SLC45A2 c.889-4350G>T

Variant ID: 5-33958959-C-A

NM_016180.3(SLC45A2):c.889-4350G>T

This variant was identified in 56 publications

View GRCh38 version.




Publications:


Accuracy of Eye and Hair Color Prediction in Mexican Mestizos from Monterrey City Based on ForenSeqTM DNA Signature Prep.

Genes
Aguilar-Velázquez, José Alonso JA; Llamas-de-Dios, Blanca Jeannete BJ; Córdova-Mercado, Miranda Fabiola MF; Coronado-Ávila, Carolina Elena CE; Salas-Salas, Orlando O; López-Quintero, Andrés A; Ramos-González, Benito B; Rangel-Villalobos, Héctor H
Publication Date: 2023-05-22

Variant appearance in text: rs28777
PubMed Link: 37239480
Variant Present in the following documents:
  • genes-14-01120.pdf
View BVdb publication page



Human profiling from STR and SNP analysis of tropical bed bug, Cimex hemipterus, for forensic science.

Scientific Reports
Lim, Li L; Ab Majid, Abdul Hafiz AH
Publication Date: 2023-01-27

Variant appearance in text: rs28777
PubMed Link: 36707655
Variant Present in the following documents:
  • Main text
  • 41598_2023_Article_28774.pdf
View BVdb publication page



Establishment and characterization of a new mantle cell lymphoma cell line with a NOTCH2 mutation, Arbo.

Ejhaem
Safa, Firas F; Rasmussen, Terri T; Lobelle-Rich, Patricia P; Collier, Stephanie S; Milligan, Nicholas N; Schmeig, John J; Schmid, Janet J; Wiewiorowski, Carol C; Totaro, Denise D; Brown, Theresa C TC; Satyavarapu, Ishwarya I; Badoo, Melody M; Ungerleider, Nathan N; Flemington, Erik K EK; Safah, Hana H; Saba, Nakhle S NS
Publication Date: 2022-11

Variant appearance in text: rs28777
PubMed Link: 36467812
Variant Present in the following documents:
  • JHA2-3-1326-s001.xlsx, sheet 1
View BVdb publication page



Case Report: Primary Leptomeningeal Medulloblastoma in a Child: Clinical Case Report and Literature Review.

Frontiers In Pediatrics
Morgacheva, Daria D; Daks, Alexandra A; Smirnova, Anna A; Kim, Aleksandr A; Ryzhkova, Daria D; Mitrofanova, Lubov L; Staliarova, Alena A; Omelina, Evgeniya E; Pindyurin, Alexey A; Fedorova, Olga O; Shuvalov, Oleg O; Petukhov, Alexey A; Dinikina, Yulia Y
Publication Date: 2022

Variant appearance in text: SLC45A2: 889-4350G>T; rs28777
PubMed Link: 35899134
Variant Present in the following documents:
  • Table_1.xlsx, sheet 1
View BVdb publication page



Unveiling forensically relevant biogeographic, phenotype and Y-chromosome SNP variation in Pakistani ethnic groups using a customized hybridisation enrichment forensic intelligence panel.

Plos One
Rauf, Sobiah S; Austin, Jeremy J JJ; Higgins, Denice D; Khan, Muhammad Ramzan MR
Publication Date: 2022

Variant appearance in text: rs28777
PubMed Link: 35176104
Variant Present in the following documents:
  • Main text
  • pone.0264125.pdf
View BVdb publication page



Pushing the Boundaries: Forensic DNA Phenotyping Challenged by Single-Cell Sequencing.

Genes
Diepenbroek, Marta M; Bayer, Birgit B; Anslinger, Katja K
Publication Date: 2021-08-30

Variant appearance in text: rs28777
PubMed Link: 34573344
Variant Present in the following documents:
  • genes-12-01362.pdf
View BVdb publication page



Whole-genome association analyses of sleep-disordered breathing phenotypes in the NHLBI TOPMed program.

Genome Medicine
Cade, Brian E BE; Lee, Jiwon J; Sofer, Tamar T; Wang, Heming H; Zhang, Man M; Chen, Han H; Gharib, Sina A SA; Gottlieb, Daniel J DJ; Guo, Xiuqing X; Lane, Jacqueline M JM; Liang, Jingjing J; Lin, Xihong X; Mei, Hao H; Patel, Sanjay R SR; Purcell, Shaun M SM; Saxena, Richa R; Shah, Neomi A NA; Evans, Daniel S DS; Hanis, Craig L CL; Hillman, David R DR; Mukherjee, Sutapa S; Palmer, Lyle J LJ; Stone, Katie L KL; Tranah, Gregory J GJ; , ; Abecasis, Gonçalo R GR; Boerwinkle, Eric A EA; Correa, Adolfo A; Cupples, L Adrienne LA; Kaplan, Robert C RC; Nickerson, Deborah A DA; North, Kari E KE; Psaty, Bruce M BM; Rotter, Jerome I JI; Rich, Stephen S SS; Tracy, Russell P RP; Vasan, Ramachandran S RS; Wilson, James G JG; Zhu, Xiaofeng X; Redline, Susan S; ,
Publication Date: 2021-08-26

Variant appearance in text: rs28777
PubMed Link: 34446064
Variant Present in the following documents:
  • Main text
  • 13073_2021_Article_917.pdf
View BVdb publication page



Association of pigmentation related-genes polymorphisms and geographic environmental variables in the Chinese population.

