PMID: 21303902

Dense genotyping of candidate gene loci identifies variants associated with high-density lipoprotein cholesterol.

Circulation. Cardiovascular genetics
AC Edmondson, PS Braund, IM Stylianou, AV Khera, CP Nelson, ML Wolfe, SL Derohannessian, BJ Keating, L Qu, J He, MD Tobin, M Tomaszewski, J Baumert, N Klopp, A Döring, B Thorand, M Li, MP Reilly, W Koenig, NJ Samani, DJ Rader
2011-04

534 variants were identified in this publication


Variant ID Gene cDNA Protein Consequence Exon Intron
4-103497785-G-A NFKB1 c.408-248G>A - IntronicSNV - 6/23
9-78620706-C-G PCSK5 c.412-17948C>G - IntronicSNV - 3/36
9-107668064-G-C ABCA1 c.1-2104C>G - IntronicSNV - 1/49
16-57009376-T-A CETP c.981+313T>A - IntronicSNV - 10/15
16-56999949-A-G CETP c.233+2913A>G - IntronicSNV - 2/15
7-95051998-A-C PON2 c.145+1829T>G - IntronicSNV - 2/8
15-58812199-C-T LIPC c.89-18333C>T - IntronicSNV - 1/8
9-107679500-C-A ABCA1 c.-93+10716G>T - intron_variant - 1/49
10-17127191-A-G CUBN c.2110+405T>C - IntronicSNV - 16/66
8-19819077-T-A LPL c.1322+483T>A - IntronicSNV - 8/9
15-58724792-T-A LIPC c.88+473T>A - IntronicSNV - 1/8
8-19818436-C-T LPL c.1164C>T p.Thr388Thr Synonymous 8/10 -
8-19818436-C-A LPL c.1164C>A p.Thr388Thr Synonymous 8/10 -
9-78511363-T-C PCSK5 c.192+5074T>C - IntronicSNV - 1/36
17-76377482-T-G PGS1 c.143+2593T>G - IntronicSNV - 1/9
15-58741384-C-G LIPC c.88+17065C>G - IntronicSNV - 1/8
9-137328442-G-A RXRA c.1371G>A p.Ala457Ala Synonymous 10/10 -
10-108798092-A-G SORCS1 c.559-81754T>C - IntronicSNV - 1/25
10-108754749-C-T SORCS1 c.559-38411G>A - IntronicSNV - 1/25
2-21237544-G-T APOB c.3697-79C>A - IntronicSNV - 23/28
2-165540800-T-C COBLL1 c.*1656A>G - 3-UTRSNV 14/14 -
11-116728630-G-C SIK3 c.3407C>G - missense_variant 20/24 -
2-165548569-G-T COBLL1 c.3414+162C>A - IntronicSNV - 13/13
15-58752607-C-T LIPC c.88+28288C>T - IntronicSNV - 1/8
15-58752607-C-G LIPC c.88+28288C>G - IntronicSNV - 1/8
9-107661150-C-A ABCA1 c.66+4745G>T - IntronicSNV - 2/49
2-169802252-G-T ABCB11 c.2344-781C>A - IntronicSNV - 19/27
9-104362937-A-G GRIN3A c.2766+12721T>C - IntronicSNV - 6/8
20-44538427-T-C PLTP c.330-117A>G - IntronicSNV - 4/15
15-58802026-A-C LIPC c.89-28506A>C - IntronicSNV - 1/8
12-125283521-C-G SCARB1 c.1128+1149G>C - IntronicSNV - 8/12
12-109895168-C-G KCTD10 c.527+267G>C - IntronicSNV - 5/6
11-61604814-C-A FADS2 c.208-436C>A - IntronicSNV - 1/11
12-125269799-C-G SCARB1 c.1401+1104G>C - IntronicSNV - 11/12
8-19812252-G-C LPL c.775+388G>C - IntronicSNV - 5/9
8-19812252-G-A LPL c.775+388G>A - IntronicSNV - 5/9
8-19812252-G-T LPL c.775+388G>T - IntronicSNV - 5/9
15-58731567-A-G LIPC c.88+7248A>G - IntronicSNV - 1/8
6-35362848-T-C PPARD c.1-16017T>C - IntronicSNV - 2/7
16-56996211-G-A CETP c.118+202G>A - IntronicSNV - 1/15
22-46630634-G-C PPARA c.1160-396G>C - IntronicSNV - 7/7
1-200018851-G-A NR5A2 c.894+905G>A - IntronicSNV - 4/6
15-58829215-A-T LIPC c.89-1317A>T - IntronicSNV - 1/8
16-57017319-G-A CETP c.1403G>A p.Arg468Gln Missense 15/16 -
8-19820405-G-A LPL c.1427+675G>A - IntronicSNV - 9/9
11-61604782-A-T FADS2 c.208-468A>T - IntronicSNV - 1/11
12-121435427-G-A HNF1A c.1460G>A p.Ser487Asn Missense 7/10 -
12-123186596-C-A HCAR2 c.*143G>T - 3-UTRSNV 1/1 -
7-95025602-A-G PON3 c.61T>C p.Phe21Leu Missense 1/9 -
9-107662494-G-A ABCA1 c.66+3401C>T - IntronicSNV - 2/49
9-78644071-C-T PCSK5 c.632+2118C>T - IntronicSNV - 5/36
2-44103237-T-C ABCG8 c.1756+685T>C - IntronicSNV - 11/12
2-44103237-T-G ABCG8 c.1756+685T>G - IntronicSNV - 11/12
8-19813529-A-G LPL c.953A>G p.Asn318Ser Missense 6/10 -
8-19824045-C-A LPL c.*1224C>A - 3-UTRSNV 10/10 -
16-57006590-C-G CETP c.750+595C>G - IntronicSNV - 8/15
16-57006590-C-T CETP c.750+595C>T - IntronicSNV - 8/15
9-107658910-C-T ABCA1 c.66+6985G>A - IntronicSNV - 2/49
9-107661150-C-T ABCA1 c.66+4745G>A - IntronicSNV - 2/49
