Publications:

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A linear B-cell epitope close to the furin cleavage site within the S1 domain of SARS-CoV-2 Spike protein discriminates the humoral immune response of nucleic acid- and protein-based vaccine cohorts.

Frontiers In Immunology

Lorenz, Peter P; Steinbeck, Felix F; Mai, Franz F; Reisinger, Emil C EC; Müller-Hilke, Brigitte B

Publication Date: 2023

Variant appearance in text: 225: F490S

PubMed Link: 37228598

Variant Present in the following documents:

• Table_1.xlsx, sheet 1

View BVdb publication page

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Fortuitous somatic mutations during antibody evolution endow broad neutralization against SARS-CoV-2 Omicron variants.

Cell Reports

Wu, Jianbo J; Chen, Zhenguo Z; Gao, Yidan Y; Wang, Zegen Z; Wang, Jiarong J; Chiang, Bing-Yu BY; Zhou, Yunjiao Y; Han, Yuru Y; Zhan, Wuqiang W; Xie, Minxiang M; Jiang, Weiyu W; Zhang, Xiang X; Hao, Aihua A; Xia, Anqi A; He, Jiaying J; Xue, Song S; Mayer, Christian T CT; Wu, Fan F; Wang, Bin B; Zhang, Lunan L; Sun, Lei L; Wang, Qiao Q

Publication Date: 2023-05-03

Variant appearance in text: 225: F490S

PubMed Link: 37178120

Variant Present in the following documents:

• main.pdf

View BVdb publication page

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An updated atlas of antibody evasion by SARS-CoV-2 Omicron sub-variants including BQ.1.1 and XBB.

Cell Reports. Medicine

He, Qingwen Q; Wu, Lili L; Xu, Zepeng Z; Wang, Xiaoyun X; Xie, Yufeng Y; Chai, Yan Y; Zheng, Anqi A; Zhou, Jianjie J; Qiao, Shitong S; Huang, Min M; Shang, Guijun G; Zhao, Xin X; Feng, Youjun Y; Qi, Jianxun J; Gao, George Fu GF; Wang, Qihui Q

Publication Date: 2023-03-21

Variant appearance in text: 225: F490S

PubMed Link: 37019110

Variant Present in the following documents:

• main.pdf

View BVdb publication page

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Covid-19: virology, variants, and vaccines.

Bmj Medicine

Young, Megan M; Crook, Harry H; Scott, Janet J; Edison, Paul P

Publication Date: 2022

Variant appearance in text: 225: F490S

PubMed Link: 36936563

Variant Present in the following documents:

• bmjmed-2021-000040.draft_revisions.pdf

View BVdb publication page

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Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infection.

Cell Reports. Medicine

Chaguza, Chrispin C; Hahn, Anne M AM; Petrone, Mary E ME; Zhou, Shuntai S; Ferguson, David D; Breban, Mallery I MI; Pham, Kien K; Peña-Hernández, Mario A MA; Castaldi, Christopher C; Hill, Verity V; , ; Schulz, Wade W; Swanstrom, Ronald I RI; Roberts, Scott C SC; Grubaugh, Nathan D ND

Publication Date: 2023-01-27

Variant appearance in text: 225: F490S

PubMed Link: 36791724

Variant Present in the following documents:

• main.pdf
• mmc3.pdf

View BVdb publication page

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Fortuitous Somatic Mutations during Antibody Evolution Endow Broad Neutralization against SARS-CoV-2 Omicron Variants.

Biorxiv : The Preprint Server For Biology

Wu, Jianbo J; Chen, Zhenguo Z; Gao, Yidan Y; Wang, Zegen Z; Wang, Jiarong J; Chiang, Bing-Yu BY; Zhou, Yunjiao Y; Han, Yuru Y; Zhan, Wuqiang W; Xie, Minxiang M; Jiang, Weiyu W; Zhang, Xiang X; Hao, Aihua A; Xia, Anqi A; He, Jiaying J; Xue, Song S; Mayer, Christian T CT; Wu, Fan F; Wang, Bin B; Zhang, Lunan L; Sun, Lei L; Wang, Qiao Q

Publication Date: 2022-12-13

Variant appearance in text: 225: F490S

PubMed Link: 36561175

Variant Present in the following documents:

• nihpp-2022.12.12.520172v1.pdf

View BVdb publication page

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Rapid SARS-CoV-2 Variants Enzymatic Detection (SAVED) by CRISPR-Cas12a.

