Publications:

---

HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: TG: 340A>G

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

---

Major depressive disorder is correlated with the mitochondrial ND1 T3394C mutation in two Han Chinese families: Two case reports.

World Journal Of Psychiatry

Jing, Pan P; Mei, Xi X; Zhang, Yuan-Yuan YY; Zheng, Fei-Jie FJ; Luo, Xiao-Min XM; Liu, Ling-Jiang LJ; Yu, Hai-Hang HH; Zhang, Xiao-Bin XB

Publication Date: 2023-02-19

Variant appearance in text: TG: Thr114Ala

PubMed Link: 36925947

Variant Present in the following documents:

• WJP-13-75.pdf

View BVdb publication page

---

Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: TG: 340A>G

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 9
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 8

View BVdb publication page

---

Genetic variants in African-American and Hispanic patients with breast cancer.

Oncology Letters

Dutta, Pranabananda P; Keung, Man Y MY; Wu, Yanyuan Y; Vadgama, Jaydutt V JV

Publication Date: 2023-02

Variant appearance in text: TG: 340A>G; T114A

PubMed Link: 36644153

Variant Present in the following documents:

• Supplementary_Data5.xlsx, sheet 2

View BVdb publication page

---

Genomic evolution towards azole resistance in Candida glabrata clinical isolates unveils the importance of CgHxt4/6/7 in azole accumulation.

Communications Biology

Galocha, Mónica M; Viana, Romeu R; Pais, Pedro P; Silva-Dias, Ana A; Cavalheiro, Mafalda M; Miranda, Isabel M IM; Van Ende, Mieke M; Souza, Caio S CS; Costa, Catarina C; Branco, Joana J; Soares, Cláudio M CM; Van Dijck, Patrick P; Rodrigues, Acácio G AG; Teixeira, Miguel C MC

Publication Date: 2022-10-21

Variant appearance in text: TG: 340A>G

PubMed Link: 36271293

Variant Present in the following documents:

• 42003_2022_4087_MOESM4_ESM.xlsx, sheet 4
• 42003_2022_4087_MOESM4_ESM.xlsx, sheet 3

View BVdb publication page

---

The Mitochondrial tRNAPhe 625G>A Mutation in Three Han Chinese Families With Cholecystolithiasis.

Frontiers In Genetics

Hou, Lingling L; Hu, Cuifang C; Ji, Lili L; Wang, Qiongdan Q; Liang, Min M

Publication Date: 2022

Variant appearance in text: TG: T114A

PubMed Link: 35719381

Variant Present in the following documents:

• Main text
• fgene-13-814729.pdf

View BVdb publication page

---

A genome on shaky ground: exploring the impact of mitochondrial DNA integrity on Parkinson's disease by highlighting the use of cybrid models.

Cellular And Molecular Life Sciences : Cmls

Lang, Martin M; Grünewald, Anne A; Pramstaller, Peter P PP; Hicks, Andrew A AA; Pichler, Irene I

Publication Date: 2022-05-05

Variant appearance in text: TG: T114A

PubMed Link: 35513611

Variant Present in the following documents:

• 18_2022_Article_4304.pdf

View BVdb publication page

---

HDAC2 Facilitates Pancreatic Cancer Metastasis.

Cancer Research

Krauß, Lukas L; Urban, Bettina C BC; Hastreiter, Sieglinde S; Schneider, Carolin C; Wenzel, Patrick P; Hassan, Zonera Z; Wirth, Matthias M; Lankes, Katharina K; Terrasi, Andrea A; Klement, Christine C; Cernilogar, Filippo M FM; Öllinger, Rupert R; de Andrade Krätzig, Niklas N; Engleitner, Thomas T; Schmid, Roland M RM; Steiger, Katja K; Rad, Roland R; Krämer, Oliver H OH; Reichert, Maximilian M; Schotta, Gunnar G; Saur, Dieter D; Schneider, Günter G

Publication Date: 2022-02-15

Variant appearance in text: TG: 340A>G

PubMed Link: 34903606

Variant Present in the following documents:

• can-20-3209_supplementary_table_3_suppst3.xlsx, sheet 2

View BVdb publication page

---

Multiscale heterogeneity in gastric adenocarcinoma evolution is an obstacle to precision medicine.