15-58754497-G-T LIPC c.88+30178G>T - IntronicSNV - 1/8
8-19799641-G-A LPL c.88+2602G>A - IntronicSNV - 1/9
12-110031051-C-T MVK c.886-1782C>T - IntronicSNV - 9/10
9-107650843-C-T ABCA1 c.160+540G>A - IntronicSNV - 3/49
1-161200487-C-G NR1I3 c.932+116G>C - IntronicSNV - 8/8
1-161200487-C-A NR1I3 c.932+116G>T - IntronicSNV - 8/8
15-58798706-A-G LIPC c.89-31826A>G - IntronicSNV - 1/8
2-169809672-G-T ABCB11 c.2343+4802C>A - IntronicSNV - 19/27
2-242176188-G-C HDLBP c.2750-4C>G - IntronicSNV - 20/27
16-57007353-C-T CETP c.861C>T p.Phe287Phe Synonymous 9/16 -
2-169802252-G-A ABCB11 c.2344-781C>T - IntronicSNV - 19/27
7-95025600-G-T PON3 c.63C>A p.Phe21Leu Missense 1/9 -
15-58825713-T-A LIPC c.89-4819T>A - IntronicSNV - 1/8
9-107684405-G-A ABCA1 c.-93+5811C>T - intron_variant - 1/49
18-47118398-T-C LIPG c.*1506T>C - 3-UTRSNV 10/10 -
9-107687193-A-C ABCA1 c.-93+3023T>G - intron_variant - 1/49
8-19813702-G-A LPL c.1018+108G>A - IntronicSNV - 6/9
8-19813702-G-T LPL c.1018+108G>T - IntronicSNV - 6/9
16-67969930-A-G PSMB10 c.319T>C p.Leu107Leu Synonymous 4/8 -
16-67969930-A-T PSMB10 c.319T>A p.Leu107Ile Missense 4/8 -
7-80296054-C-T CD36 c.748+249C>T - IntronicSNV - 8/13
12-125283521-C-T SCARB1 c.1128+1149G>A - IntronicSNV - 8/12
8-19811006-T-C LPL c.541+74T>C - IntronicSNV - 4/9
22-46605190-T-C PPARA c.209-5880T>C - IntronicSNV - 3/7
20-62323006-G-C RTEL1 c.2629-89G>C - IntronicSNV - 27/34
8-19823963-C-T LPL c.*1142C>T - 3-UTRSNV 10/10 -
15-58829535-A-G LIPC c.89-997A>G - IntronicSNV - 1/8
9-107656122-A-C ABCA1 c.67-4646T>G - IntronicSNV - 2/49
9-107548493-G-T ABCA1 c.6401+86C>A - IntronicSNV - 48/49
16-57017002-T-G CETP c.1322-236T>G - IntronicSNV - 14/15
4-103535905-C-T NFKB1 c.2749+1167C>T - IntronicSNV - 23/23
11-116662331-G-T APOA5 c.132C>A p.Ile44Ile Synonymous 3/4 -
15-58754876-G-A LIPC c.88+30557G>A - IntronicSNV - 1/8
10-17009299-C-T CUBN c.4696-12752G>A - IntronicSNV - 31/66
9-107635869-C-G ABCA1 c.421+9451G>C - IntronicSNV - 5/49
2-21224853-C-T APOB c.13441G>A p.Ala4481Thr Missense 29/29 -
11-116691675-T-A APOA4 c.1099A>T p.Thr367Ser Missense 3/3 -
8-19815023-A-T LPL c.1018+1429A>T - IntronicSNV - 6/9
4-103475444-G-T NFKB1 c.259-12700G>T - IntronicSNV - 5/23
2-242186391-C-T HDLBP c.1818+80G>A - IntronicSNV - 15/27
16-57017662-G-A CETP c.*84G>A - 3-UTRSNV 16/16 -
2-21231524-G-A APOB c.8216C>T p.Pro2739Leu Missense 26/29 -
2-169883218-C-T ABCB11 c.-28+4517G>A - intron_variant - 1/27
11-46745003-C-T F2 c.494C>T p.Thr165Met Missense 6/14 -
11-61623140-C-A FADS2 c.745-1343C>A - IntronicSNV - 5/11
9-107658910-C-A ABCA1 c.66+6985G>T - IntronicSNV - 2/49
11-61623140-C-T FADS2 c.745-1343C>T - IntronicSNV - 5/11
2-21231524-G-T APOB c.8216C>A p.Pro2739Gln Missense 26/29 -
12-125317582-C-T SCARB1 c.127-15329G>A - IntronicSNV - 1/12
19-45448465-T-G APOC4 c.287T>G p.Leu96Arg Missense 3/3 -
2-21231524-G-C APOB c.8216C>G p.Pro2739Arg Missense 26/29 -
9-107604104-A-G ABCA1 c.814-1304T>C - IntronicSNV - 8/49
12-123200768-T-C HCAR3 c.517A>G p.Thr173Ala Missense 1/1 -
15-58743709-C-T LIPC c.88+19390C>T - IntronicSNV - 1/8
20-44536932-G-A PLTP c.486-389C>T - IntronicSNV - 5/15
15-58797300-G-A LIPC c.89-33232G>A - IntronicSNV - 1/8
9-78644071-C-A PCSK5 c.632+2118C>A - IntronicSNV - 5/36
12-123200768-T-G HCAR3 c.517A>C p.Thr173Pro Missense 1/1 -
16-57008227-G-A CETP c.931-786G>A - IntronicSNV - 9/15
8-19816934-T-C LPL c.1139+43T>C - IntronicSNV - 7/9
18-47099186-A-G LIPG c.572-2553A>G - IntronicSNV - 4/9
8-19815189-C-T LPL c.1019-1582C>T - IntronicSNV - 6/9
12-57533690-C-A LRP1 c.190+1326C>A - IntronicSNV - 2/88
22-46630634-G-T PPARA c.1160-396G>T - IntronicSNV - 7/7
16-56997233-G-A CETP c.233+197G>A - IntronicSNV - 2/15
15-102021219-G-C PCSK6 c.294+8360C>G - intron_variant - 2/22
7-95020305-A-G PON3 c.146-784T>C - IntronicSNV - 2/8