Hereditas
Wang, Yuxin Y
Publication Date: 2021-07-08

Variant appearance in text: rs28777
PubMed Link: 34238381
Variant Present in the following documents:
  • Main text
  • 41065_2021_Article_189.pdf
View BVdb publication page



Evaluation of OpenArray™ as a Genotyping Method for Forensic DNA Phenotyping and Human Identification.

Genes
Ragazzo, Michele M; Puleri, Giulio G; Errichiello, Valeria V; Manzo, Laura L; Luzzi, Laura L; Potenza, Saverio S; Strafella, Claudia C; Peconi, Cristina C; Nicastro, Fabio F; Caputo, Valerio V; Giardina, Emiliano E
Publication Date: 2021-02-03

Variant appearance in text: rs28777
PubMed Link: 33546406
Variant Present in the following documents:
  • Main text
  • genes-12-00221.pdf
View BVdb publication page



Dissecting dynamics and differences of selective pressures in the evolution of human pigmentation.

Biology Open
Huang, Xin X; Wang, Sijia S; Jin, Li L; He, Yungang Y
Publication Date: 2021-02-09

Variant appearance in text: rs28777
PubMed Link: 33495209
Variant Present in the following documents:
  • Main text
  • biolopen-10-056523.pdf
View BVdb publication page



Genetic ancestry, skin pigmentation, and the risk of cutaneous squamous cell carcinoma in Hispanic/Latino and non-Hispanic white populations.

Communications Biology
Jorgenson, Eric E; Choquet, Hélène H; Yin, Jie J; Hoffmann, Thomas J TJ; Banda, Yambazi Y; Kvale, Mark N MN; Risch, Neil N; Schaefer, Catherine C; Asgari, Maryam M MM
Publication Date: 2020-12-14

Variant appearance in text: rs28777
PubMed Link: 33318654
Variant Present in the following documents:
  • Main text
  • 42003_2020_Article_1461.pdf
View BVdb publication page



Investigating DNA methylation as a potential mediator between pigmentation genes, pigmentary traits and skin cancer.

Pigment Cell & Melanoma Research
Bonilla, Carolina C; Bertoni, Bernardo B; Min, Josine L JL; Hemani, Gibran G; , ; Elliott, Hannah R HR
Publication Date: 2021-09

Variant appearance in text: rs28777
PubMed Link: 33248005
Variant Present in the following documents:
  • Main text
  • PCMR-34-892.pdf
View BVdb publication page



Exploring the possibility of predicting human head hair greying from DNA using whole-exome and targeted NGS data.

Bmc Genomics
Pośpiech, Ewelina E; Kukla-Bartoszek, Magdalena M; Karłowska-Pik, Joanna J; Zieliński, Piotr P; Woźniak, Anna A; Boroń, Michał M; Dąbrowski, Michał M; Zubańska, Magdalena M; Jarosz, Agata A; Grzybowski, Tomasz T; Płoski, Rafał R; Spólnicka, Magdalena M; Branicki, Wojciech W
Publication Date: 2020-08-05

Variant appearance in text: rs28777
PubMed Link: 32758128
Variant Present in the following documents:
  • 12864_2020_6926_MOESM1_ESM.pdf
View BVdb publication page



Corded Ware cultural complexity uncovered using genomic and isotopic analysis from south-eastern Poland.

Scientific Reports
Linderholm, Anna A; Kılınç, Gülşah Merve GM; Szczepanek, Anita A; Włodarczak, Piotr P; Jarosz, Paweł P; Belka, Zdzislaw Z; Dopieralska, Jolanta J; Werens, Karolina K; Górski, Jacek J; Mazurek, Mirosław M; Hozer, Monika M; Rybicka, Małgorzata M; Ostrowski, Mikołaj M; Bagińska, Jolanta J; Koman, Wiesław W; Rodríguez-Varela, Ricardo R; Storå, Jan J; Götherström, Anders A; Krzewińska, Maja M
Publication Date: 2020-04-14

Variant appearance in text: rs28777
PubMed Link: 32303690
Variant Present in the following documents:
  • 41598_2020_63138_MOESM2_ESM.xlsx, sheet 12
  • 41598_2020_63138_MOESM2_ESM.xlsx, sheet 11
View BVdb publication page



Twenty-seven continental ancestry-informative SNP analysis of bone remains to resolve a forensic case.