Microbiology Spectrum

Yang, Jun J; Barua, Nilakshi N; Rahman, Md Nannur MN; Li, Carmen C; Lo, Norman N; Yeong, Kai Yan KY; Tsang, Tsz Fung TF; Yang, Xiao X; Cheung, Yuk-Yam YY; Tsang, Alan K L AKL; Chan, Rickjason C W RCW; Leung, Eddie Chi-Man EC; Chan, Paul K S PKS; Ip, Margaret M

Publication Date: 2022-11-07

Variant appearance in text: 225: F490S

PubMed Link: 36342324

Variant Present in the following documents:

• spectrum.03260-22-s0001.pdf

View BVdb publication page

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SARS-CoV-2 Omicron boosting induces de novo B cell response in humans.

Biorxiv : The Preprint Server For Biology

Alsoussi, Wafaa B WB; Malladi, Sameer K SK; Zhou, Julian Q JQ; Liu, Zhuoming Z; Ying, Baoling B; Kim, Wooseob W; Schmitz, Aaron J AJ; Lei, Tingting T; Horvath, Stephen C SC; Sturtz, Alexandria J AJ; McIntire, Katherine M KM; Evavold, Birk B; Han, Fangjie F; Scheaffer, Suzanne M SM; Fox, Isabella F IF; Parra-Rodriguez, Luis L; Nachbagauer, Raffael R; Nestorova, Biliana B; Chalkias, Spyros S; Farnsworth, Christopher W CW; Klebert, Michael K MK; Pusic, Iskra I; Strnad, Benjamin S BS; Middleton, William D WD; Teefey, Sharlene A SA; Whelan, Sean P J SPJ; Diamond, Michael S MS; Paris, Robert R; O'Halloran, Jane A JA; Presti, Rachel M RM; Turner, Jackson S JS; Ellebedy, Ali H AH

Publication Date: 2022-09-22

Variant appearance in text: 225: F490S

PubMed Link: 36172127

Variant Present in the following documents:

• nihpp-2022.09.22.509040v1.pdf

View BVdb publication page

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Evolution of antibody immunity following Omicron BA.1 breakthrough infection.

Biorxiv : The Preprint Server For Biology

Kaku, Chengzi I CI; Starr, Tyler N TN; Zhou, Panpan P; Dugan, Haley L HL; Khalifé, Paul P; Song, Ge G; Champney, Elizabeth R ER; Mielcarz, Daniel W DW; Geoghegan, James C JC; Burton, Dennis R DR; Andrabi, Raiees R; Bloom, Jesse D JD; Walker, Laura M LM

Publication Date: 2022-09-22

Variant appearance in text: 225: F490S

PubMed Link: 36172124

Variant Present in the following documents:

• nihpp-2022.09.21.508922v1.pdf

View BVdb publication page

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Efficacy, safety, and immunogenicity of a booster regimen of Ad26.COV2.S vaccine against COVID-19 (ENSEMBLE2): results of a randomised, double-blind, placebo-controlled, phase 3 trial.

The Lancet. Infectious Diseases

Hardt, Karin K; Vandebosch, An A; Sadoff, Jerald J; Le Gars, Mathieu M; Truyers, Carla C; Lowson, David D; Van Dromme, Ilse I; Vingerhoets, Johan J; Kamphuis, Tobias T; Scheper, Gert G; Ruiz-Guiñazú, Javier J; Faust, Saul N SN; Spinner, Christoph D CD; Schuitemaker, Hanneke H; Van Hoof, Johan J; Douoguih, Macaya M; Struyf, Frank F; ,

Publication Date: 2022-12

Variant appearance in text: 225: F490S

PubMed Link: 36113538

Variant Present in the following documents:

• mmc1.pdf

View BVdb publication page

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Potent and broad neutralization of SARS-CoV-2 variants of concern (VOCs) including omicron sub-lineages BA.1 and BA.2 by biparatopic human VH domains.