16-57007610-G-A CETP c.930+188G>A - IntronicSNV - 9/15
2-170154277-T-A LRP2 c.428-3057A>T - IntronicSNV - 4/78
16-57009388-G-T CETP c.981+325G>T - IntronicSNV - 10/15
16-57009388-G-A CETP c.981+325G>A - IntronicSNV - 10/15
2-170154277-T-C LRP2 c.428-3057A>G - IntronicSNV - 4/78
12-110033355-T-C MVK c.1039+369T>C - IntronicSNV - 10/10
3-12471862-G-A PPARG c.1187-3535G>A - IntronicSNV - 6/6
9-107648965-T-C ABCA1 c.161-2116A>G - IntronicSNV - 3/49
9-78641311-G-A PCSK5 c.556-566G>A - IntronicSNV - 4/36
12-57530670-T-C LRP1 c.68-1572T>C - IntronicSNV - 1/88
7-95025600-G-A PON3 c.63C>T p.Phe21Phe Synonymous 1/9 -
9-78675680-C-G PCSK5 c.633-7191C>G - IntronicSNV - 5/36
12-123796238-C-T SBNO1 c.3218-562G>A - IntronicSNV - 24/31
7-95025600-G-C PON3 c.63C>G p.Phe21Leu Missense 1/9 -
11-116722693-G-C SIK3 c.3512-2694C>G - intron_variant - 20/23
15-58731153-G-A LIPC c.88+6834G>A - IntronicSNV - 1/8
9-78581960-C-G PCSK5 c.298-19088C>G - IntronicSNV - 2/36
15-58731153-G-T LIPC c.88+6834G>T - IntronicSNV - 1/8
15-58731153-G-C LIPC c.88+6834G>C - IntronicSNV - 1/8
20-44533110-A-T PLTP c.942+329T>A - IntronicSNV - 10/15
15-58798813-T-C LIPC c.89-31719T>C - IntronicSNV - 1/8
15-58798813-T-A LIPC c.89-31719T>A - IntronicSNV - 1/8
4-103498455-T-C NFKB1 c.571+259T>C - IntronicSNV - 7/23
3-12396955-G-A PPARG c.1-24250G>A - IntronicSNV - 1/6
4-103519487-A-G NFKB1 c.1637+669A>G - IntronicSNV - 15/23
8-19809435-G-A LPL c.405G>A p.Val135Val Synonymous 3/10 -
2-169801488-A-G ABCB11 c.2344-17T>C - IntronicSNV - 19/27
9-78640399-T-G PCSK5 c.556-1478T>G - IntronicSNV - 4/36
16-57002404-C-A CETP c.234-894C>A - IntronicSNV - 2/15
15-58827623-G-A LIPC c.89-2909G>A - IntronicSNV - 1/8
10-108896564-G-A SORCS1 c.558+27163C>T - IntronicSNV - 1/25
9-107651212-T-C ABCA1 c.160+171A>G - IntronicSNV - 3/49
15-58769461-G-C LIPC c.88+45142G>C - IntronicSNV - 1/8
9-107588572-A-G ABCA1 c.2338-404T>C - IntronicSNV - 16/49
11-116619073-C-T BUD13 c.*125G>A - 3-UTRSNV 10/10 -
11-116619073-C-G BUD13 c.*125G>C - 3-UTRSNV 10/10 -
16-57007446-T-A CETP c.930+24T>A - IntronicSNV - 9/15
16-57007446-T-G CETP c.930+24T>G - IntronicSNV - 9/15
9-107625312-G-A ABCA1 c.422-1231C>T - IntronicSNV - 5/49
3-105238615-G-T ALCAM c.74-296G>T - IntronicSNV - 1/15
4-103525350-C-T NFKB1 c.1753-2303C>T - IntronicSNV - 16/23
9-137322710-T-A RXRA c.1044-1041T>A - IntronicSNV - 7/9
9-137322710-T-G RXRA c.1044-1041T>G - IntronicSNV - 7/9
4-103439425-C-T NFKB1 c.1-7251C>T - IntronicSNV - 1/23
9-78554102-G-C PCSK5 c.297+6703G>C - IntronicSNV - 2/36
9-78621725-C-T PCSK5 c.412-16929C>T - IntronicSNV - 3/36
12-125283766-C-T SCARB1 c.1128+904G>A - IntronicSNV - 8/12
6-35395618-C-A PPARD c.*1762C>A - 3-UTRSNV 8/8 -
6-35395618-C-T PPARD c.*1762C>T - 3-UTRSNV 8/8 -
15-58797499-C-T LIPC c.89-33033C>T - IntronicSNV - 1/8
4-103426339-T-C NFKB1 c.-8+3394T>C - intron_variant - 1/23
9-107570714-C-G ABCA1 c.4274+1033G>C - IntronicSNV - 30/49
22-46564686-G-C PPARA c.-43+16813G>C - intron_variant - 2/7
22-46564686-G-A PPARA c.-43+16813G>A - intron_variant - 2/7
15-101864596-A-G PCSK6 c.2374+459T>C - intron_variant - 18/22
16-56926195-G-A SLC12A3 c.2446+123G>A - IntronicSNV - 20/25
8-19803084-T-C LPL c.89-2607T>C - IntronicSNV - 1/9
4-103461107-A-G NFKB1 c.258+1994A>G - IntronicSNV - 5/23
15-101864596-A-T PCSK6 c.2374+459T>A - intron_variant - 18/22
9-107680915-A-G ABCA1 c.-93+9301T>C - intron_variant - 1/49
15-58802026-A-T LIPC c.89-28506A>T - IntronicSNV - 1/8
15-58818783-G-A LIPC c.89-11749G>A - IntronicSNV - 1/8
4-103531112-A-G NFKB1 c.2228-620A>G - IntronicSNV - 19/23
16-56996211-G-C CETP c.118+202G>C - IntronicSNV - 1/15
9-78657751-A-G PCSK5 c.632+15798A>G - IntronicSNV - 5/36
2-242194583-T-C HDLBP c.1081-10A>G - IntronicSNV - 8/27
9-78657751-A-T PCSK5 c.632+15798A>T - IntronicSNV - 5/36
2-242194583-T-A HDLBP c.1081-10A>T - IntronicSNV - 8/27