Genome Medicine

Röcken, Christoph C; Amallraja, Anu A; Halske, Christine C; Opasic, Luka L; Traulsen, Arne A; Behrens, Hans-Michael HM; Krüger, Sandra S; Liu, Anne A; Haag, Jochen J; Egberts, Jan-Hendrik JH; Rosenstiel, Philip P; Meißner, Tobias T

Publication Date: 2021-11-08

Variant appearance in text: TG: T114A

PubMed Link: 34749812

Variant Present in the following documents:

• 13073_2021_975_MOESM2_ESM.xlsx, sheet 12

View BVdb publication page

---

Genomic stability at the coding regions of the multidrug transporter gene ABCB1: insights into the development of alternative drug resistance mechanisms in human leukemia cells.

Cancer Drug Resistance (Alhambra, Calif.)

Chen, Kevin G KG; Duran, George E GE; Mogul, Mark J MJ; Wang, Yan C YC; Ross, Kevin L KL; Jaffrézou, Jean-Pierre JP; Huff, Lyn M LM; Johnson, Kory R KR; Fojo, Tito T; Lacayo, Norman J NJ; Sikic, Branimir I BI

Publication Date: 2020

Variant appearance in text: TG: 340A>G

PubMed Link: 34541464

Variant Present in the following documents:

• cdr-3-959-SupplementaryMaterials.xlsx, sheet 5

View BVdb publication page

---

K-Ras-Activated Cells Can Develop into Lung Tumors When Runx3-Mediated Tumor Suppressor Pathways Are Abrogated.

Molecules And Cells

Lee, You-Soub YS; Lee, Ja-Yeol JY; Song, Soo-Hyun SH; Kim, Da-Mi DM; Lee, Jung-Won JW; Chi, Xin-Zi XZ; Ito, Yoshiaki Y; Bae, Suk-Chul SC

Publication Date: 2020-10-31

Variant appearance in text: TG: 340A>G

PubMed Link: 33115981

Variant Present in the following documents:

• molce-43-889_Supple.xlsx, sheet 1

View BVdb publication page

---

Mitochondrial DNA mutations in Malaysian female breast cancer patients.

Plos One

Omasanggar, Raevathi R; Yu, Choo Yee CY; Ang, Geik Yong GY; Emran, Nor Aina NA; Kitan, Normayah N; Baghawi, Anita A; Falparado Ahmad, Atiki A; Abdullah, Maizaton Atmadini MA; Teh, Lay Kek LK; Maniam, Sandra S

Publication Date: 2020

Variant appearance in text: TG: T114A

PubMed Link: 32442190

Variant Present in the following documents:

• pone.0233461.s003.xlsx, sheet 1

View BVdb publication page

---

Mitochondrial tRNAAla 5601C>T variant may affect the clinical expression of the LHON‑related ND4 11778G>A mutation in a family.

Molecular Medicine Reports

Ding, Yu Y; Ye, Yu-Feng YF; Li, Mei-Ya MY; Xia, Bo-Hou BH; Leng, Jian-Hang JH

Publication Date: 2020-01

Variant appearance in text: TG: T114A

PubMed Link: 31939618

Variant Present in the following documents:

• mmr-21-01-0201.pdf

View BVdb publication page

---

YAP1 mediates survival of ALK-rearranged lung cancer cells treated with alectinib via pro-apoptotic protein regulation.

Nature Communications

Tsuji, Takahiro T; Ozasa, Hiroaki H; Aoki, Wataru W; Aburaya, Shunsuke S; Yamamoto Funazo, Tomoko T; Furugaki, Koh K; Yoshimura, Yasushi Y; Yamazoe, Masatoshi M; Ajimizu, Hitomi H; Yasuda, Yuto Y; Nomizo, Takashi T; Yoshida, Hironori H; Sakamori, Yuichi Y; Wake, Hiroaki H; Ueda, Mitsuyoshi M; Kim, Young Hak YH; Hirai, Toyohiro T

Publication Date: 2020-01-03

Variant appearance in text: TG: T114A

PubMed Link: 31900393

Variant Present in the following documents:

• 41467_2019_13771_MOESM5_ESM.xlsx, sheet 1

View BVdb publication page

---

The role of myoglobin in epithelial cancers: Insights from transcriptomics.

