Publications:

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Whole-exome Sequencing of Nigerian Prostate Tumors from the Prostate Cancer Transatlantic Consortium (CaPTC) Reveals DNA Repair Genes Associated with African Ancestry.

Cancer Research Communications

White, Jason A JA; Kaninjing, Ernest T ET; Adeniji, Kayode A KA; Jibrin, Paul P; Obafunwa, John O JO; Ogo, Chidiebere N CN; Mohammed, Faruk F; Popoola, Ademola A; Fatiregun, Omolara A OA; Oluwole, Olabode P OP; Karanam, Balasubramanyam B; Elhussin, Isra I; Ambs, Stefan S; Tang, Wei W; Davis, Melissa M; Polak, Paz P; Campbell, Moray J MJ; Brignole, Kathryn R KR; Rotimi, Solomon O SO; Dean-Colomb, Windy W; Odedina, Folake T FT; Martin, Damali N DN; Yates, Clayton C

Publication Date: 2022-09

Variant appearance in text: HR: Leu54Phe

PubMed Link: 36922933

Variant Present in the following documents:

• crc-22-0136.pdf

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Using In Silico Bioinformatics Algorithms for the Accurate Prediction of the Impact of Spike Protein Mutations on the Pathogenicity, Stability, and Functionality of the SARS-CoV-2 Virus and Analysis of Potential Therapeutic Targets.

Biochemical Genetics

Alizadehmohajer, Negin N; Zahedifar, Shahrzad S; Sohrabi, Ehsan E; Shaddel Basir, Sedighe S; Nourigheimasi, Shima S; Falak, Reza R; Nedaeinia, Reza R; A Ferns, Gordon G; Emami Nejad, Asieh A; Manian, Mostafa M

Publication Date: 2022-09-29

Variant appearance in text: HR: L54F

PubMed Link: 36173498

Variant Present in the following documents:

• 10528_2022_Article_10282.pdf

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COVID-19: comprehensive review on mutations and current vaccines.

Archives Of Microbiology

Hebbani, Ananda Vardhan AV; Pulakuntla, Swetha S; Pannuru, Padmavathi P; Aramgam, Sreelatha S; Badri, Kameswara Rao KR; Reddy, Vaddi Damodara VD

Publication Date: 2021-12-06

Variant appearance in text: HR: L54F

PubMed Link: 34873656

Variant Present in the following documents:

• 203_2021_Article_2606.pdf

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Genomic Variations in the Structural Proteins of SARS-CoV-2 and Their Deleterious Impact on Pathogenesis: A Comparative Genomics Approach.

Frontiers In Cellular And Infection Microbiology

Mohammad, Taj T; Choudhury, Arunabh A; Habib, Insan I; Asrani, Purva P; Mathur, Yash Y; Umair, Mohd M; Anjum, Farah F; Shafie, Alaa A; Yadav, Dharmendra Kumar DK; Hassan, Md Imtaiyaz MI

Publication Date: 2021

Variant appearance in text: HR: L54F

PubMed Link: 34722346

Variant Present in the following documents:

• Main text
• fcimb-11-765039.pdf

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Trajectory of Growth of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants in Houston, Texas, January through May 2021, Based on 12,476 Genome Sequences.

The American Journal Of Pathology

Olsen, Randall J RJ; Christensen, Paul A PA; Long, S Wesley SW; Subedi, Sishir S; Hodjat, Parsa P; Olson, Robert R; Nguyen, Marcus M; Davis, James J JJ; Yerramilli, Prasanti P; Saavedra, Matthew O MO; Pruitt, Layne L; Reppond, Kristina K; Shyer, Madison N MN; Cambric, Jessica J; Gadd, Ryan R; Thakur, Rashi M RM; Batajoo, Akanksha A; Finkelstein, Ilya J IJ; Gollihar, Jimmy J; Musser, James M JM

Publication Date: 2021-10

Variant appearance in text: HR: L54F

PubMed Link: 34303698

Variant Present in the following documents:

• main.pdf

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SARS-CoV-2 genomics: An Indian perspective on sequencing viral variants.

Journal Of Biosciences

Srivastava, Surabhi S; Banu, Sofia S; Singh, Priya P; Sowpati, Divya Tej DT; Mishra, Rakesh K RK

Publication Date: 2021

Variant appearance in text: HR: L54F

PubMed Link: 33737495

Variant Present in the following documents:

• 12038_2021_Article_145.pdf

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Characterizing genomic variants and mutations in SARS-CoV-2 proteins from Indian isolates.

Gene Reports

Das, Jayanta Kumar JK; Sengupta, Antara A; Choudhury, Pabitra Pal PP; Roy, Swarup S

Publication Date: 2021-12

Variant appearance in text: HR: L54F

PubMed Link: 33623833

Variant Present in the following documents:

• Main text
• main.pdf

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Mutations in SARS-CoV-2 Leading to Antigenic Variations in Spike Protein: A Challenge in Vaccine Development.

Journal Of Laboratory Physicians

Singh, Praveen Kumar PK; Kulsum, Umay U; Rufai, Syed Beenish SB; Mudliar, S Rashmi SR; Singh, Sarman S

Publication Date: 2020-08

Variant appearance in text: HR: L54F

PubMed Link: 32884216

Variant Present in the following documents:

• Main text
• 10-1055-s-0040-1715790.pdf

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Exploring the genomic and proteomic variations of SARS-CoV-2 spike glycoprotein: A computational biology approach.

Infection, Genetics And Evolution : Journal Of Molecular Epidemiology And Evolutionary Genetics In Infectious Diseases

Lokman, Syed Mohammad SM; Rasheduzzaman, Md M; Salauddin, Asma A; Barua, Rocktim R; Tanzina, Afsana Yeasmin AY; Rumi, Meheadi Hasan MH; Hossain, Md Imran MI; Siddiki, A M A M Zonaed AMAMZ; Mannan, Adnan A; Hasan, Md Mahbub MM

Publication Date: 2020-10

Variant appearance in text: HR: L54F

PubMed Link: 32502733

Variant Present in the following documents:

• Main text
• main.pdf

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The integrity of a cholesterol-binding pocket in Niemann-Pick C2 protein is necessary to control lysosome cholesterol levels.

Proceedings Of The National Academy Of Sciences Of The United States Of America

Ko, Dennis C DC; Binkley, Jonathan J; Sidow, Arend A; Scott, Matthew P MP

Publication Date: 2003-03-04

Variant appearance in text: HR: L54F

PubMed Link: 12591949

Variant Present in the following documents:

• Main text

View BVdb publication page

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