12-125338529-C-T SCARB1 c.126+9612G>A - IntronicSNV - 1/12
11-116726048-C-A SIK3 c.3511+2478G>T - intron_variant - 20/23
9-78590408-A-T PCSK5 c.298-10640A>T - IntronicSNV - 2/36
6-35378124-G-A PPARD c.1-741G>A - IntronicSNV - 2/7
7-95056939-T-C PON2 c.75-3042A>G - IntronicSNV - 1/8
6-35333741-G-C PPARD c.-102+18814G>C - intron_variant - 2/7
10-90764891-G-C FAS c.196+1940G>C - IntronicSNV - 2/8
10-90764891-G-A FAS c.196+1940G>A - IntronicSNV - 2/8
15-58798554-A-G LIPC c.89-31978A>G - IntronicSNV - 1/8
4-103450167-T-A NFKB1 c.40-826T>A - IntronicSNV - 2/23
15-58798554-A-T LIPC c.89-31978A>T - IntronicSNV - 1/8
15-58742418-G-A LIPC c.88+18099G>A - IntronicSNV - 1/8
11-61605215-A-G FADS2 c.208-35A>G - IntronicSNV - 1/11
15-58724524-A-G LIPC c.88+205A>G - IntronicSNV - 1/8
9-107669073-T-C ABCA1 c.1-3113A>G - IntronicSNV - 1/49
17-37810218-C-G STARD3 c.219+215C>G - IntronicSNV - 2/14
9-107684230-T-G ABCA1 c.-93+5986A>C - intron_variant - 1/49
6-32809848-G-C PSMB8 c.537+63C>G - IntronicSNV - 4/5
6-32809848-G-A PSMB8 c.537+63C>T - IntronicSNV - 4/5
20-62310872-T-G RTEL1 c.1110-330T>G - IntronicSNV - 12/34
22-46593336-A-T PPARA c.1-945A>T - IntronicSNV - 2/7
15-101862970-T-C PCSK6 c.2375-158A>G - intron_variant - 18/22
2-242167337-T-C HDLBP c.*1679A>G - 3-UTRSNV 28/28 -
15-58808883-A-G LIPC c.89-21649A>G - IntronicSNV - 1/8
8-19823192-T-C LPL c.*371T>C - 3-UTRSNV 10/10 -
12-57534470-G-A LRP1 c.191-687G>A - IntronicSNV - 2/88
16-67981896-A-G SLC12A4 c.1847+68T>C - IntronicSNV - 14/23
19-8431581-G-A ANGPTL4 c.547+378G>A - IntronicSNV - 3/6
19-8431581-G-C ANGPTL4 c.547+378G>C - IntronicSNV - 3/6
2-169782880-A-T ABCB11 c.3618+786T>A - IntronicSNV - 26/27
9-78631123-A-C PCSK5 c.412-7531A>C - IntronicSNV - 3/36
10-17022969-G-C CUBN c.4695+1514C>G - IntronicSNV - 31/66
10-17022969-G-T CUBN c.4695+1514C>A - IntronicSNV - 31/66
12-57534470-G-C LRP1 c.191-687G>C - IntronicSNV - 2/88
15-58741177-C-T LIPC c.88+16858C>T - IntronicSNV - 1/8
11-46745003-C-G F2 c.494C>G p.Thr165Arg Missense 6/14 -
10-17068275-C-T CUBN c.4018-6293G>A - IntronicSNV - 27/66
10-17004559-G-T CUBN c.4696-8012C>A - IntronicSNV - 31/66
9-107664961-A-G ABCA1 c.66+934T>C - IntronicSNV - 2/49
7-95054340-T-C PON2 c.75-443A>G - IntronicSNV - 1/8
7-95054340-T-G PON2 c.75-443A>C - IntronicSNV - 1/8
7-116194228-T-A CAV1 c.196-4772T>A - IntronicSNV - 2/2
8-19823617-A-G LPL c.*796A>G - 3-UTRSNV 10/10 -
8-19823617-A-T LPL c.*796A>T - 3-UTRSNV 10/10 -
4-103509436-G-A NFKB1 c.1066+3459G>A - IntronicSNV - 11/23
8-19803093-C-T LPL c.89-2598C>T - IntronicSNV - 1/9
10-16974133-T-C CUBN c.6124+953A>G - IntronicSNV - 40/66
1-179292000-T-C SOAT1 c.119-572T>C - IntronicSNV - 2/15
9-15296034-C-A TTC39B c.240+11048G>T - IntronicSNV - 1/19
16-57009769-T-A CETP c.981+706T>A - IntronicSNV - 10/15
6-35381099-C-A PPARD c.130+2105C>A - IntronicSNV - 3/7
18-47117174-T-C LIPG c.*282T>C - 3-UTRSNV 10/10 -
2-169811224-T-C ABCB11 c.2343+3250A>G - IntronicSNV - 19/27
10-17127826-T-C CUBN c.1948-68A>G - IntronicSNV - 15/66
9-78629756-C-G PCSK5 c.412-8898C>G - IntronicSNV - 3/36
16-57005479-C-A CETP c.658+186C>A - IntronicSNV - 7/15
8-19802894-G-T LPL c.89-2797G>T - IntronicSNV - 1/9
3-12359049-G-A PPARG c.-3+29530G>A - intron_variant - 1/6
10-17018268-T-G CUBN c.4695+6215A>C - IntronicSNV - 31/66
10-17018268-T-C CUBN c.4695+6215A>G - IntronicSNV - 31/66
7-95000591-G-A PON3 c.367+894C>T - IntronicSNV - 4/8
16-57008508-A-T CETP c.931-505A>T - IntronicSNV - 9/15
16-57008508-A-C CETP c.931-505A>C - IntronicSNV - 9/15
11-61551356-T-C MYRF c.3033T>C p.Ser1011Ser Synonymous 23/26 -
16-56919348-C-G SLC12A3 c.1925+72C>G - IntronicSNV - 15/25
16-56919348-C-A SLC12A3 c.1925+72C>A - IntronicSNV - 15/25
6-35369491-A-G PPARD c.1-9374A>G - IntronicSNV - 2/7
9-107562804-T-C ABCA1 c.4760A>G p.Lys1587Arg Missense 35/50 -