International Journal Of Molecular Medicine

Bicker, Anne A; Nauth, Theresa T; Gerst, Daniela D; Aboouf, Mostafa Ahmed MA; Fandrey, Joachim J; Kristiansen, Glen G; Gorr, Thomas Alexander TA; Hankeln, Thomas T

Publication Date: 2020-02

Variant appearance in text: TG: Thr114Ala

PubMed Link: 31894249

Variant Present in the following documents:

• Supplementary_Data2.xlsx, sheet 7

View BVdb publication page

---

Schizophrenia-associated mt-DNA SNPs exhibit highly variable haplogroup affiliation and nuclear ancestry: Bi-genomic dependence raises major concerns for link to disease.

Plos One

Hagen, Christian M CM; Gonçalves, Vanessa F VF; Hedley, Paula L PL; Bybjerg-Grauholm, Jonas J; Bækvad-Hansen, Marie M; Hansen, Christine S CS; Kanters, Jørgen K JK; Nielsen, Jimmi J; Mors, Ole O; Demur, Alfonso B AB; Als, Thomas D TD; Nordentoft, Merete M; Børglum, Anders A; Mortensen, Preben B PB; Kennedy, James J; Werge, Thomas M TM; Hougaard, David M DM; Christiansen, Michael M

Publication Date: 2018

Variant appearance in text: TG: T114A

PubMed Link: 30532134

Variant Present in the following documents:

• pone.0208828.pdf

View BVdb publication page

---

Mitochondrial 10398A>G NADH-Dehydrogenase Subunit 3 of Complex I Is Frequently Altered in Intra-Axial Brain Tumors in Malaysia.

Brain Tumor Research And Treatment

Mohamed Yusoff, Abdul Aziz AA; Zulfakhar, Fatin Najwa FN; Mohd Khair, Siti Zulaikha Nashwa SZN; Wan Abdullah, Wan Salihah WS; Abdullah, Jafri Malin JM; Idris, Zamzuri Z

Publication Date: 2018-04

Variant appearance in text: TG: T114A

PubMed Link: 29717568

Variant Present in the following documents:

• btrt-6-31.pdf

View BVdb publication page

---

Molecular determinants of permeation in a fluoride-specific ion channel.

Elife

Last, Nicholas B NB; Sun, Senmiao S; Pham, Minh C MC; Miller, Christopher C

Publication Date: 2017-09-27

Variant appearance in text: TG: T114A

PubMed Link: 28952925

Variant Present in the following documents:

• elife-31259.pdf

View BVdb publication page

---

Whole-Genome Resequencing Identifies the Molecular Genetic Cause for the Absence of a Gy5 Glycinin Protein in Soybean PI 603408.

G3 (Bethesda, Md.)

Gillman, Jason D JD; Kim, Won-Seok WS; Song, Bo B; Oehrle, Nathan W NW; Tawari, Nilesh R NR; Liu, Shanshan S; Krishnan, Hari B HB

Publication Date: 2017-07-05

Variant appearance in text: TG: Thr114Ala

PubMed Link: 28592556

Variant Present in the following documents:

• 2345FileS1.xlsx, sheet 1

View BVdb publication page

---

Landscape of genomic diversity and host adaptation in Fusarium graminearum.

Bmc Genomics

Laurent, Benoit B; Moinard, Magalie M; Spataro, Cathy C; Ponts, Nadia N; Barreau, Christian C; Foulongne-Oriol, Marie M

Publication Date: 2017-02-23

Variant appearance in text: TG: 340A>G

PubMed Link: 28231761

Variant Present in the following documents:

• 12864_2017_3524_MOESM3_ESM.xlsx, sheet 2

View BVdb publication page

---

Variant discovery in the sheep milk transcriptome using RNA sequencing.

Bmc Genomics

Suárez-Vega, Aroa A; Gutiérrez-Gil, Beatriz B; Klopp, Christophe C; Tosser-Klopp, Gwenola G; Arranz, Juan José JJ

Publication Date: 2017-02-15

Variant appearance in text: TG: 340A>G

PubMed Link: 28202015

Variant Present in the following documents:

• 12864_2017_3581_MOESM1_ESM.xlsx, sheet 1

View BVdb publication page

---

Association of a Human FABP1 Gene Promoter Region Polymorphism with Altered Serum Triglyceride Levels.