Forensic Sciences Research
Sun, Qifan Q; Jiang, Li L; Zhang, Guangfeng G; Liu, Jing J; Zhao, Lei L; Zhao, Wenting W; Li, Caixia C
Publication Date: 2019

Variant appearance in text: rs28777
PubMed Link: 32002497
Variant Present in the following documents:
  • Main text
  • TFSR_4_1306431.pdf
View BVdb publication page



"The dead shall be raised": Multidisciplinary analysis of human skeletons reveals complexity in 19th century immigrant socioeconomic history and identity in New Haven, Connecticut.

Plos One
Aronsen, Gary P GP; Fehren-Schmitz, Lars L; Krigbaum, John J; Kamenov, George D GD; Conlogue, Gerald J GJ; Warinner, Christina C; Ozga, Andrew T AT; Sankaranarayanan, Krithivasan K; Griego, Anthony A; DeLuca, Daniel W DW; Eckels, Howard T HT; Byczkiewicz, Romuald K RK; Grgurich, Tania T; Pelletier, Natalie A NA; Brownlee, Sarah A SA; Marichal, Ana A; Williamson, Kylie K; Tonoike, Yukiko Y; Bellantoni, Nicholas F NF
Publication Date: 2019

Variant appearance in text: rs28777
PubMed Link: 31498793
Variant Present in the following documents:
  • Main text
  • pone.0219279.pdf
View BVdb publication page



A GWAS in Latin Americans highlights the convergent evolution of lighter skin pigmentation in Eurasia.

Nature Communications
Adhikari, Kaustubh K; Mendoza-Revilla, Javier J; Sohail, Anood A; Fuentes-Guajardo, Macarena M; Lampert, Jodie J; Chacón-Duque, Juan Camilo JC; Hurtado, Malena M; Villegas, Valeria V; Granja, Vanessa V; Acuña-Alonzo, Victor V; Jaramillo, Claudia C; Arias, William W; Lozano, Rodrigo Barquera RB; Everardo, Paola P; Gómez-Valdés, Jorge J; Villamil-Ramírez, Hugo H; Silva de Cerqueira, Caio C CC; Hunemeier, Tábita T; Ramallo, Virginia V; Schuler-Faccini, Lavinia L; Salzano, Francisco M FM; Gonzalez-José, Rolando R; Bortolini, Maria-Cátira MC; Canizales-Quinteros, Samuel S; Gallo, Carla C; Poletti, Giovanni G; Bedoya, Gabriel G; Rothhammer, Francisco F; Tobin, Desmond J DJ; Fumagalli, Matteo M; Balding, David D; Ruiz-Linares, Andrés A
Publication Date: 2019-01-21

Variant appearance in text: rs28777
PubMed Link: 30664655
Variant Present in the following documents:
  • 41467_2018_8147_MOESM1_ESM.pdf
View BVdb publication page



A study in scarlet: MC1R as the main predictor of red hair and exemplar of the flip-flop effect.

Human Molecular Genetics
Zorina-Lichtenwalter, Katerina K; Lichtenwalter, Ryan N RN; Zaykin, Dima V DV; Parisien, Marc M; Gravel, Simon S; Bortsov, Andrey A; Diatchenko, Luda L
Publication Date: 2019-06-15

Variant appearance in text: rs28777
PubMed Link: 30657907
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genome-wide association meta-analysis of individuals of European ancestry identifies new loci explaining a substantial fraction of hair color variation and heritability.

Nature Genetics
Hysi, Pirro G PG; Valdes, Ana M AM; Liu, Fan F; Furlotte, Nicholas A NA; Evans, David M DM; Bataille, Veronique V; Visconti, Alessia A; Hemani, Gibran G; McMahon, George G; Ring, Susan M SM; Smith, George Davey GD; Duffy, David L DL; Zhu, Gu G; Gordon, Scott D SD; Medland, Sarah E SE; Lin, Bochao D BD; Willemsen, Gonneke G; Jan Hottenga, Jouke J; Vuckovic, Dragana D; Girotto, Giorgia G; Gandin, Ilaria I; Sala, Cinzia C; Concas, Maria Pina MP; Brumat, Marco M; Gasparini, Paolo P; Toniolo, Daniela D; Cocca, Massimiliano M; Robino, Antonietta A; Yazar, Seyhan S; Hewitt, Alex W AW; Chen, Yan Y; Zeng, Changqing C; Uitterlinden, Andre G AG; Ikram, M Arfan MA; Hamer, Merel A MA; van Duijn, Cornelia M CM; Nijsten, Tamar T; Mackey, David A DA; Falchi, Mario M; Boomsma, Dorret I DI; Martin, Nicholas G NG; , ; Hinds, David A DA; Kayser, Manfred M; Spector, Timothy D TD
Publication Date: 2018-05

Variant appearance in text: rs28777
PubMed Link: 29662168
Variant Present in the following documents:
  • NIHMS76542-supplement-Supplementary_notes_and_tables.pdf
View BVdb publication page



Associations between sun sensitive pigmentary genes and serum prostate specific antigen levels.

