Publications:

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Integrative pan-cancer genomic and transcriptomic analyses of refractory metastatic cancer.

Cancer Discovery

Pradat, Yoann Y; Viot, Julien J; Yurchenko, Andrey A AA; Gunbin, Konstantin K; Cerbone, Luigi L; Deloger, Marc M; Grisay, Guillaume G; Verlingue, Loic L; Scott, Veronique V; Padioleau, Ismael I; Panunzi, Leonardo L; Michiels, Stefan S; Hollebecque, Antoine A; Jules-Clement, Gerome G; Mezquita, Laura L; Laine, Antoine A; Loriot, Yohann Y; Besse, Benjamin B; Friboulet, Luc L; Andre, Fabrice F; Cournede, Paul-Henry PH; Gautheret, Daniel D; Nikolaev, Sergey I SI

Publication Date: 2023-03-02

Variant appearance in text: EGFR: His47Arg

PubMed Link: 36862804

Variant Present in the following documents:

• cd-22-0966_supplementary_tables_s1-s11_suppst1.xlsx, sheet 6

View BVdb publication page

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Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery.

Nature Communications

Havugimana, Pierre C PC; Goel, Raghuveera Kumar RK; Phanse, Sadhna S; Youssef, Ahmed A; Padhorny, Dzmitry D; Kotelnikov, Sergei S; Kozakov, Dima D; Emili, Andrew A

Publication Date: 2022-07-13

Variant appearance in text: EGFR: 140A>G; H47R

PubMed Link: 35831314

Variant Present in the following documents:

• 41467_2022_31809_MOESM8_ESM.xlsx, sheet 3

View BVdb publication page

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Mutational analysis of driver genes defines the colorectal adenoma: in situ carcinoma transition.

Scientific Reports

Jungwirth, Jiri J; Urbanova, Marketa M; Boot, Arnoud A; Hosek, Petr P; Bendova, Petra P; Siskova, Anna A; Svec, Jiri J; Kment, Milan M; Tumova, Daniela D; Summerova, Sandra S; Benes, Zdenek Z; Buchler, Tomas T; Kohout, Pavel P; Hucl, Tomas T; Matej, Radoslav R; Vodickova, Ludmila L; van Wezel, Tom T; Vodicka, Pavel P; Vymetalkova, Veronika V

Publication Date: 2022-02-16

Variant appearance in text: EGFR: H47R

PubMed Link: 35173208

Variant Present in the following documents:

• Main text
• 41598_2022_Article_6498.pdf

View BVdb publication page

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New insights into the genetic contribution of ALDH2 rs671 in pancreatic carcinogenesis: Evaluation by mediation analysis.

Cancer Science

Koyanagi, Yuriko N YN; Oze, Isao I; Kasugai, Yumiko Y; Kawakatsu, Yukino Y; Taniyama, Yukari Y; Hara, Kazuo K; Shimizu, Yasuhiro Y; Imoto, Issei I; Ito, Hidemi H; Matsuo, Keitaro K

Publication Date: 2022-04

Variant appearance in text: EGFR: His47Arg

PubMed Link: 35102643

Variant Present in the following documents:

• CAS-113-1441.pdf

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Plasma ctDNA is a tumor tissue surrogate and enables clinical-genomic stratification of metastatic bladder cancer.

Nature Communications

Vandekerkhove, Gillian G; Lavoie, Jean-Michel JM; Annala, Matti M; Murtha, Andrew J AJ; Sundahl, Nora N; Walz, Simon S; Sano, Takeshi T; Taavitsainen, Sinja S; Ritch, Elie E; Fazli, Ladan L; Hurtado-Coll, Antonio A; Wang, Gang G; Nykter, Matti M; Black, Peter C PC; Todenhöfer, Tilman T; Ost, Piet P; Gibb, Ewan A EA; Chi, Kim N KN; Eigl, Bernhard J BJ; Wyatt, Alexander W AW

Publication Date: 2021-01-08

Variant appearance in text: EGFR: H47R

PubMed Link: 33420073

Variant Present in the following documents:

• 41467_2020_20493_MOESM3_ESM.xlsx, sheet 4

View BVdb publication page

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Identification of predictors of drug sensitivity using patient-derived models of esophageal squamous cell carcinoma.