9-78515717-A-T PCSK5 c.192+9428A>T - IntronicSNV - 1/36
21-43709682-T-G ABCG1 c.1258-478T>G - IntronicSNV - 10/14
8-19813676-C-A LPL c.1018+82C>A - IntronicSNV - 6/9
2-170129547-C-T LRP2 c.2006G>A p.Gly669Asp Missense 15/79 -
7-95046708-C-T PON2 c.146-1099G>A - IntronicSNV - 2/8
1-179311602-T-G SOAT1 c.859+275T>G - IntronicSNV - 8/15
8-19804596-A-G LPL c.89-1095A>G - IntronicSNV - 1/9
8-19810787-C-A LPL c.430-34C>A - IntronicSNV - 3/9
12-125312612-G-C SCARB1 c.127-10359C>G - IntronicSNV - 1/12
9-78639044-G-A PCSK5 c.555+247G>A - IntronicSNV - 4/36
9-78620706-C-T PCSK5 c.412-17948C>T - IntronicSNV - 3/36
6-35337271-C-T PPARD c.-102+22344C>T - intron_variant - 2/7
10-17129226-A-G CUBN c.1947+937T>C - IntronicSNV - 15/66
1-179315898-C-A SOAT1 c.1118-837C>A - IntronicSNV - 11/15
11-116660813-G-A APOA5 c.*31C>T - 3-UTRSNV 4/4 -
7-95021803-T-G PON3 c.145+2153A>C - IntronicSNV - 2/8
7-95021803-T-C PON3 c.145+2153A>G - IntronicSNV - 2/8
4-103536413-T-C NFKB1 c.2750-1178T>C - IntronicSNV - 23/23
11-116654159-A-G ZPR1 c.981+87T>C - IntronicSNV - 10/13
8-19811967-C-T LPL c.775+103C>T - IntronicSNV - 5/9
12-57535266-C-A LRP1 c.300C>A p.Asp100Glu Missense 3/89 -
12-57535266-C-T LRP1 c.300C>T p.Asp100Asp Synonymous 3/89 -
2-169782481-A-T ABCB11 c.3619-1168T>A - IntronicSNV - 26/27
2-169791438-A-G ABCB11 c.3056+256T>C - IntronicSNV - 23/27
15-58729144-C-T LIPC c.88+4825C>T - IntronicSNV - 1/8
20-62311098-G-T RTEL1 c.1110-104G>T - IntronicSNV - 12/34
20-62311098-G-C RTEL1 c.1110-104G>C - IntronicSNV - 12/34
20-62311098-G-A RTEL1 c.1110-104G>A - IntronicSNV - 12/34
1-200128676-A-G NR5A2 c.1163-14415A>G - IntronicSNV - 6/6
15-58738760-G-A LIPC c.88+14441G>A - IntronicSNV - 1/8
10-90773525-G-A FAS c.677-351G>A - IntronicSNV - 8/8
9-137319031-G-A RXRA c.911-1923G>A - IntronicSNV - 6/9
9-107647220-C-T ABCA1 c.161-371G>A - IntronicSNV - 3/49
4-103446115-A-G NFKB1 c.1-561A>G - IntronicSNV - 1/23
8-19802969-C-G LPL c.89-2722C>G - IntronicSNV - 1/9
8-19806631-T-C LPL c.249+780T>C - IntronicSNV - 2/9
9-107657070-G-A ABCA1 c.67-5594C>T - IntronicSNV - 2/49
2-21226560-A-G APOB c.12088-354T>C - IntronicSNV - 28/28
16-56999258-A-C CETP c.233+2222A>C - IntronicSNV - 2/15
7-95034775-G-C PON2 c.932C>G p.Ser311Cys Missense 9/9 -
9-15289578-C-T TTC39B c.240+17504G>A - IntronicSNV - 1/19
12-125266432-T-C SCARB1 c.*797A>G - IntronicSNV - 12/12
15-58779039-T-C LIPC c.89-51493T>C - IntronicSNV - 1/8
16-57009932-C-T CETP c.981+869C>T - IntronicSNV - 10/15
12-125290856-A-T SCARB1 c.1009+1451T>A - IntronicSNV - 7/12
15-58741384-C-T LIPC c.88+17065C>T - IntronicSNV - 1/8
9-107647655-G-A ABCA1 c.161-806C>T - IntronicSNV - 3/49
2-169789306-T-A ABCB11 c.3057-263A>T - IntronicSNV - 23/27
9-107647655-G-T ABCA1 c.161-806C>A - IntronicSNV - 3/49
7-94948344-A-C PON1 c.75-639T>G - IntronicSNV - 1/8
12-125300472-G-T SCARB1 c.285-812C>A - IntronicSNV - 2/12
20-43039537-G-C HNF4A c.386-2797G>C - IntronicSNV - 3/9
20-43039537-G-A HNF4A c.386-2797G>A - IntronicSNV - 3/9
20-44576502-T-C PCIF1 c.*108T>C - 3-UTRSNV 17/17 -
6-35378778-C-T PPARD c.1-87C>T - 5-UTRSNV 3/8 -
4-103476166-T-A NFKB1 c.259-11978T>A - IntronicSNV - 5/23
3-105238615-G-A ALCAM c.74-296G>A - IntronicSNV - 1/15
8-19823648-A-T LPL c.*827A>T - 3-UTRSNV 10/10 -
8-19802711-T-C LPL c.89-2980T>C - IntronicSNV - 1/9
7-94948344-A-G PON1 c.75-639T>C - IntronicSNV - 1/8
8-19820433-T-C LPL c.1427+703T>C - IntronicSNV - 9/9
16-57007451-G-A CETP c.930+29G>A - IntronicSNV - 9/15
9-137285503-A-G RXRA c.29-7975A>G - IntronicSNV - 1/9
8-19799641-G-T LPL c.88+2602G>T - IntronicSNV - 1/9
15-58737341-T-A LIPC c.88+13022T>A - IntronicSNV - 1/8
15-58737341-T-G LIPC c.88+13022T>G - IntronicSNV - 1/8
2-44104067-G-A ABCG8 c.1757-633G>A - IntronicSNV - 11/12
16-57006378-A-G CETP c.750+383A>G - IntronicSNV - 8/15
9-107642287-C-G ABCA1 c.421+3033G>C - IntronicSNV - 5/49