Plos One
Nair-Shalliker, Visalini V; Egger, Sam S; Chrzanowska, Agata A; Mason, Rebecca R; Waite, Louise L; Le Couteur, David D; Seibel, Markus J MJ; Handelsman, David J DJ; Cumming, Robert R; Smith, David P DP; Armstrong, Bruce K BK
Publication Date: 2018

Variant appearance in text: rs28777
PubMed Link: 29518100
Variant Present in the following documents:
  • Main text
  • pone.0193893.pdf
View BVdb publication page



Population genomics of Mesolithic Scandinavia: Investigating early postglacial migration routes and high-latitude adaptation.

Plos Biology
Günther, Torsten T; Malmström, Helena H; Svensson, Emma M EM; Omrak, Ayça A; Sánchez-Quinto, Federico F; Kılınç, Gülşah M GM; Krzewińska, Maja M; Eriksson, Gunilla G; Fraser, Magdalena M; Edlund, Hanna H; Munters, Arielle R AR; Coutinho, Alexandra A; Simões, Luciana G LG; Vicente, Mário M; Sjölander, Anders A; Jansen Sellevold, Berit B; Jørgensen, Roger R; Claes, Peter P; Shriver, Mark D MD; Valdiosera, Cristina C; Netea, Mihai G MG; Apel, Jan J; Lidén, Kerstin K; Skar, Birgitte B; Storå, Jan J; Götherström, Anders A; Jakobsson, Mattias M
Publication Date: 2018-01

Variant appearance in text: rs28777
PubMed Link: 29315301
Variant Present in the following documents:
  • pbio.2003703.s001.xlsx, sheet 1
View BVdb publication page



Ancestry inference of 96 population samples using microhaplotypes.

International Journal Of Legal Medicine
Bulbul, Ozlem O; Pakstis, Andrew J AJ; Soundararajan, Usha U; Gurkan, Cemal C; Brissenden, Jane E JE; Roscoe, Janet M JM; Evsanaa, Baigalmaa B; Togtokh, Ariunaa A; Paschou, Peristera P; Grigorenko, Elena L EL; Gurwitz, David D; Wootton, Sharon S; Lagace, Robert R; Chang, Joseph J; Speed, William C WC; Kidd, Kenneth K KK
Publication Date: 2018-05

Variant appearance in text: rs28777
PubMed Link: 29248957
Variant Present in the following documents:
  • Main text
  • 414_2017_Article_1748.pdf
View BVdb publication page



Predicting hair cortisol levels with hair pigmentation genes: a possible hair pigmentation bias.

Scientific Reports
Neumann, Alexander A; Noppe, Gerard G; Liu, Fan F; Kayser, Manfred M; Verhulst, Frank C FC; Jaddoe, Vincent W V VWV; van Rossum, Elisabeth F C EFC; Tiemeier, Henning H
Publication Date: 2017-08-17

Variant appearance in text: rs28777
PubMed Link: 28819144
Variant Present in the following documents:
  • Main text
View BVdb publication page



Evidence of selection on splicing-associated loci in human populations and relevance to disease loci mapping.

Scientific Reports
Gamazon, Eric R ER; Konkashbaev, Anuar A; Derks, Eske M EM; Cox, Nancy J NJ; Lee, Younghee Y
Publication Date: 2017-07-20

Variant appearance in text: rs28777
PubMed Link: 28729732
Variant Present in the following documents:
  • Main text
View BVdb publication page



Global skin colour prediction from DNA.

Human Genetics
Walsh, Susan S; Chaitanya, Lakshmi L; Breslin, Krystal K; Muralidharan, Charanya C; Bronikowska, Agnieszka A; Pospiech, Ewelina E; Koller, Julia J; Kovatsi, Leda L; Wollstein, Andreas A; Branicki, Wojciech W; Liu, Fan F; Kayser, Manfred M
Publication Date: 2017-07

Variant appearance in text: rs28777
PubMed Link: 28500464
Variant Present in the following documents:
  • Main text
  • 439_2017_Article_1808.pdf
View BVdb publication page



[Efficiency of 27-plex single nucleotide polymorphism multiplex system for ancestry inference in different populations].

Nan Fang Yi Ke Da Xue Xue Bao = Journal Of Southern Medical University
Feng, Xing-Ling XL; Sun, Qi-Fan QF; Liu, Hong H; Wei, Yi-Liang YL; DU, Wei-An WA; Li, Cai-Xia CX; Chen, Ling L; Liu, Chao C
Publication Date: 2016-04-20

Variant appearance in text: rs28777
PubMed Link: 28446414
Variant Present in the following documents:
  • Main text
View BVdb publication page



Multidisciplinary Identification of the Controversial Freedom Fighter Jörg Jenatsch, Assassinated 1639 in Chur, Switzerland.

