIHMS978596-supplement-1.xlsx, sheet 3
View BVdb publication page



Mutation Clusters from Cancer Exome.

Genes
Kakushadze, Zura Z; Yu, Willie W
Publication Date: 2017-08-15

Variant appearance in text: 225: A90S
PubMed Link: 28809811
Variant Present in the following documents:
  • Main text
  • genes-08-00201.pdf
View BVdb publication page



Variant discovery in the sheep milk transcriptome using RNA sequencing.

Bmc Genomics
Suárez-Vega, Aroa A; Gutiérrez-Gil, Beatriz B; Klopp, Christophe C; Tosser-Klopp, Gwenola G; Arranz, Juan José JJ
Publication Date: 2017-02-15

Variant appearance in text: 225: 268G>T
PubMed Link: 28202015
Variant Present in the following documents:
  • 12864_2017_3581_MOESM1_ESM.xlsx, sheet 1
View BVdb publication page