Workflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues.
Nature Communications
Abelin, Jennifer G JG; Bergstrom, Erik J EJ; Rivera, Keith D KD; Taylor, Hannah B HB; Klaeger, Susan S; Xu, Charles C; Verzani, Eva K EK; Jackson White, C C; Woldemichael, Hilina B HB; Virshup, Maya M; Olive, Meagan E ME; Maynard, Myranda M; Vartany, Stephanie A SA; Allen, Joseph D JD; Phulphagar, Kshiti K; Harry Kane, M M; Rachimi, Suzanna S; Mani, D R DR; Gillette, Michael A MA; Satpathy, Shankha S; Clauser, Karl R KR; Udeshi, Namrata D ND; Carr, Steven A SA
A Phase II Trial of Guadecitabine plus Atezolizumab in Metastatic Urothelial Carcinoma Progressing after Initial Immune Checkpoint Inhibitor Therapy.
Clinical Cancer Research : An Official Journal Of The American Association For Cancer Research
Jang, H Josh HJ; Hostetter, Galen G; MacFarlane, Alexander W AW; Madaj, Zachary Z; Ross, Eric A EA; Hinoue, Toshinori T; Kulchycki, Justin R JR; Burgos, Ryan S RS; Tafseer, Mahvish M; Alpaugh, R Katherine RK; Schwebel, Candice L CL; Kokate, Rutika R; Geynisman, Daniel M DM; Zibelman, Matthew R MR; Ghatalia, Pooja P; Nichols, Peter W PW; Chung, Woonbok W; Madzo, Jozef J; Hahn, Noah M NM; Quinn, David I DI; Issa, Jean-Pierre J JJ; Topper, Michael J MJ; Baylin, Stephen B SB; Shen, Hui H; Campbell, Kerry S KS; Jones, Peter A PA; Plimack, Elizabeth R ER
Whole-genome sequencing identifies new candidate genes for nonobstructive azoospermia.
Andrology
Malcher, Agnieszka A; Stokowy, Tomasz T; Berman, Andrea A; Olszewska, Marta M; Jedrzejczak, Piotr P; Sielski, Dawid D; Nowakowski, Adam A; Rozwadowska, Natalia N; Yatsenko, Alexander N AN; Kurpisz, Maciej K MK
The prognostic effects of somatic mutations in ER-positive breast cancer.
Nature Communications
Griffith, Obi L OL; Spies, Nicholas C NC; Anurag, Meenakshi M; Griffith, Malachi M; Luo, Jingqin J; Tu, Dongsheng D; Yeo, Belinda B; Kunisaki, Jason J; Miller, Christopher A CA; Krysiak, Kilannin K; Hundal, Jasreet J; Ainscough, Benjamin J BJ; Skidmore, Zachary L ZL; Campbell, Katie K; Kumar, Runjun R; Fronick, Catrina C; Cook, Lisa L; Snider, Jacqueline E JE; Davies, Sherri S; Kavuri, Shyam M SM; Chang, Eric C EC; Magrini, Vincent V; Larson, David E DE; Fulton, Robert S RS; Liu, Shuzhen S; Leung, Samuel S; Voduc, David D; Bose, Ron R; Dowsett, Mitch M; Wilson, Richard K RK; Nielsen, Torsten O TO; Mardis, Elaine R ER; Ellis, Matthew J MJ
Next-generation DNA sequencing identifies novel gene variants and pathways involved in specific language impairment.
Scientific Reports
Chen, Xiaowei Sylvia XS; Reader, Rose H RH; Hoischen, Alexander A; Veltman, Joris A JA; Simpson, Nuala H NH; Francks, Clyde C; Newbury, Dianne F DF; Fisher, Simon E SE
Publication Date: 2017-04-25
Variant appearance in text: ZFPM2: M544I; rs187043152
Disorders of sex development: insights from targeted gene sequencing of a large international patient cohort.
Genome Biology
Eggers, Stefanie S; Sadedin, Simon S; van den Bergen, Jocelyn A JA; Robevska, Gorjana G; Ohnesorg, Thomas T; Hewitt, Jacqueline J; Lambeth, Luke L; Bouty, Aurore A; Knarston, Ingrid M IM; Tan, Tiong Yang TY; Cameron, Fergus F; Werther, George G; Hutson, John J; O'Connell, Michele M; Grover, Sonia R SR; Heloury, Yves Y; Zacharin, Margaret M; Bergman, Philip P; Kimber, Chris C; Brown, Justin J; Webb, Nathalie N; Hunter, Matthew F MF; Srinivasan, Shubha S; Titmuss, Angela A; Verge, Charles F CF; Mowat, David D; Smith, Grahame G; Smith, Janine J; Ewans, Lisa L; Shalhoub, Carolyn C; Crock, Patricia P; Cowell, Chris C; Leong, Gary M GM; Ono, Makato M; Lafferty, Antony R AR; Huynh, Tony T; Visser, Uma U; Choong, Catherine S CS; McKenzie, Fiona F; Pachter, Nicholas N; Thompson, Elizabeth M EM; Couper, Jennifer J; Baxendale, Anne A; Gecz, Jozef J; Wheeler, Benjamin J BJ; Jefferies, Craig C; MacKenzie, Karen K; Hofman, Paul P; Carter, Philippa P; King, Richard I RI; Krausz, Csilla C; van Ravenswaaij-Arts, Conny M A CM; Looijenga, Leendert L; Drop, Sten S; Riedl, Stefan S; Cools, Martine M; Dawson, Angelika A; Juniarto, Achmad Zulfa AZ; Khadilkar, Vaman V; Khadilkar, Anuradha A; Bhatia, Vijayalakshmi V; Dũng, Vũ Chí VC; Atta, Irum I; Raza, Jamal J; Thi Diem Chi, Nguyen N; Hao, Tran Kiem TK; Harley, Vincent V; Koopman, Peter P; Warne, Garry G; Faradz, Sultana S; Oshlack, Alicia A; Ayers, Katie L KL; Sinclair, Andrew H AH
Exome sequencing identifies rare variants in multiple genes in atrioventricular septal defect.
Genetics In Medicine : Official Journal Of The American College Of Medical Genetics
D'Alessandro, Lisa C A LC; Al Turki, Saeed S; Manickaraj, Ashok Kumar AK; Manase, Dorin D; Mulder, Barbara J M BJ; Bergin, Lynn L; Rosenberg, Herschel C HC; Mondal, Tapas T; Gordon, Elaine E; Lougheed, Jane J; Smythe, John J; Devriendt, Koen K; Bhattacharya, Shoumo S; Watkins, Hugh H; Bentham, Jamie J; Bowdin, Sarah S; Hurles, Matthew E ME; Mital, Seema S
Publication Date: 2016-02
Variant appearance in text: ZFPM2: M544I; rs187043152
Whole-genome sequencing of the world's oldest people.
Plos One
Gierman, Hinco J HJ; Fortney, Kristen K; Roach, Jared C JC; Coles, Natalie S NS; Li, Hong H; Glusman, Gustavo G; Markov, Glenn J GJ; Smith, Justin D JD; Hood, Leroy L; Coles, L Stephen LS; Kim, Stuart K SK