Publications:

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The mutational landscape of cancer's vulnerability to ionizing radiation.

Clinical Cancer Research : An Official Journal Of The American Association For Cancer Research

Gopal, Priyanka P; Yard, Brian D BD; Petty, Aaron A; Lal, Jessica C JC; Bera, Titas K TK; Hoang, Trung Q TQ; Buhimschi, Alexandru B AB; Abazeed, Mohamed E ME

Publication Date: 2022-10-12

Variant appearance in text: BRAF: H574N

PubMed Link: 36222846

Variant Present in the following documents:

• ccr-22-1914_supplementary_data_2_suppds2.xlsx, sheet 1
• ccr-22-1914_supplementary_data_3_suppds3.xlsx, sheet 1

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Cell Painting predicts impact of lung cancer variants.

Molecular Biology Of The Cell

Caicedo, Juan C JC; Arevalo, John J; Piccioni, Federica F; Bray, Mark-Anthony MA; Hartland, Cathy L CL; Wu, Xiaoyun X; Brooks, Angela N AN; Berger, Alice H AH; Boehm, Jesse S JS; Carpenter, Anne E AE; Singh, Shantanu S

Publication Date: 2022-05-15

Variant appearance in text: BRAF: H574N

PubMed Link: 35353015

Variant Present in the following documents:

• Main text
• mbc-33-ar49.pdf

View BVdb publication page

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Clonal selection confers distinct evolutionary trajectories in BRAF-driven cancers.

Nature Communications

Gopal, Priyanka P; Sarihan, Elif Irem EI; Chie, Eui Kyu EK; Kuzmishin, Gwendolyn G; Doken, Semihcan S; Pennell, Nathan A NA; Raymond, Daniel P DP; Murthy, Sudish C SC; Ahmad, Usman U; Raja, Siva S; Almeida, Francisco F; Sethi, Sonali S; Gildea, Thomas R TR; Peacock, Craig D CD; Adams, Drew J DJ; Abazeed, Mohamed E ME

Publication Date: 2019-11-13

Variant appearance in text: BRAF: H574N

PubMed Link: 31723142

Variant Present in the following documents:

• 41467_2019_13161_MOESM5_ESM.xlsx, sheet 1

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Resectable lung lesions malignancy assessment and cancer detection by ultra-deep sequencing of targeted gene mutations in plasma cell-free DNA.

Journal Of Medical Genetics

Peng, Muyun M; Xie, Yuancai Y; Li, Xiaohua X; Qian, Youhui Y; Tu, Xiaonian X; Yao, Xumei X; Cheng, Fangsheng F; Xu, Feiyue F; Kong, Deju D; He, Bing B; Liu, Chaoyu C; Cao, Fengjun F; Yang, Haoxian H; Yu, Fenglei F; Xu, Chuanbo C; Tian, Geng G

Publication Date: 2019-10

Variant appearance in text: BRAF: 1720C>A; His574Asn

PubMed Link: 30981987

Variant Present in the following documents:

• jmedgenet-2018-105825supp002.xlsx, sheet 4

View BVdb publication page

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Circulating tumour DNA sequence analysis as an alternative to multiple myeloma bone marrow aspirates.

Nature Communications

Kis, Olena O; Kaedbey, Rayan R; Chow, Signy S; Danesh, Arnavaz A; Dowar, Mark M; Li, Tiantian T; Li, Zhihua Z; Liu, Jessica J; Mansour, Mark M; Masih-Khan, Esther E; Zhang, Tong T; Bratman, Scott V SV; Oza, Amit M AM; Kamel-Reid, Suzanne S; Trudel, Suzanne S; Pugh, Trevor J TJ

Publication Date: 2017-05-11

Variant appearance in text: BRAF: 1720C>A

PubMed Link: 28492226

Variant Present in the following documents:

• ncomms15086-s3.xlsx, sheet 1

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High-throughput Phenotyping of Lung Cancer Somatic Mutations.

Cancer Cell

Berger, Alice H AH; Brooks, Angela N AN; Wu, Xiaoyun X; Shrestha, Yashaswi Y; Chouinard, Candace C; Piccioni, Federica F; Bagul, Mukta M; Kamburov, Atanas A; Imielinski, Marcin M; Hogstrom, Larson L; Zhu, Cong C; Yang, Xiaoping X; Pantel, Sasha S; Sakai, Ryo R; Watson, Jacqueline J; Kaplan, Nathan N; Campbell, Joshua D JD; Singh, Shantanu S; Root, David E DE; Narayan, Rajiv R; Natoli, Ted T; Lahr, David L DL; Tirosh, Itay I; Tamayo, Pablo P; Getz, Gad G; Wong, Bang B; Doench, John J; Subramanian, Aravind A; Golub, Todd R TR; Meyerson, Matthew M; Boehm, Jesse S JS

Publication Date: 2016-08-08

Variant appearance in text: BRAF: H574N

PubMed Link: 27478040

Variant Present in the following documents:

• Main text

View BVdb publication page

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Intratumoral KIT mutational heterogeneity and recurrent KIT/ PDGFRA mutations in KIT/PDGFRA wild-type gastrointestinal stromal tumors.

Oncotarget

Gao, Jing J; Li, Jian J; Li, Yanyan Y; Li, Zhongwu Z; Gong, Jifang J; Wu, Jian J; Liu, Na N; Dong, Bin B; Qi, Changsong C; Li, Jie J; Shen, Lin L

Publication Date: 2016-05-24

Variant appearance in text: BRAF: 1720C>A; H574N

PubMed Link: 26848617

Variant Present in the following documents:

• oncotarget-07-30241-s002.xlsx, sheet 1

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Structure-energy-based predictions and network modelling of RASopathy and cancer missense mutations.

Molecular Systems Biology

Kiel, Christina C; Serrano, Luis L

Publication Date: 2014-05-06

Variant appearance in text: BRAF: H574N

PubMed Link: 24803665

Variant Present in the following documents:

• MSB-10-5-727-s13.xls, sheet 1

View BVdb publication page

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