Iscience

Chen, Chuan C; Saville, James W JW; Marti, Michelle M MM; Schäfer, Alexandra A; Cheng, Mary Hongying MH; Mannar, Dhiraj D; Zhu, Xing X; Berezuk, Alison M AM; Banerjee, Anupam A; Sobolewski, Michele D MD; Kim, Andrew A; Treat, Benjamin R BR; Da Silva Castanha, Priscila Mayrelle PM; Enick, Nathan N; McCormick, Kevin D KD; Liu, Xianglei X; Adams, Cynthia C; Hines, Margaret Grace MG; Sun, Zehua Z; Chen, Weizao W; Jacobs, Jana L JL; Barratt-Boyes, Simon M SM; Mellors, John W JW; Baric, Ralph S RS; Bahar, Ivet I; Dimitrov, Dimiter S DS; Subramaniam, Sriram S; Martinez, David R DR; Li, Wei W

Publication Date: 2022-08-19

Variant appearance in text: 225: F490S

PubMed Link: 35875685

Variant Present in the following documents:

• main.pdf

View BVdb publication page

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Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infection.

Medrxiv : The Preprint Server For Health Sciences

Chaguza, Chrispin C; Hahn, Anne M AM; Petrone, Mary E ME; Zhou, Shuntai S; Ferguson, David D; Breban, Mallery I MI; Pham, Kien K; Peña-Hernández, Mario A MA; Castaldi, Christopher C; Hill, Verity V; , ; Schulz, Wade W; Swanstrom, Ronald I RI; Roberts, Scott C SC; Grubaugh, Nathan D ND

Publication Date: 2022-07-02

Variant appearance in text: 225: F490S

PubMed Link: 35794895

Variant Present in the following documents:

• nihpp-2022.06.29.22276868v1.pdf

View BVdb publication page

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Integrative structural studies of the SARS-CoV-2 spike protein during the fusion process (2022).

Current Research In Structural Biology

Miner, Jacob C JC; Fenimore, Paul W PW; Fischer, William M WM; McMahon, Benjamin H BH; Sanbonmatsu, Karissa Y KY; Tung, Chang-Shung CS

Publication Date: 2022

Variant appearance in text: 225: F490S

PubMed Link: 35765663

Variant Present in the following documents:

• main.pdf

View BVdb publication page

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Mapping of SARS-CoV-2 spike protein evolution during first and second waves of COVID-19 infections in India.

Future Virology

Rajpal, Vijay Rani VR; Sharma, Shashi S; Kumar, Avinash A; Vaishnavi, Samantha S; Singh, Apekshita A; Sehgal, Deepmala D; Tiwari, Mughdha M; Goel, Shailendra S; Raina, Soom Nath SN

Publication Date: 2022-05

Variant appearance in text: 225: F490S

PubMed Link: 35747327

Variant Present in the following documents:

• fvl-2021-0267.pdf

View BVdb publication page

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Molecular aspects of Omicron, vaccine development, and recombinant strain XE: A review.

Journal Of Medical Virology

K, Akash A; Sharma, Avinash A; Kumar, Deepak D; Singh, Sachin K SK; Gupta, Gaurav G; Chellappan, Dinesh K DK; Dua, Kamal K; Nagraik, Rupak R

Publication Date: 2022-10

Variant appearance in text: 225: F490S

PubMed Link: 35705439

Variant Present in the following documents:

• JMV-9999-0.pdf

View BVdb publication page

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A Short Series of Case Reports of COVID-19 in Immunocompromised Patients.

Viruses

Mishra, Mitali M; Zahra, Aleena A; Chauhan, Lokendra V LV; Thakkar, Riddhi R; Ng, James J; Joshi, Shreyas S; Spitzer, Eric D ED; Marcos, Luis A LA; Lipkin, W Ian WI; Mishra, Nischay N

Publication Date: 2022-04-29

Variant appearance in text: 225: F490S

PubMed Link: 35632677

Variant Present in the following documents:

• viruses-14-00934.pdf

View BVdb publication page

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Development of antibody resistance in emerging mutant strains of SARS CoV-2: Impediment for COVID-19 vaccines.

Reviews In Medical Virology

Beeraka, Narasimha M NM; Sukocheva, Olga A OA; Lukina, Elena E; Liu, Junqi J; Fan, Ruitai R

Publication Date: 2022-09

Variant appearance in text: 225: F490S

PubMed Link: 35416390

Variant Present in the following documents:

• Main text

View BVdb publication page

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Mutational cascade of SARS-CoV-2 leading to evolution and emergence of omicron variant.