1-161200487-C-T NR1I3 c.932+116G>A - IntronicSNV - 8/8
9-78654101-T-C PCSK5 c.632+12148T>C - IntronicSNV - 5/36
20-62329169-G-A TNFRSF6B c.619+294G>A - IntronicSNV - 2/2
19-45410444-G-A APOE c.43+520G>A - IntronicSNV - 2/3
4-103534560-C-G NFKB1 c.2593-22C>G - IntronicSNV - 22/23
4-103534560-C-A NFKB1 c.2593-22C>A - IntronicSNV - 22/23
8-19802402-C-T LPL c.89-3289C>T - IntronicSNV - 1/9
9-107564846-T-C ABCA1 c.4593-406A>G - IntronicSNV - 33/49
8-19812812-C-T LPL c.776-540C>T - IntronicSNV - 5/9
2-169801488-A-T ABCB11 c.2344-17T>A - IntronicSNV - 19/27
12-110027795-A-G MVK c.678-781A>G - IntronicSNV - 7/10
4-88023299-A-G AFF1 c.1263-3481A>G - IntronicSNV - 7/19
10-17009642-G-T CUBN c.4696-13095C>A - IntronicSNV - 31/66
16-57012563-A-T CETP c.1146+396A>T - IntronicSNV - 11/15
10-17009642-G-C CUBN c.4696-13095C>G - IntronicSNV - 31/66
12-57532982-T-C LRP1 c.190+618T>C - IntronicSNV - 2/88
11-47286290-T-C NR1H3 c.808+2721T>C - IntronicSNV - 6/8
15-58741177-C-G LIPC c.88+16858C>G - IntronicSNV - 1/8
20-44534651-G-A PLTP c.705+256C>T - IntronicSNV - 8/15
15-58801541-T-A LIPC c.89-28991T>A - IntronicSNV - 1/8
10-17081139-G-A CUBN c.4017+1893C>T - IntronicSNV - 27/66
15-58731455-T-C LIPC c.88+7136T>C - IntronicSNV - 1/8
9-78677939-C-T PCSK5 c.633-4932C>T - IntronicSNV - 5/36
9-107677512-G-C ABCA1 c.1-11552C>G - IntronicSNV - 1/49
15-58751201-T-A LIPC c.88+26882T>A - IntronicSNV - 1/8
12-125293557-G-A SCARB1 c.843-1084C>T - IntronicSNV - 6/12
1-93700212-C-T CCDC18 c.2461-1593C>T - IntronicSNV - 18/27
16-57011185-G-A CETP c.982-818G>A - IntronicSNV - 10/15
21-43658206-G-A ABCG1 c.319+12182G>A - IntronicSNV - 2/14
15-58735005-A-G LIPC c.88+10686A>G - IntronicSNV - 1/8
15-58825713-T-C LIPC c.89-4819T>C - IntronicSNV - 1/8
9-107582780-G-A ABCA1 c.2961-430C>T - IntronicSNV - 20/49
16-57011452-G-A CETP c.982-551G>A - IntronicSNV - 10/15
7-95061921-A-G PON2 c.74+2269T>C - IntronicSNV - 1/8
15-58836308-C-T LIPC c.574+1458C>T - IntronicSNV - 4/8
16-57014875-A-G CETP c.1147-195A>G - IntronicSNV - 11/15
16-57014875-A-C CETP c.1147-195A>C - IntronicSNV - 11/15
9-107647019-C-T ABCA1 c.161-170G>A - IntronicSNV - 3/49
12-57540848-C-G LRP1 c.841+1575C>G - IntronicSNV - 6/88
21-43710909-C-G ABCG1 c.1427-293C>G - IntronicSNV - 11/14
2-169988371-A-T LRP2 c.13728+713T>A - IntronicSNV - 77/78
9-107647121-A-G ABCA1 c.161-272T>C - IntronicSNV - 3/49
21-43710774-G-A ABCG1 c.1427-428G>A - IntronicSNV - 11/14
2-242168976-T-C HDLBP c.*40A>G - 3-UTRSNV 28/28 -
9-137295485-A-G RXRA c.279+1757A>G - IntronicSNV - 2/9
7-95036876-T-A PON2 c.696-496A>T - IntronicSNV - 6/8
17-76403984-G-A PGS1 c.1402+3814G>A - IntronicSNV - 7/9
11-116662331-G-C APOA5 c.132C>G p.Ile44Met Missense 3/4 -
4-103486697-A-T NFKB1 c.259-1447A>T - IntronicSNV - 5/23
9-107635869-C-T ABCA1 c.421+9451G>A - IntronicSNV - 5/49
16-67985706-C-T SLC12A4 c.1132+20G>A - IntronicSNV - 8/23
12-124460167-G-T ZNF664 c.-757+1600G>T - intron_variant - 2/4
2-169789306-T-C ABCB11 c.3057-263A>G - IntronicSNV - 23/27
8-19803802-A-C LPL c.89-1889A>C - IntronicSNV - 1/9
9-107545903-G-A ABCA1 c.*693C>T - 3-UTRSNV 50/50 -
8-19822830-G-A LPL c.*9G>A - 3-UTRSNV 10/10 -
4-103537442-C-T NFKB1 c.2750-149C>T - IntronicSNV - 23/23
15-58730498-C-G LIPC c.88+6179C>G - IntronicSNV - 1/8
15-58730498-C-T LIPC c.88+6179C>T - IntronicSNV - 1/8
15-101867487-C-G PCSK6 c.2075-803G>C - intron_variant - 16/22
15-101867487-C-T PCSK6 c.2075-803G>A - intron_variant - 16/22
16-67985706-C-A SLC12A4 c.1132+20G>T - IntronicSNV - 8/23
7-94991632-T-C PON3 c.906+42A>G - IntronicSNV - 8/8
11-122530591-C-G UBASH3B c.161+3673C>G - IntronicSNV - 1/13
15-58801943-A-T LIPC c.89-28589A>T - IntronicSNV - 1/8
15-58801943-A-G LIPC c.89-28589A>G - IntronicSNV - 1/8
7-116197245-G-A CAV1 c.196-1755G>A - IntronicSNV - 2/2
8-19802894-G-A LPL c.89-2797G>A - IntronicSNV - 1/9
