PMID: 17903298

Genome-wide association with diabetes-related traits in the Framingham Heart Study.

BMC medical genetics
JB Meigs, AK Manning, CS Fox, JC Florez, C Liu, LA Cupples, J Dupuis
2007-09-19

81 variants were identified in this publication


Variant ID Gene cDNA Protein Consequence Exon Intron
1-95338091-A-G SLC44A3 c.1338+5118A>G - IntronicSNV - 11/13
3-143055707-G-A SLC9A9 c.1604+26619C>T - IntronicSNV - 14/15
7-29184489-C-T CPVL c.-11+1468G>A - intron_variant - 1/12
2-107465840-C-A ST6GAL2 c.1-5407G>T - IntronicSNV - 1/5
12-114351555-T-C RBM19 c.2558+1219A>G - IntronicSNV - 21/23
5-122528772-G-A PRDM6 c.*5877G>A - IntergenicSNV 8/8 -
3-12388563-A-C PPARG c.1-32642A>C - IntronicSNV - 1/6
11-17440473-A-G ABCC8 c.2223-1964T>C - IntronicSNV - 16/38
11-17440473-A-T ABCC8 c.2223-1964T>A - IntronicSNV - 16/38
3-12527242-C-T TSEN2 c.-18+863C>T - intron_variant - 1/11
5-119962576-A-T PRR16 c.91-59073A>T - IntronicSNV - 2/2
11-17418477-C-A ABCC8 c.4105G>T p.Ala1369Ser Missense 33/39 -
3-12462024-G-A PPARG c.1186+3371G>A - IntronicSNV - 6/6
3-12346962-G-C PPARG c.-3+17443G>C - intron_variant - 1/6
11-17440990-G-C ABCC8 c.2223-2481C>G - IntronicSNV - 16/38
3-12530413-T-C TSEN2 c.1-887T>C - IntronicSNV - 1/11
7-122838090-G-C SLC13A1 c.99+1812C>G - IntronicSNV - 1/14
5-145380097-A-G SH3RF2 c.648+207A>G - IntronicSNV - 3/9
7-122836025-G-C SLC13A1 c.99+3877C>G - IntronicSNV - 1/14
2-80415402-C-A CTNNA2 c.1057-204934C>A - IntronicSNV - 7/17
3-12377294-C-G PPARG c.1-43911C>G - IntronicSNV - 1/6
19-48748003-C-G CARD8 c.1-3726G>C - IntronicSNV - 3/12
2-239416-C-T SH3YL1 c.292-5144G>A - IntronicSNV - 4/9
3-12346962-G-A PPARG c.-3+17443G>A - intron_variant - 1/6
11-17440990-G-T ABCC8 c.2223-2481C>A - IntronicSNV - 16/38
5-119962576-A-G PRR16 c.91-59073A>G - IntronicSNV - 2/2
7-50093078-C-T ZPBP c.487+4507G>A - IntronicSNV - 4/7
11-17489445-C-T ABCC8 c.412+2203G>A - IntronicSNV - 3/38
11-17473146-G-A ABCC8 c.1176+1520C>T - IntronicSNV - 7/38
11-17533635-G-T USH1C c.1284+5313C>A - IntronicSNV - 15/20
3-12426936-G-T PPARG c.396+3946G>T - IntronicSNV - 3/6
3-12426936-G-A PPARG c.396+3946G>A - IntronicSNV - 3/6
18-60544351-T-C PHLPP1 c.2066+16517T>C - IntronicSNV - 4/16
11-17533635-G-A USH1C c.1284+5313C>T - IntronicSNV - 15/20
2-109489365-A-G CCDC138 c.1694-542A>G - IntronicSNV - 13/14
12-79454982-C-T SYT1 c.-18+13840C>T - intron_variant - 3/10
9-125003679-G-A RBM18 c.*484C>T - 3-UTRSNV 6/6 -
10-114796048-A-G TCF7L2 c.382-3736A>G - IntronicSNV - 3/13