Virus Research

Bansal, Kanika K; Kumar, Sanjeet S

Publication Date: 2022-07-02

Variant appearance in text: 225: F490S

PubMed Link: 35367284

Variant Present in the following documents:

• mmc1.xlsx, sheet 1
• mmc1.xlsx, sheet 6

View BVdb publication page

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Evasion of vaccine-induced humoral immunity by emerging sub-variants of SARS-CoV-2.

Future Microbiology

Koyama, Takahiko T; Miyakawa, Kei K; Tokumasu, Reitaro R; S Jeremiah, Sundararaj S; Kudo, Michiharu M; Ryo, Akihide A

Publication Date: 2022-04

Variant appearance in text: 225: F490S

PubMed Link: 35350884

Variant Present in the following documents:

• fmb-2022-0025.pdf

View BVdb publication page

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Molecular variants of SARS-CoV-2: antigenic properties and current vaccine efficacy.

Medical Microbiology And Immunology

Rayati Damavandi, Amirmasoud A; Dowran, Razieh R; Al Sharif, Sarah S; Kashanchi, Fatah F; Jafari, Reza R

Publication Date: 2022-06

Variant appearance in text: 225: F490S

PubMed Link: 35235048

Variant Present in the following documents:

• Main text
• 430_2022_Article_729.pdf

View BVdb publication page

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Final Analysis of Efficacy and Safety of Single-Dose Ad26.COV2.S.

The New England Journal Of Medicine

Sadoff, Jerald J; Gray, Glenda G; Vandebosch, An A; Cárdenas, Vicky V; Shukarev, Georgi G; Grinsztejn, Beatriz B; Goepfert, Paul A PA; Truyers, Carla C; Van Dromme, Ilse I; Spiessens, Bart B; Vingerhoets, Johan J; Custers, Jerome J; Scheper, Gert G; Robb, Merlin L ML; Treanor, John J; Ryser, Martin F MF; Barouch, Dan H DH; Swann, Edith E; Marovich, Mary A MA; Neuzil, Kathleen M KM; Corey, Lawrence L; Stoddard, Jeffrey J; Hardt, Karin K; Ruiz-Guiñazú, Javier J; Le Gars, Mathieu M; Schuitemaker, Hanneke H; Van Hoof, Johan J; Struyf, Frank F; Douoguih, Macaya M; ,

Publication Date: 2022-03-03

Variant appearance in text: 225: F490S

PubMed Link: 35139271

Variant Present in the following documents:

• NEJMoa2117608_protocol.pdf

View BVdb publication page

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The Variation of SARS-CoV-2 and Advanced Research on Current Vaccines.

Frontiers In Medicine

Jiang, Yao Y; Wu, Qian Q; Song, Peipei P; You, Chongge C

Publication Date: 2021

Variant appearance in text: 225: F490S

PubMed Link: 35118097

Variant Present in the following documents:

• Main text
• fmed-08-806641.pdf

View BVdb publication page

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SARS-CoV-2 evolved during advanced HIV disease immunosuppression has Beta-like escape of vaccine and Delta infection elicited immunity.

Medrxiv : The Preprint Server For Health Sciences

Cele, Sandile S; Karim, Farina F; Lustig, Gila G; San, James Emmanuel JE; Hermanus, Tandile T; Tegally, Houriiyah H; Snyman, Jumari J; Moyo-Gwete, Thandeka T; Wilkinson, Eduan E; Bernstein, Mallory M; Khan, Khadija K; Hwa, Shi-Hsia SH; Tilles, Sasha W SW; Singh, Lavanya L; Giandhari, Jennifer J; Mthabela, Ntombifuthi N; Mazibuko, Matilda M; Ganga, Yashica Y; Gosnell, Bernadett I BI; Karim, Salim Abdool SA; Hanekom, Willem W; Van Voorhis, Wesley C WC; Ndungâ U, Thumbi T; , ; Lessells, Richard J RJ; Moore, Penny L PL; Moosa, Mahomed-Yunus S MS; de Oliveira, Tulio T; Sigal, Alex A

Publication Date: 2021-12-07

Variant appearance in text: 225: F490S

PubMed Link: 34909798

Variant Present in the following documents:

• nihpp-2021.09.14.21263564v2.pdf

View BVdb publication page

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SARS-CoV-2 evolved during advanced HIV disease immunosuppression has Beta-like escape of vaccine and Delta infection elicited immunity.