Plos One
Haeusler, Martin M; Haas, Cordula C; Lösch, Sandra S; Moghaddam, Negahnaz N; Villa, Igor M IM; Walsh, Susan S; Kayser, Manfred M; Seiler, Roger R; Ruehli, Frank F; Janosa, Manuel M; Papageorgopoulou, Christina C
Publication Date: 2016

Variant appearance in text: rs28777
PubMed Link: 28030571
Variant Present in the following documents:
  • Main text
  • pone.0168014.pdf
View BVdb publication page



More comprehensive forensic genetic marker analyses for accurate human remains identification using massively parallel DNA sequencing.

Bmc Genomics
Ambers, Angie D AD; Churchill, Jennifer D JD; King, Jonathan L JL; Stoljarova, Monika M; Gill-King, Harrell H; Assidi, Mourad M; Abu-Elmagd, Muhammad M; Buhmeida, Abdelbaset A; Al-Qahtani, Mohammed M; Budowle, Bruce B
Publication Date: 2016-10-17

Variant appearance in text: rs28777
PubMed Link: 27766958
Variant Present in the following documents:
  • Main text
  • 12864_2016_3087_MOESM4_ESM.xlsx, sheet 1
View BVdb publication page



The genetics of an early Neolithic pastoralist from the Zagros, Iran.

Scientific Reports
Gallego-Llorente, M M; Connell, S S; Jones, E R ER; Merrett, D C DC; Jeon, Y Y; Eriksson, A A; Siska, V V; Gamba, C C; Meiklejohn, C C; Beyer, R R; Jeon, S S; Cho, Y S YS; Hofreiter, M M; Bhak, J J; Manica, A A; Pinhasi, R R
Publication Date: 2016-08-09

Variant appearance in text: rs28777
PubMed Link: 27502179
Variant Present in the following documents:
  • srep31326-s1.pdf
View BVdb publication page



Detection and interpretation of shared genetic influences on 42 human traits.

Nature Genetics
Pickrell, Joseph K JK; Berisa, Tomaz T; Liu, Jimmy Z JZ; Ségurel, Laure L; Tung, Joyce Y JY; Hinds, David A DA
Publication Date: 2016-07

Variant appearance in text: rs28777
PubMed Link: 27182965
Variant Present in the following documents:
  • NIHMS780506-supplement-17.pdf
View BVdb publication page



Pigmentary Markers in Danes--Associations with Quantitative Skin Colour, Nevi Count, Familial Atypical Multiple-Mole, and Melanoma Syndrome.

Plos One
Johansen, Peter P; Andersen, Jeppe Dyrberg JD; Madsen, Linnea Nørgård LN; Ullum, Henrik H; Glud, Martin M; Børsting, Claus C; Gniadecki, Robert R; Morling, Niels N
Publication Date: 2016

Variant appearance in text: rs28777
PubMed Link: 26938746
Variant Present in the following documents:
  • Main text
View BVdb publication page



Upper Palaeolithic genomes reveal deep roots of modern Eurasians.

Nature Communications
Jones, Eppie R ER; Gonzalez-Fortes, Gloria G; Connell, Sarah S; Siska, Veronika V; Eriksson, Anders A; Martiniano, Rui R; McLaughlin, Russell L RL; Gallego Llorente, Marcos M; Cassidy, Lara M LM; Gamba, Cristina C; Meshveliani, Tengiz T; Bar-Yosef, Ofer O; Müller, Werner W; Belfer-Cohen, Anna A; Matskevich, Zinovi Z; Jakeli, Nino N; Higham, Thomas F G TFG; Currat, Mathias M; Lordkipanidze, David D; Hofreiter, Michael M; Manica, Andrea A; Pinhasi, Ron R; Bradley, Daniel G DG
Publication Date: 2015-11-16

Variant appearance in text: rs28777
PubMed Link: 26567969
Variant Present in the following documents:
  • ncomms9912-s1.pdf
View BVdb publication page



Crowdsourced direct-to-consumer genomic analysis of a family quartet.

Bmc Genomics
Corpas, Manuel M; Valdivia-Granda, Willy W; Torres, Nazareth N; Greshake, Bastian B; Coletta, Alain A; Knaus, Alexej A; Harrison, Andrew P AP; Cariaso, Mike M; Moran, Federico F; Nielsen, Fiona F; Swan, Daniel D; Weiss Solís, David Y DY; Krawitz, Peter P; Schacherer, Frank F; Schols, Peter P; Yang, Huangming H; Borry, Pascal P; Glusman, Gustavo G; Robinson, Peter N PN
Publication Date: 2015-11-07

Variant appearance in text: rs28777
PubMed Link: 26547235
Variant Present in the following documents:
  • Main text
View BVdb publication page



A Common Genetic Origin for Early Farmers from Mediterranean Cardial and Central European LBK Cultures.