Plos One

Peng, Xian-E XE; Wu, Yun-Li YL; Zhu, Yi-Bing YB; Huang, Rong-Dong RD; Lu, Qing-Qing QQ; Lin, Xu X

Publication Date: 2015

Variant appearance in text: TG: 340A>G

PubMed Link: 26439934

Variant Present in the following documents:

• Main text
• pone.0139417.pdf

View BVdb publication page

---

The identification of mitochondrial DNA variants in glioblastoma multiforme.

Acta Neuropathologica Communications

Yeung, Ka Yu KY; Dickinson, Adam A; Donoghue, Jacqueline F JF; Polekhina, Galina G; White, Stefan J SJ; Grammatopoulos, Dimitris K DK; McKenzie, Matthew M; Johns, Terrance G TG; St John, Justin C JC

Publication Date: 2014-01-02

Variant appearance in text: TG: T114A

PubMed Link: 24383468

Variant Present in the following documents:

• 2051-5960-2-1.pdf

View BVdb publication page

---

The mitochondrial DNA Northeast Asia CZD haplogroup is associated with good disease-free survival among male oral squamous cell carcinoma patients.

Plos One

Lai, Chih-Hsiung CH; Huang, Shiang-Fu SF; Chen, I-How IH; Liao, Chun-Ta CT; Wang, Hung-Ming HM; Hsieh, Ling-Ling LL

Publication Date: 2012

Variant appearance in text: TG: T114A

PubMed Link: 23185408

Variant Present in the following documents:

• pone.0049684.pdf

View BVdb publication page

---

Mutation rate switch inside Eurasian mitochondrial haplogroups: impact of selection and consequences for dating settlement in Europe.

Plos One

Pierron, Denis D; Chang, Ivan I; Arachiche, Amal A; Heiske, Margit M; Thomas, Olivier O; Borlin, Marine M; Pennarun, Erwan E; Murail, Pacal P; Thoraval, Didier D; Rocher, Christophe C; Letellier, Thierry T

Publication Date: 2011

Variant appearance in text: TG: T114A

PubMed Link: 21738700

Variant Present in the following documents:

• pone.0021543.pdf

View BVdb publication page

---

Mitochondrial DNA sequence variation and haplogroup distribution in Chinese patients with LHON and m.14484T>C.

Plos One

Yu, Dandan D; Jia, Xiaoyun X; Zhang, A-Mei AM; Li, Shiqiang S; Zou, Yang Y; Zhang, Qingjiong Q; Yao, Yong-Gang YG

Publication Date: 2010-10-18

Variant appearance in text: TG: T114A

PubMed Link: 20976138

Variant Present in the following documents:

• pone.0013426.pdf

View BVdb publication page

---

Mitochondrial tRNAThr G15927A mutation may modulate the phenotypic manifestation of ototoxic 12S rRNA A1555G mutation in four Chinese families.

Pharmacogenetics And Genomics

Wang, Xinjian X; Lu, Jianxin J; Zhu, Yi Y; Yang, Aifen A; Yang, Li L; Li, Ronghua R; Chen, Bobei B; Qian, Yaping Y; Tang, Xiaowen X; Wang, Jindan J; Zhang, Xue X; Guan, Min-Xin MX

Publication Date: 2008-12

Variant appearance in text: TG: T114A

PubMed Link: 18820594

Variant Present in the following documents:

• Main text

View BVdb publication page

---

Identification of mitochondrial DNA polymorphisms that alter mitochondrial matrix pH and intracellular calcium dynamics.

Plos Genetics

Kazuno, An-a AA; Munakata, Kae K; Nagai, Takeharu T; Shimozono, Satoshi S; Tanaka, Masashi M; Yoneda, Makoto M; Kato, Nobumasa N; Miyawaki, Atsushi A; Kato, Tadafumi T

Publication Date: 2006-08

Variant appearance in text: TG: T114A

PubMed Link: 16895436

Variant Present in the following documents:

• pgen.0020128.pdf

View BVdb publication page

---