Medrxiv : The Preprint Server For Health Sciences

Cele, Sandile S; Karim, Farina F; Lustig, Gila G; San, James Emmanuel JE; Hermanus, Tandile T; Tegally, Houriiyah H; Snyman, Jumari J; Moyo-Gwete, Thandeka T; Wilkinson, Eduan E; Bernstein, Mallory M; Khan, Khadija K; Hwa, Shi-Hsia SH; Tilles, Sasha W SW; Singh, Lavanya L; Giandhari, Jennifer J; Mthabela, Ntombifuthi N; Mazibuko, Matilda M; Ganga, Yashica Y; Gosnell, Bernadett I BI; Karim, Salim Abdool SA; Hanekom, Willem W; Van Voorhis, Wesley C WC; Ndung'u, Thumbi T; , ; Lessells, Richard J RJ; Moore, Penny L PL; Moosa, Mahomed-Yunus S MS; de Oliveira, Tulio T; Sigal, Alex A

Publication Date: 2021-12-07

Variant appearance in text: 225: F490S

PubMed Link: 34909798

Variant Present in the following documents:

• nihpp-2021.09.14.21263564v2.pdf

View BVdb publication page

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HDAC2 Facilitates Pancreatic Cancer Metastasis.

Cancer Research

Krauß, Lukas L; Urban, Bettina C BC; Hastreiter, Sieglinde S; Schneider, Carolin C; Wenzel, Patrick P; Hassan, Zonera Z; Wirth, Matthias M; Lankes, Katharina K; Terrasi, Andrea A; Klement, Christine C; Cernilogar, Filippo M FM; Öllinger, Rupert R; de Andrade Krätzig, Niklas N; Engleitner, Thomas T; Schmid, Roland M RM; Steiger, Katja K; Rad, Roland R; Krämer, Oliver H OH; Reichert, Maximilian M; Schotta, Gunnar G; Saur, Dieter D; Schneider, Günter G

Publication Date: 2022-02-15

Variant appearance in text: 225: 1469T>C

PubMed Link: 34903606

Variant Present in the following documents:

• can-20-3209_supplementary_table_3_suppst3.xlsx, sheet 2

View BVdb publication page

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Mutations of SARS-CoV-2 spike protein: Implications on immune evasion and vaccine-induced immunity.

Seminars In Immunology

Mengist, Hylemariam Mihiretie HM; Kombe Kombe, Arnaud John AJ; Mekonnen, Daniel D; Abebaw, Abtie A; Getachew, Melese M; Jin, Tengchuan T

Publication Date: 2021-11-20

Variant appearance in text: 225: F490S

PubMed Link: 34836774

Variant Present in the following documents:

• Main text
• main.pdf

View BVdb publication page

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Mutations of SARS-CoV-2 spike protein: Implications on immune evasion and vaccine-induced immunity.

Seminars In Immunology

Mengist, Hylemariam Mihiretie HM; Kombe Kombe, Arnaud John AJ; Mekonnen, Daniel D; Abebaw, Abtie A; Getachew, Melese M; Jin, Tengchuan T

Publication Date: 2021-06

Variant appearance in text: 225: F490S

PubMed Link: 34836774

Variant Present in the following documents:

• Main text
• main.pdf

View BVdb publication page

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Application of omics technology to combat the COVID-19 pandemic.

Medcomm

Yang, Jingjing J; Yan, Yunzheng Y; Zhong, Wu W

Publication Date: 2021-09

Variant appearance in text: 225: F490S

PubMed Link: 34766152

Variant Present in the following documents:

• Main text

View BVdb publication page

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Comparing COVID-19 vaccines for their characteristics, efficacy and effectiveness against SARS-CoV-2 and variants of concern: a narrative review.

Clinical Microbiology And Infection : The Official Publication Of The European Society Of Clinical Microbiology And Infectious Diseases

Fiolet, Thibault T; Kherabi, Yousra Y; MacDonald, Conor-James CJ; Ghosn, Jade J; Peiffer-Smadja, Nathan N

Publication Date: 2021-10-27

Variant appearance in text: 225: F490S

PubMed Link: 34715347

Variant Present in the following documents:

• Main text
• main.pdf

View BVdb publication page

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Comparing COVID-19 vaccines for their characteristics, efficacy and effectiveness against SARS-CoV-2 and variants of concern: a narrative review.