13-96216903-A-G CLDN10 c.464+4186A>G - IntronicSNV - 3/4
3-12346849-G-A PPARG c.-3+17330G>A - intron_variant - 1/6
3-12437237-C-G PPARG c.535+2986C>G - IntronicSNV - 4/6
2-109489365-A-T CCDC138 c.1694-542A>T - IntronicSNV - 13/14
3-131730242-G-A CPNE4 c.-2+23169C>T - intron_variant - 1/15
9-125023705-C-T RBM18 c.67G>A p.Glu23Lys Missense 2/6 -
2-192914362-C-A TMEFF2 c.536+8043G>T - IntronicSNV - 5/9
10-114915214-G-T TCF7L2 c.1201-2566G>T - IntronicSNV - 10/13
10-114913559-A-T TCF7L2 c.1200+1360A>T - IntronicSNV - 10/13
10-114914913-T-G TCF7L2 c.1200+2714T>G - IntronicSNV - 10/13
19-48748003-C-A CARD8 c.1-3726G>T - IntronicSNV - 3/12
10-112419189-A-G RBM20 c.191+14786A>G - IntronicSNV - 1/13
3-12434608-G-T PPARG c.535+357G>T - IntronicSNV - 4/6
4-102092995-G-A PPP3CA c.259+24078C>T - IntronicSNV - 2/13
16-7454496-G-A RBFOX1 c.87+71407G>A - IntronicSNV - 1/12
3-76132564-C-T ROBO2 c.109+145811C>T - IntronicSNV - 2/26
3-12434608-G-A PPARG c.535+357G>A - IntronicSNV - 4/6
3-12530184-G-T TSEN2 c.1-1116G>T - IntronicSNV - 1/11
11-17522086-C-T USH1C c.1480+512G>A - IntronicSNV - 18/20
1-66691885-C-G PDE4B c.282-21258C>G - IntronicSNV - 3/16
3-12530184-G-A TSEN2 c.1-1116G>A - IntronicSNV - 1/11
7-50093078-C-G ZPBP c.487+4507G>C - IntronicSNV - 4/7
8-28823095-A-G HMBOX1 c.23+1688A>G - IntronicSNV - 3/10
5-119974750-G-A PRR16 c.91-46899G>A - IntronicSNV - 2/2
5-119974750-G-C PRR16 c.91-46899G>C - IntronicSNV - 2/2
1-66691885-C-T PDE4B c.282-21258C>T - IntronicSNV - 3/16
3-189515503-G-A TP63 c.325-10558G>A - IntronicSNV - 3/13
3-76121506-T-C ROBO2 c.109+134753T>C - IntronicSNV - 2/26
10-114732882-T-C TCF7L2 c.381+21516T>C - IntronicSNV - 3/13
16-68960982-T-C TANGO6 c.2128-489T>C - IntronicSNV - 12/17
4-96368305-A-T UNC5C c.124+101580T>A - IntronicSNV - 1/15
3-71590347-C-T FOXP1 c.-298+40353G>A - intron_variant - 2/20
3-12394840-C-T PPARG c.1-26365C>T - IntronicSNV - 1/6
3-12346738-A-C PPARG c.-3+17219A>C - intron_variant - 1/6
2-86404411-A-G IMMT c.309+2145T>C - IntronicSNV - 3/14
1-213037661-G-T FLVCR1 c.883+450G>T - IntronicSNV - 2/9
5-145426248-T-C SH3RF2 c.1060-1087T>C - IntronicSNV - 5/9
2-192914362-C-T TMEFF2 c.536+8043G>A - IntronicSNV - 5/9
8-40484239-T-C ZMAT4 c.578-45459A>G - IntronicSNV - 5/6
5-114942711-A-G TMED7-TICAM2 c.566+9304T>C - IntronicSNV - 3/3
1-210836847-T-C HHAT c.1391-10783T>C - IntronicSNV - 11/11
5-122496931-T-C PRDM6 c.1153+1599T>C - IntronicSNV - 5/7
3-12434901-C-T PPARG c.535+650C>T - IntronicSNV - 4/6