Molecular Biology And Evolution
Olalde, Iñigo I; Schroeder, Hannes H; Sandoval-Velasco, Marcela M; Vinner, Lasse L; Lobón, Irene I; Ramirez, Oscar O; Civit, Sergi S; García Borja, Pablo P; Salazar-García, Domingo C DC; Talamo, Sahra S; María Fullola, Josep J; Xavier Oms, Francesc F; Pedro, Mireia M; Martínez, Pablo P; Sanz, Montserrat M; Daura, Joan J; Zilhão, João J; Marquès-Bonet, Tomàs T; Gilbert, M Thomas P MT; Lalueza-Fox, Carles C
Publication Date: 2015-12

Variant appearance in text: rs28777
PubMed Link: 26337550
Variant Present in the following documents:
  • supp_msv181_cardial_supplementary_MBE_submission.pdf
View BVdb publication page



The more the merrier? How a few SNPs predict pigmentation phenotypes in the Northern German population.

European Journal Of Human Genetics : Ejhg
Caliebe, Amke A; Harder, Melanie M; Schuett, Rebecca R; Krawczak, Michael M; Nebel, Almut A; von Wurmb-Schwark, Nicole N
Publication Date: 2016-05

Variant appearance in text: rs28777
PubMed Link: 26286644
Variant Present in the following documents:
  • Main text
View BVdb publication page



Identification of the remains of King Richard III.

Nature Communications
King, Turi E TE; Fortes, Gloria Gonzalez GG; Balaresque, Patricia P; Thomas, Mark G MG; Balding, David D; Maisano Delser, Pierpaolo P; Neumann, Rita R; Parson, Walther W; Knapp, Michael M; Walsh, Susan S; Tonasso, Laure L; Holt, John J; Kayser, Manfred M; Appleby, Jo J; Forster, Peter P; Ekserdjian, David D; Hofreiter, Michael M; Schürer, Kevin K
Publication Date: 2014-12-02

Variant appearance in text: rs28777
PubMed Link: 25463651
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genome flux and stasis in a five millennium transect of European prehistory.

Nature Communications
Gamba, Cristina C; Jones, Eppie R ER; Teasdale, Matthew D MD; McLaughlin, Russell L RL; Gonzalez-Fortes, Gloria G; Mattiangeli, Valeria V; Domboróczki, László L; Kővári, Ivett I; Pap, Ildikó I; Anders, Alexandra A; Whittle, Alasdair A; Dani, János J; Raczky, Pál P; Higham, Thomas F G TF; Hofreiter, Michael M; Bradley, Daniel G DG; Pinhasi, Ron R
Publication Date: 2014-10-21

Variant appearance in text: rs28777
PubMed Link: 25334030
Variant Present in the following documents:
  • ncomms6257-s1.pdf
View BVdb publication page



Genetic factors associated with naevus count and dermoscopic patterns: preliminary results from the Study of Nevi in Children (SONIC).

The British Journal Of Dermatology
Orlow, I I; Satagopan, J M JM; Berwick, M M; Enriquez, H L HL; White, K A M KA; Cheung, K K; Dusza, S W SW; Oliveria, S A SA; Marchetti, M A MA; Scope, A A; Marghoob, A A AA; Halpern, A C AC
Publication Date: 2015-04

Variant appearance in text: rs28777
PubMed Link: 25307738
Variant Present in the following documents:
  • Main text
View BVdb publication page



Ancient human genomes suggest three ancestral populations for present-day Europeans.