Clinical Microbiology And Infection : The Official Publication Of The European Society Of Clinical Microbiology And Infectious Diseases

Fiolet, Thibault T; Kherabi, Yousra Y; MacDonald, Conor-James CJ; Ghosn, Jade J; Peiffer-Smadja, Nathan N

Publication Date: 2022-02

Variant appearance in text: 225: F490S

PubMed Link: 34715347

Variant Present in the following documents:

• Main text
• main.pdf

View BVdb publication page

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COVID-19: The Disease, the Immunological Challenges, the Treatment with Pharmaceuticals and Low-Dose Ionizing Radiation.

Cells

Yu, Jihang J; Azzam, Edouard I EI; Jadhav, Ashok B AB; Wang, Yi Y

Publication Date: 2021-08-27

Variant appearance in text: 225: F490S

PubMed Link: 34571861

Variant Present in the following documents:

• Main text

View BVdb publication page

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Review of the mechanisms of SARS-CoV-2 evolution and transmission.

Arxiv

Chen, Jiahui J; Wang, Rui R; Wei, Guo-Wei GW

Publication Date: 2021-09-15

Variant appearance in text: 225: F490S

PubMed Link: 34545334

Variant Present in the following documents:

• Main text
• nihpp-2109.08148v1.pdf

View BVdb publication page

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The biological and clinical significance of emerging SARS-CoV-2 variants.

Nature Reviews. Genetics

Tao, Kaiming K; Tzou, Philip L PL; Nouhin, Janin J; Gupta, Ravindra K RK; de Oliveira, Tulio T; Kosakovsky Pond, Sergei L SL; Fera, Daniela D; Shafer, Robert W RW

Publication Date: 2021-12

Variant appearance in text: 225: F490S

PubMed Link: 34535792

Variant Present in the following documents:

• Main text

View BVdb publication page

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SARS-CoV-2, Zika viruses and mycoplasma: Structure, pathogenesis and some treatment options in these emerging viral and bacterial infectious diseases.

Biochimica Et Biophysica Acta. Molecular Basis Of Disease

Ferreira, Gonzalo G; Santander, Axel A; Savio, Florencia F; Guirado, Mariana M; Sobrevia, Luis L; Nicolson, Garth L GL

Publication Date: 2021-12-01

Variant appearance in text: 225: F490S

PubMed Link: 34481867

Variant Present in the following documents:

• Main text

View BVdb publication page

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Evolutionary trajectory of SARS-CoV-2 and emerging variants.

Virology Journal

Singh, Jalen J; Pandit, Pranav P; McArthur, Andrew G AG; Banerjee, Arinjay A; Mossman, Karen K

Publication Date: 2021-08-13

Variant appearance in text: 225: F490S

PubMed Link: 34389034

Variant Present in the following documents:

• Main text

View BVdb publication page

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Prediction and mitigation of mutation threats to COVID-19 vaccines and antibody therapies.

Chemical Science

Chen, Jiahui J; Gao, Kaifu K; Wang, Rui R; Wei, Guo-Wei GW

Publication Date: 2021-04-13

Variant appearance in text: 225: F490S

PubMed Link: 34123321

Variant Present in the following documents:

• Main text
• SC-012-D1SC01203G.pdf

View BVdb publication page

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SARS-CoV-2 B.1.1.7 sensitivity to mRNA vaccine-elicited, convalescent and monoclonal antibodies.

Medrxiv : The Preprint Server For Health Sciences

Collier, Dami A DA; De Marco, Anna A; Ferreira, Isabella A T M IATM; Meng, Bo B; Datir, Rawlings R; Walls, Alexandra C AC; Kemp S, Steven A SA; Bassi, Jessica J; Pinto, Dora D; Fregni, Chiara Silacci CS; Bianchi, Siro S; Tortorici, M Alejandra MA; Bowen, John J; Culap, Katja K; Jaconi, Stefano S; Cameroni, Elisabetta E; Snell, Gyorgy G; Pizzuto, Matteo S MS; Pellanda, Alessandra Franzetti AF; Garzoni, Christian C; Riva, Agostino A; , ; Elmer, Anne A; Kingston, Nathalie N; Graves, Barbara B; McCoy, Laura E LE; Smith, Kenneth Gc KG; Bradley, John R JR; Temperton, Nigel N; Ceron-Gutierrez L, Lourdes L; Barcenas-Morales, Gabriela G; , ; Harvey, William W; Virgin, Herbert W HW; Lanzavecchia, Antonio A; Piccoli, Luca L; Doffinger, Rainer R; Wills, Mark M; Veesler, David D; Corti, Davide D; Gupta, Ravindra K RK

Publication Date: 2021-02-15

Variant appearance in text: 225: F490S

PubMed Link: 33619509

Variant Present in the following documents:

• nihpp-2021.01.19.21249840.pdf

View BVdb publication page

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Comprehensive annotations of the mutational spectra of SARS-CoV-2 spike protein: a fast and accurate pipeline.

