Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery.
Nature Communications
Havugimana, Pierre C PC; Goel, Raghuveera Kumar RK; Phanse, Sadhna S; Youssef, Ahmed A; Padhorny, Dzmitry D; Kotelnikov, Sergei S; Kozakov, Dima D; Emili, Andrew A
A SARS-CoV-2 Delta variant containing mutation in the probe binding region used for RT-qPCR test in Japan exhibited atypical PCR amplification and might induce false negative result.
Journal Of Infection And Chemotherapy : Official Journal Of The Japan Society Of Chemotherapy
Characterization of the SARS-CoV-2 genomes in Egypt in first and second waves of infection.
Scientific Reports
Zekri, Abdel-Rahman N AN; Bahnasy, Abeer A AA; Hafez, Mohamed M MM; Hassan, Zeinab K ZK; Ahmed, Ola S OS; Soliman, Hany K HK; El-Sisi, Enas R ER; Dine, Mona H Salah El MHSE; Solimane, May S MS; Latife, Lamyaa S Abdel LSA; Seadawy, Mohamed G MG; Elsafty, Ahmed S AS; Abouelhoda, Mohamed M
Significance of CD8+ T cell infiltration-related biomarkers and the corresponding prediction model for the prognosis of kidney renal clear cell carcinoma.
Aging
Tian, Yuan Y; Wei, Yumei Y; Liu, Hongmei H; Shang, Heli H; Xu, Yuedong Y; Wu, Tong T; Liu, Wei W; Huang, Alan A; Dang, Qi Q; Sun, Yuping Y
NOTCH target gene HES5 mediates oncogenic and tumor suppressive functions in hepatocarcinogenesis.
Oncogene
Luiken, Sarah S; Fraas, Angelika A; Bieg, Matthias M; Sugiyanto, Raisatun R; Goeppert, Benjamin B; Singer, Stephan S; Ploeger, Carolin C; Warsow, Gregor G; Marquardt, Jens U JU; Sticht, Carsten C; De La Torre, Carolina C; Pusch, Stefan S; Mehrabi, Arianeb A; Gretz, Norbert N; Schlesner, Matthias M; Eils, Roland R; Schirmacher, Peter P; Longerich, Thomas T; Roessler, Stephanie S
A large peptidome dataset improves HLA class I epitope prediction across most of the human population.
Nature Biotechnology
Sarkizova, Siranush S; Klaeger, Susan S; Le, Phuong M PM; Li, Letitia W LW; Oliveira, Giacomo G; Keshishian, Hasmik H; Hartigan, Christina R CR; Zhang, Wandi W; Braun, David A DA; Ligon, Keith L KL; Bachireddy, Pavan P; Zervantonakis, Ioannis K IK; Rosenbluth, Jennifer M JM; Ouspenskaia, Tamara T; Law, Travis T; Justesen, Sune S; Stevens, Jonathan J; Lane, William J WJ; Eisenhaure, Thomas T; Lan Zhang, Guang G; Clauser, Karl R KR; Hacohen, Nir N; Carr, Steven A SA; Wu, Catherine J CJ; Keskin, Derin B DB
An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics.
Cell
Liu, Jianfang J; Lichtenberg, Tara T; Hoadley, Katherine A KA; Poisson, Laila M LM; Lazar, Alexander J AJ; Cherniack, Andrew D AD; Kovatich, Albert J AJ; Benz, Christopher C CC; Levine, Douglas A DA; Lee, Adrian V AV; Omberg, Larsson L; Wolf, Denise M DM; Shriver, Craig D CD; Thorsson, Vesteinn V; , ; Hu, Hai H