Nature
Lazaridis, Iosif I; Patterson, Nick N; Mittnik, Alissa A; Renaud, Gabriel G; Mallick, Swapan S; Kirsanow, Karola K; Sudmant, Peter H PH; Schraiber, Joshua G JG; Castellano, Sergi S; Lipson, Mark M; Berger, Bonnie B; Economou, Christos C; Bollongino, Ruth R; Fu, Qiaomei Q; Bos, Kirsten I KI; Nordenfelt, Susanne S; Li, Heng H; de Filippo, Cesare C; Prüfer, Kay K; Sawyer, Susanna S; Posth, Cosimo C; Haak, Wolfgang W; Hallgren, Fredrik F; Fornander, Elin E; Rohland, Nadin N; Delsate, Dominique D; Francken, Michael M; Guinet, Jean-Michel JM; Wahl, Joachim J; Ayodo, George G; Babiker, Hamza A HA; Bailliet, Graciela G; Balanovska, Elena E; Balanovsky, Oleg O; Barrantes, Ramiro R; Bedoya, Gabriel G; Ben-Ami, Haim H; Bene, Judit J; Berrada, Fouad F; Bravi, Claudio M CM; Brisighelli, Francesca F; Busby, George B J GB; Cali, Francesco F; Churnosov, Mikhail M; Cole, David E C DE; Corach, Daniel D; Damba, Larissa L; van Driem, George G; Dryomov, Stanislav S; Dugoujon, Jean-Michel JM; Fedorova, Sardana A SA; Gallego Romero, Irene I; Gubina, Marina M; Hammer, Michael M; Henn, Brenna M BM; Hervig, Tor T; Hodoglugil, Ugur U; Jha, Aashish R AR; Karachanak-Yankova, Sena S; Khusainova, Rita R; Khusnutdinova, Elza E; Kittles, Rick R; Kivisild, Toomas T; Klitz, William W; Kučinskas, Vaidutis V; Kushniarevich, Alena A; Laredj, Leila L; Litvinov, Sergey S; Loukidis, Theologos T; Mahley, Robert W RW; Melegh, Béla B; Metspalu, Ene E; Molina, Julio J; Mountain, Joanna J; Näkkäläjärvi, Klemetti K; Nesheva, Desislava D; Nyambo, Thomas T; Osipova, Ludmila L; Parik, Jüri J; Platonov, Fedor F; Posukh, Olga O; Romano, Valentino V; Rothhammer, Francisco F; Rudan, Igor I; Ruizbakiev, Ruslan R; Sahakyan, Hovhannes H; Sajantila, Antti A; Salas, Antonio A; Starikovskaya, Elena B EB; Tarekegn, Ayele A; Toncheva, Draga D; Turdikulova, Shahlo S; Uktveryte, Ingrida I; Utevska, Olga O; Vasquez, René R; Villena, Mercedes M; Voevoda, Mikhail M; Winkler, Cheryl A CA; Yepiskoposyan, Levon L; Zalloua, Pierre P; Zemunik, Tatijana T; Cooper, Alan A; Capelli, Cristian C; Thomas, Mark G MG; Ruiz-Linares, Andres A; Tishkoff, Sarah A SA; Singh, Lalji L; Thangaraj, Kumarasamy K; Villems, Richard R; Comas, David D; Sukernik, Rem R; Metspalu, Mait M; Meyer, Matthias M; Eichler, Evan E EE; Burger, Joachim J; Slatkin, Montgomery M; Pääbo, Svante S; Kelso, Janet J; Reich, David D; Krause, Johannes J
Publication Date: 2014-09-18

Variant appearance in text: rs28777
PubMed Link: 25230663
Variant Present in the following documents:
  • NIHMS613260-supplement-supplement_1.pdf
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Bayesian variable selection for hierarchical gene-environment and gene-gene interactions.

Human Genetics
Liu, Changlu C; Ma, Jianzhong J; Amos, Christopher I CI
Publication Date: 2015-01

Variant appearance in text: rs28777
PubMed Link: 25154630
Variant Present in the following documents:
  • Main text
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Variants associated with susceptibility to pancreatic cancer and melanoma do not reciprocally affect risk.

Cancer Epidemiology, Biomarkers & Prevention : A Publication Of The American Association For Cancer Research, Cosponsored By The American Society Of Preventive Oncology
Wu, Lang L; Goldstein, Alisa M AM; Yu, Kai K; Yang, Xiaohong Rose XR; Rabe, Kari G KG; Arslan, Alan A AA; Canzian, Federico F; Wolpin, Brian M BM; Stolzenberg-Solomon, Rachael R; Amundadottir, Laufey T LT; Petersen, Gloria M GM
Publication Date: 2014-06

Variant appearance in text: rs28777
PubMed Link: 24642353
Variant Present in the following documents:
  • Main text
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Allelic frequencies of 20 visible phenotype variants in the korean population.

Genomics & Informatics
Lim, Ji Eun JE; Oh, Bermseok B
Publication Date: 2013-06

Variant appearance in text: rs28777
PubMed Link: 23843775
Variant Present in the following documents:
  • Main text
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Update on the Epidemiology of Melanoma.

Current Dermatology Reports
Chen, Steven T ST; Geller, Alan C AC; Tsao, Hensin H
Publication Date: 2013-03-01

Variant appearance in text: rs28777
PubMed Link: 23580930
Variant Present in the following documents:
  • Main text
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Testing for associations between loci and environmental gradients using latent factor mixed models.

Molecular Biology And Evolution
Frichot, Eric E; Schoville, Sean D SD; Bouchard, Guillaume G; François, Olivier O
Publication Date: 2013-07

Variant appearance in text: rs28777
PubMed Link: 23543094
Variant Present in the following documents:
  • Main text
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Bona fide colour: DNA prediction of human eye and hair colour from ancient and contemporary skeletal remains.

Investigative Genetics
Draus-Barini, Jolanta J; Walsh, Susan S; Pośpiech, Ewelina E; Kupiec, Tomasz T; Głąb, Henryk H; Branicki, Wojciech W; Kayser, Manfred M
Publication Date: 2013-01-14

Variant appearance in text: rs28777
PubMed Link: 23317428
Variant Present in the following documents:
  • Main text
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Human pigmentation genes under environmental selection.

Genome Biology
Sturm, Richard A RA; Duffy, David L DL
Publication Date: 2012-09-26

Variant appearance in text: rs28777
PubMed Link: 23110848
Variant Present in the following documents:
  • Main text
  • gb-2012-13-9-248.pdf
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Report of a novel OCA2 gene mutation and an investigation of OCA2 variants on melanoma risk in a familial melanoma pedigree.