16-57000284-G-C CETP c.234-3014G>C - IntronicSNV - 2/15
11-116728630-G-A SIK3 c.3407C>T - missense_variant 20/24 -
16-57009941-T-C CETP c.981+878T>C - IntronicSNV - 10/15
11-116728630-G-T SIK3 c.3407C>A - missense_variant 20/24 -
4-103443569-G-A NFKB1 c.1-3107G>A - IntronicSNV - 1/23
2-165548569-G-A COBLL1 c.3414+162C>T - IntronicSNV - 13/13
22-46591752-A-G PPARA c.1-2529A>G - IntronicSNV - 2/7
22-46570342-A-G PPARA c.-43+22469A>G - intron_variant - 2/7
4-103515591-G-C NFKB1 c.1211-458G>C - IntronicSNV - 12/23
9-107661059-A-G ABCA1 c.66+4836T>C - IntronicSNV - 2/49
1-179311602-T-C SOAT1 c.859+275T>C - IntronicSNV - 8/15
4-103486697-A-C NFKB1 c.259-1447A>C - IntronicSNV - 5/23
15-58820978-A-G LIPC c.89-9554A>G - IntronicSNV - 1/8
12-125320850-C-T SCARB1 c.127-18597G>A - IntronicSNV - 1/12
9-107648430-G-A ABCA1 c.161-1581C>T - IntronicSNV - 3/49
9-137322710-T-C RXRA c.1044-1041T>C - IntronicSNV - 7/9
15-58820978-A-T LIPC c.89-9554A>T - IntronicSNV - 1/8
6-35337291-G-C PPARD c.-102+22364G>C - intron_variant - 2/7
20-44533110-A-G PLTP c.942+329T>C - IntronicSNV - 10/15
10-108914748-T-G SORCS1 c.558+8979A>C - IntronicSNV - 1/25
5-53298025-G-A ARL15 c.462+111007C>T - IntronicSNV - 4/4
12-125318772-C-T SCARB1 c.127-16519G>A - IntronicSNV - 1/12
15-58741134-A-T LIPC c.88+16815A>T - IntronicSNV - 1/8
6-35393404-A-G PPARD c.1079-205A>G - IntronicSNV - 7/7
9-107642211-T-C ABCA1 c.421+3109A>G - IntronicSNV - 5/49
7-94949801-G-A PON1 c.75-2096C>T - IntronicSNV - 1/8
11-61548559-A-G MYRF c.2467+42A>G - IntronicSNV - 19/25
15-58727325-A-G LIPC c.88+3006A>G - IntronicSNV - 1/8
4-103457585-G-T NFKB1 c.160-1430G>T - IntronicSNV - 4/23
15-58741134-A-C LIPC c.88+16815A>C - IntronicSNV - 1/8
11-117027942-T-C PAFAH1B2 c.82-2708T>C - IntronicSNV - 2/5
9-107684318-A-C ABCA1 c.-93+5898T>G - intron_variant - 1/49
6-35375526-C-A PPARD c.1-3339C>A - IntronicSNV - 2/7
4-103444533-T-C NFKB1 c.1-2143T>C - IntronicSNV - 1/23
16-57000284-G-A CETP c.234-3014G>A - IntronicSNV - 2/15
10-16994047-C-A CUBN c.4969+228G>T - IntronicSNV - 33/66
8-19819536-T-G LPL c.1323-90T>G - IntronicSNV - 8/9
8-19811417-C-T LPL c.542-214C>T - IntronicSNV - 4/9
6-35375526-C-T PPARD c.1-3339C>T - IntronicSNV - 2/7
8-19811901-T-C LPL c.775+37T>C - IntronicSNV - 5/9
8-19820086-A-G LPL c.1427+356A>G - IntronicSNV - 9/9
8-19819077-T-G LPL c.1322+483T>G - IntronicSNV - 8/9
11-46743247-T-C F2 c.316+857T>C - IntronicSNV - 4/13
8-19824071-A-T LPL c.*1250A>T - 3-UTRSNV 10/10 -
9-107601625-T-C ABCA1 c.1054+935A>G - IntronicSNV - 9/49
9-107665739-G-A ABCA1 c.66+156C>T - IntronicSNV - 2/49
7-95047830-C-T PON2 c.146-2221G>A - IntronicSNV - 2/8
9-107598740-C-T ABCA1 c.1311+521G>A - IntronicSNV - 11/49
10-17127361-T-C CUBN c.2110+235A>G - IntronicSNV - 16/66
11-47327217-G-A MADD c.3514-2925G>A - IntronicSNV - 22/32
15-58801541-T-C LIPC c.89-28991T>C - IntronicSNV - 1/8
8-19824071-A-G LPL c.*1250A>G - 3-UTRSNV 10/10 -
9-107642287-C-T ABCA1 c.421+3033G>A - IntronicSNV - 5/49
16-57003146-T-C CETP c.234-152T>C - IntronicSNV - 2/15
16-57015091-G-C CETP c.1168G>C p.Ala390Pro Missense 12/16 -
18-47109955-A-G LIPG c.1187A>G p.Asn396Ser Missense 8/10 -
16-57002732-T-G CETP c.234-566T>G - IntronicSNV - 2/15
1-200015228-T-C NR5A2 c.247+516T>C - IntronicSNV - 3/6
22-46622384-T-C PPARA c.712-5305T>C - IntronicSNV - 6/7
22-46622384-T-G PPARA c.712-5305T>G - IntronicSNV - 6/7
7-94948626-A-C PON1 c.75-921T>G - IntronicSNV - 1/8
9-78617840-G-A PCSK5 c.411+16679G>A - IntronicSNV - 3/36
11-61551356-T-G MYRF c.3033T>G p.Ser1011Arg Missense 23/26 -
11-61551356-T-A MYRF c.3033T>A p.Ser1011Arg Missense 23/26 -
10-17004730-A-C CUBN c.4696-8183T>G - IntronicSNV - 31/66
10-17004730-A-T CUBN c.4696-8183T>A - IntronicSNV - 31/66
6-35371624-G-A PPARD c.1-7241G>A - IntronicSNV - 2/7
11-116658031-T-G ZPR1 c.333+167A>C - IntronicSNV - 2/13