Transboundary And Emerging Diseases

Rahman, Mohammad Shaminur MS; Islam, Mohammad Rafiul MR; Hoque, Mohammad Nazmul MN; Alam, Abu Sayed Mohammad Rubayet Ul ASMRU; Akther, Masuda M; Puspo, Joynob Akter JA; Akter, Salma S; Anwar, Azraf A; Sultana, Munawar M; Hossain, Mohammad Anwar MA

Publication Date: 2021-05

Variant appearance in text: 225: F490S

PubMed Link: 32954666

Variant Present in the following documents:

• TBED-9999-na-s003.xlsx, sheet 1

View BVdb publication page

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Targeting DDR2 enhances tumor response to anti-PD-1 immunotherapy.

Science Advances

Tu, Megan M MM; Lee, Francis Y F FYF; Jones, Robert T RT; Kimball, Abigail K AK; Saravia, Elizabeth E; Graziano, Robert F RF; Coleman, Brianne B; Menard, Krista K; Yan, Jun J; Michaud, Erin E; Chang, Han H; Abdel-Hafiz, Hany A HA; Rozhok, Andrii I AI; Duex, Jason E JE; Agarwal, Neeraj N; Chauca-Diaz, Ana A; Johnson, Linda K LK; Ng, Terry L TL; Cambier, John C JC; Clambey, Eric T ET; Costello, James C JC; Korman, Alan J AJ; Theodorescu, Dan D

Publication Date: 2019-02

Variant appearance in text: 225: 1469T>C

PubMed Link: 30801016

Variant Present in the following documents:

• aav2437_Table_S1.xlsx, sheet 1

View BVdb publication page

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Integrated genomic and metabolomic profiling of ISC1, an emerging Leishmania donovani population in the Indian subcontinent.

Infection, Genetics And Evolution : Journal Of Molecular Epidemiology And Evolutionary Genetics In Infectious Diseases

Cuypers, Bart B; Berg, Maya M; Imamura, Hideo H; Dumetz, Franck F; De Muylder, Géraldine G; Domagalska, Malgorzata A MA; Rijal, Suman S; Bhattarai, Narayan Raj NR; Maes, Ilse I; Sanders, Mandy M; Cotton, James A JA; Meysman, Pieter P; Laukens, Kris K; Dujardin, Jean-Claude JC

Publication Date: 2018-08

Variant appearance in text: 225: 1469T>C

PubMed Link: 29679745

Variant Present in the following documents:

• mmc3.xlsx, sheet 1

View BVdb publication page

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Genome and phylogenetic analyses of Trypanosoma evansi reveal extensive similarity to T. brucei and multiple independent origins for dyskinetoplasty.

Plos Neglected Tropical Diseases

Carnes, Jason J; Anupama, Atashi A; Balmer, Oliver O; Jackson, Andrew A; Lewis, Michael M; Brown, Rob R; Cestari, Igor I; Desquesnes, Marc M; Gendrin, Claire C; Hertz-Fowler, Christiane C; Imamura, Hideo H; Ivens, Alasdair A; Kořený, Luděk L; Lai, De-Hua DH; MacLeod, Annette A; McDermott, Suzanne M SM; Merritt, Chris C; Monnerat, Severine S; Moon, Wonjong W; Myler, Peter P; Phan, Isabelle I; Ramasamy, Gowthaman G; Sivam, Dhileep D; Lun, Zhao-Rong ZR; Lukeš, Julius J; Stuart, Ken K; Schnaufer, Achim A

Publication Date: 2015-01

Variant appearance in text: 225: Phe490Ser

PubMed Link: 25568942

Variant Present in the following documents:

• pntd.0003404.s019.xlsx, sheet 1

View BVdb publication page

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