Journal Of Dermatological Science
Hawkes, Jason E JE; Cassidy, Pamela B PB; Manga, Prashiela P; Boissy, Raymond E RE; Goldgar, David D; Cannon-Albright, Lisa L; Florell, Scott R SR; Leachman, Sancy A SA
Publication Date: 2013-01

Variant appearance in text: rs28777
PubMed Link: 23103111
Variant Present in the following documents:
  • Main text
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Genome-wide association study identifies novel loci predisposing to cutaneous melanoma.

Human Molecular Genetics
Amos, Christopher I CI; Wang, Li-E LE; Lee, Jeffrey E JE; Gershenwald, Jeffrey E JE; Chen, Wei V WV; Fang, Shenying S; Kosoy, Roman R; Zhang, Mingfeng M; Qureshi, Abrar A AA; Vattathil, Selina S; Schacherer, Christopher W CW; Gardner, Julie M JM; Wang, Yuling Y; Bishop, D Tim DT; Barrett, Jennifer H JH; , ; MacGregor, Stuart S; Hayward, Nicholas K NK; Martin, Nicholas G NG; Duffy, David L DL; , ; Mann, Graham J GJ; Cust, Anne A; Hopper, John J; , ; Brown, Kevin M KM; Grimm, Elizabeth A EA; Xu, Yaji Y; Han, Younghun Y; Jing, Kaiyan K; McHugh, Caitlin C; Laurie, Cathy C CC; Doheny, Kim F KF; Pugh, Elizabeth W EW; Seldin, Michael F MF; Han, Jiali J; Wei, Qingyi Q
Publication Date: 2011-12-15

Variant appearance in text: rs28777
PubMed Link: 21926416
Variant Present in the following documents:
  • Main text
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A customized pigmentation SNP array identifies a novel SNP associated with melanoma predisposition in the SLC45A2 gene.

Plos One
Ibarrola-Villava, Maider M; Fernandez, Lara P LP; Alonso, Santos S; Boyano, M Dolores MD; Peña-Chilet, Maria M; Pita, Guillermo G; Aviles, Jose A JA; Mayor, Matias M; Gomez-Fernandez, Cristina C; Casado, Beatriz B; Martin-Gonzalez, Manuel M; Izagirre, Neskuts N; De la Rua, Concepcion C; Asumendi, Aintzane A; Perez-Yarza, Gorka G; Arroyo-Berdugo, Yoana Y; Boldo, Enrique E; Lozoya, Rafael R; Torrijos-Aguilar, Arantxa A; Pitarch, Ana A; Pitarch, Gerard G; Sanchez-Motilla, Jose M JM; Valcuende-Cavero, Francisca F; Tomas-Cabedo, Gloria G; Perez-Pastor, Gemma G; Diaz-Perez, Jose L JL; Gardeazabal, Jesus J; Martinez de Lizarduy, Iñigo I; Sanchez-Diez, Ana A; Valdes, Carlos C; Pizarro, Angel A; Casado, Mariano M; Carretero, Gregorio G; Botella-Estrada, Rafael R; Nagore, Eduardo E; Lazaro, Pablo P; Lluch, Ana A; Benitez, Javier J; Martinez-Cadenas, Conrado C; Ribas, Gloria G
Publication Date: 2011-04-29

Variant appearance in text: rs28777
PubMed Link: 21559390
Variant Present in the following documents:
  • Main text
  • pone.0019271.pdf
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Adaptations to climate-mediated selective pressures in humans.

Plos Genetics
Hancock, Angela M AM; Witonsky, David B DB; Alkorta-Aranburu, Gorka G; Beall, Cynthia M CM; Gebremedhin, Amha A; Sukernik, Rem R; Utermann, Gerd G; Pritchard, Jonathan K JK; Coop, Graham G; Di Rienzo, Anna A
Publication Date: 2011-04

Variant appearance in text: rs28777
PubMed Link: 21533023
Variant Present in the following documents:
  • Main text
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Genome-wide association study SNPs in the human genome diversity project populations: does selection affect unlinked SNPs with shared trait associations?

Plos Genetics
Casto, Amanda M AM; Feldman, Marcus W MW
Publication Date: 2011-01-06

Variant appearance in text: rs28777
PubMed Link: 21253569
Variant Present in the following documents:
  • Main text
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Model-based prediction of human hair color using DNA variants.

Human Genetics
Branicki, Wojciech W; Liu, Fan F; van Duijn, Kate K; Draus-Barini, Jolanta J; Pośpiech, Ewelina E; Walsh, Susan S; Kupiec, Tomasz T; Wojas-Pelc, Anna A; Kayser, Manfred M
Publication Date: 2011-04

Variant appearance in text: rs28777
PubMed Link: 21197618
Variant Present in the following documents:
  • Main text
  • 439_2010_Article_939.pdf
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