Formalin fixation increases deamination mutation signature but should not lead to false positive mutations in clinical practice.
Plos One
Prentice, Leah M LM; Miller, Ruth R RR; Knaggs, Jeff J; Mazloomian, Alborz A; Aguirre Hernandez, Rosalia R; Franchini, Patrick P; Parsa, Kourosh K; Tessier-Cloutier, Basile B; Lapuk, Anna A; Huntsman, David D; Schaeffer, David F DF; Sheffield, Brandon S BS
Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas.
Cell Reports
Way, Gregory P GP; Sanchez-Vega, Francisco F; La, Konnor K; Armenia, Joshua J; Chatila, Walid K WK; Luna, Augustin A; Sander, Chris C; Cherniack, Andrew D AD; Mina, Marco M; Ciriello, Giovanni G; Schultz, Nikolaus N; , ; Sanchez, Yolanda Y; Greene, Casey S CS
Impact of tissue type and content of neoplastic cells of samples on the quality of epidermal growth factor receptor mutation analysis among patients with lung adenocarcinoma.
Molecular Medicine Reports
Paliogiannis, Panagiotis P; Attene, Federico F; Cossu, Antonio A; Defraia, Efisio E; Porcu, Giuseppe G; Carta, Annamaria A; Sotgiu, Maria Ignazia MI; Pazzola, Antonio A; Cordero, Lorenzo L; Capelli, Francesca F; Fadda, Giovanni Maria GM; Ortu, Salvatore S; Sotgiu, Giovanni G; Palomba, Grazia G; Sini, Maria Cristina MC; Palmieri, Giuseppe G; Colombino, Maria M