9-107669241-T-C ABCA1 c.1-3281A>G - IntronicSNV - 1/49
15-58730889-A-G LIPC c.88+6570A>G - IntronicSNV - 1/8
16-57000885-G-A CETP c.234-2413G>A - IntronicSNV - 2/15
6-35372524-G-C PPARD c.1-6341G>C - IntronicSNV - 2/7
9-78625640-T-C PCSK5 c.412-13014T>C - IntronicSNV - 3/36
15-58836308-C-G LIPC c.574+1458C>G - IntronicSNV - 4/8
15-58736778-C-T LIPC c.88+12459C>T - IntronicSNV - 1/8
10-108914748-T-C SORCS1 c.558+8979A>G - IntronicSNV - 1/25
15-58829894-A-G LIPC c.89-638A>G - IntronicSNV - 1/8
11-116653296-C-T ZPR1 c.1093-336G>A - IntronicSNV - 11/13
7-95041016-G-C PON2 c.443C>G p.Ala148Gly Missense 5/9 -
15-101914204-G-C PCSK6 c.1530-3476C>G - intron_variant - 12/22
15-101914204-G-A PCSK6 c.1530-3476C>T - intron_variant - 12/22
11-116653296-C-G ZPR1 c.1093-336G>C - IntronicSNV - 11/13
16-56997369-A-T CETP c.233+333A>T - IntronicSNV - 2/15
16-57005301-C-T CETP c.658+8C>T - IntronicSNV - 7/15
11-117021923-C-T PAFAH1B2 c.1-1241C>T - IntronicSNV - 1/5
9-78576644-G-A PCSK5 c.298-24404G>A - IntronicSNV - 2/36
4-103514993-A-G NFKB1 c.1210+268A>G - IntronicSNV - 12/23
11-119028813-C-A ABCG4 c.1069-131C>A - IntronicSNV - 9/14
11-119028813-C-G ABCG4 c.1069-131C>G - IntronicSNV - 9/14
16-68024995-G-A DPEP2 c.732+23C>T - IntronicSNV - 6/10
10-108513945-C-T SORCS1 c.959+7401G>A - IntronicSNV - 5/25
8-19801112-G-A LPL c.88+4073G>A - IntronicSNV - 1/9
6-35357674-C-T PPARD c.1-21191C>T - IntronicSNV - 2/7
8-116599199-T-C TRPS1 c.2700+29A>G - IntronicSNV - 5/6
8-116599199-T-G TRPS1 c.2700+29A>C - IntronicSNV - 5/6
2-169796288-T-A ABCB11 c.2611-3345A>T - IntronicSNV - 21/27
10-108716473-A-G SORCS1 c.559-135T>C - IntronicSNV - 1/25
10-108716473-A-T SORCS1 c.559-135T>A - IntronicSNV - 1/25
2-169796288-T-C ABCB11 c.2611-3345A>G - IntronicSNV - 21/27
1-230294916-C-T GALNT2 c.127-19048C>T - IntronicSNV - 1/15
6-35344426-T-C PPARD c.-102+29499T>C - intron_variant - 2/7
15-101891537-T-A PCSK6 c.1855+14864A>T - intron_variant - 14/22
9-107586753-T-C ABCA1 c.2649A>G p.Ile883Met Missense 18/50 -
11-116652207-C-T ZPR1 c.1179+667G>A - IntronicSNV - 12/13
6-35395010-C-T PPARD c.*1154C>T - 3-UTRSNV 8/8 -
2-21237544-G-A APOB c.3697-79C>T - IntronicSNV - 23/28
12-57844049-C-T INHBC c.*244C>T - 3-UTRSNV 2/2 -
9-107657253-G-C ABCA1 c.67-5777C>G - IntronicSNV - 2/49
20-62323006-G-T RTEL1 c.2629-89G>T - IntronicSNV - 27/34
10-17127826-T-A CUBN c.1948-68A>T - IntronicSNV - 15/66
16-57007192-T-C CETP c.751-51T>C - IntronicSNV - 8/15
15-58823416-T-C LIPC c.89-7116T>C - IntronicSNV - 1/8
2-21233999-T-C APOB c.5741A>G p.Asn1914Ser Missense 26/29 -
2-44048591-C-T ABCG5 c.1463+1345G>A - IntronicSNV - 10/12
9-78536918-A-T PCSK5 c.193-10377A>T - IntronicSNV - 1/36
11-117034729-T-C PAFAH1B2 c.411+121T>C - IntronicSNV - 5/5
9-107599735-G-C ABCA1 c.1168C>G p.Pro390Ala Missense 10/50 -
17-2581260-A-G PAFAH1B1 c.1002+1360A>G - IntronicSNV - 9/10
15-58724842-G-A LIPC c.88+523G>A - IntronicSNV - 1/8
17-66875294-C-G ABCA8 c.3919-1474G>C - IntronicSNV - 30/37
9-107651526-A-G ABCA1 c.67-50T>C - IntronicSNV - 2/49
9-137303790-C-T RXRA c.610+2825C>T - IntronicSNV - 4/9
11-116652301-C-T ZPR1 c.1179+573G>A - IntronicSNV - 12/13
19-11347493-T-C DOCK6 c.2136A>G p.Thr712Thr Synonymous 19/48 -
16-56999328-C-T CETP c.233+2292C>T - IntronicSNV - 2/15
12-125321383-T-A SCARB1 c.127-19130A>T - IntronicSNV - 1/12
12-125321383-T-C SCARB1 c.127-19130A>G - IntronicSNV - 1/12
9-137320481-G-A RXRA c.911-473G>A - IntronicSNV - 6/9
20-44532480-C-T PLTP c.942+959G>A - IntronicSNV - 10/15
20-44532480-C-A PLTP c.942+959G>T - IntronicSNV - 10/15
6-35391787-C-T PPARD c.489C>T p.Asn163Asn Synonymous 6/8 -
12-125269475-T-C SCARB1 c.1401+1428A>G - IntronicSNV - 11/12
6-35391787-C-G PPARD c.489C>G p.Asn163Lys Missense 6/8 -
6-35333741-G-A PPARD c.-102+18814G>A - intron_variant - 2/7
8-19821815-T-G LPL c.-1-1006T>G - IntronicSNV - 9/9