Nature Communications

Su, Dan D; Zhang, Dadong D; Jin, Jiaoyue J; Ying, Lisha L; Han, Miao M; Chen, Kaiyan K; Li, Bin B; Wu, Junzhou J; Xie, Zhenghua Z; Zhang, Fanrong F; Lin, Yihui Y; Cheng, Guoping G; Li, Jing-Yu JY; Huang, Minran M; Wang, Jinchao J; Wang, Kailai K; Zhang, Jianjun J; Li, Fugen F; Xiong, Lei L; Futreal, Andrew A; Mao, Weimin W

Publication Date: 2019-11-07

Variant appearance in text: EGFR: 140A>G; H47R

PubMed Link: 31700061

Variant Present in the following documents:

• 41467_2019_12846_MOESM6_ESM.xlsx, sheet 1

View BVdb publication page

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Pan-urologic cancer genomic subtypes that transcend tissue of origin.

Nature Communications

Chen, Fengju F; Zhang, Yiqun Y; Bossé, Dominick D; Lalani, Aly-Khan A AA; Hakimi, A Ari AA; Hsieh, James J JJ; Choueiri, Toni K TK; Gibbons, Don L DL; Ittmann, Michael M; Creighton, Chad J CJ

Publication Date: 2017-08-04

Variant appearance in text: EGFR: 140A>G; H47R

PubMed Link: 28775315

Variant Present in the following documents:

• 41467_2017_289_MOESM7_ESM.xlsx, sheet 1

View BVdb publication page

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Whole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of Pakistan.

Bmc Genomics

Ilyas, Muhammad M; Kim, Jong-Soo JS; Cooper, Jesse J; Shin, Young-Ah YA; Kim, Hak-Min HM; Cho, Yun Sung YS; Hwang, Seungwoo S; Kim, Hyunho H; Moon, Jaewoo J; Chung, Oksung O; Jun, JeHoon J; Rastogi, Achal A; Song, Sanghoon S; Ko, Junsu J; Manica, Andrea A; Rahman, Ziaur Z; Husnain, Tayyab T; Bhak, Jong J

Publication Date: 2015-03-12

Variant appearance in text: EGFR: H47R

PubMed Link: 25887915

Variant Present in the following documents:

• 12864_2015_1290_MOESM7_ESM.xlsx, sheet 1

View BVdb publication page

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Mutations in SETD2 and genes affecting histone H3K36 methylation target hemispheric high-grade gliomas.

Acta Neuropathologica

Fontebasso, Adam M AM; Schwartzentruber, Jeremy J; Khuong-Quang, Dong-Anh DA; Liu, Xiao-Yang XY; Sturm, Dominik D; Korshunov, Andrey A; Jones, David T W DT; Witt, Hendrik H; Kool, Marcel M; Albrecht, Steffen S; Fleming, Adam A; Hadjadj, Djihad D; Busche, Stephan S; Lepage, Pierre P; Montpetit, Alexandre A; Staffa, Alfredo A; Gerges, Noha N; Zakrzewska, Magdalena M; Zakrzewski, Krzystof K; Liberski, Pawel P PP; Hauser, Peter P; Garami, Miklos M; Klekner, Almos A; Bognar, Laszlo L; Zadeh, Gelareh G; Faury, Damien D; Pfister, Stefan M SM; Jabado, Nada N; Majewski, Jacek J

Publication Date: 2013-05

Variant appearance in text: EGFR: H47R

PubMed Link: 23417712

Variant Present in the following documents:

• 401_2013_1095_MOESM1_ESM.pdf

View BVdb publication page

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