PMID: 21851846

Validation of candidate genes associated with cardiovascular risk factors in psychiatric patients.

Progress in neuro-psychopharmacology & biological psychiatry
A Windemuth, J de Leon, JW Goethe, HI Schwartz, S Woolley, M Susce, M Kocherla, K Bogaard, TR Holford, RL Seip, G RuaƱo
2012-03-30

46 variants were identified in this publication


Variant ID Gene cDNA Protein Consequence Exon Intron
1-230310972-T-C GALNT2 c.127-2992T>C - IntronicSNV - 1/15
12-109675029-T-A ACACB c.4506T>A p.Leu1502Leu Synonymous 34/53 -
8-19810787-C-A LPL c.430-34C>A - IntronicSNV - 3/9
16-56919348-C-A SLC12A3 c.1925+72C>A - IntronicSNV - 15/25
16-56919348-C-G SLC12A3 c.1925+72C>G - IntronicSNV - 15/25
11-116662579-C-T APOA5 c.1-3G>A - 5-UTRSNV 2/4 -
11-47663049-A-G MTCH2 c.87+882T>C - IntronicSNV - 1/12
12-109675029-T-C ACACB c.4506T>C p.Leu1502Leu Synonymous 34/53 -
1-230295691-G-A GALNT2 c.127-18273G>A - IntronicSNV - 1/15
16-56852822-G-T NUP93 c.564+172G>T - IntronicSNV - 6/21
9-104362937-A-G GRIN3A c.2766+12721T>C - IntronicSNV - 6/8
12-109895168-C-G KCTD10 c.527+267G>C - IntronicSNV - 5/6
9-104359261-G-A GRIN3A c.2766+16397C>T - IntronicSNV - 6/8
1-63049593-C-T DOCK7 c.1801-668G>A - IntronicSNV - 15/48
9-104359261-G-C GRIN3A c.2766+16397C>G - IntronicSNV - 6/8
1-230297659-C-T GALNT2 c.127-16305C>T - IntronicSNV - 1/15
9-107647220-C-T ABCA1 c.161-371G>A - IntronicSNV - 3/49
3-118948155-C-T B4GALT4 c.253+539G>A - IntronicSNV - 3/7
1-230294916-C-T GALNT2 c.127-19048C>T - IntronicSNV - 1/15
2-28076708-C-G RBKS c.222+4598G>C - IntronicSNV - 2/7
12-109675029-T-G ACACB c.4506T>G p.Leu1502Leu Synonymous 34/53 -
16-68024995-G-A DPEP2 c.732+23C>T - IntronicSNV - 6/10
11-116649135-G-A ZPR1 c.*506C>T - IntergenicSNV 14/14 -
1-63049593-C-G DOCK7 c.1801-668G>C - IntronicSNV - 15/48
2-28076708-C-A RBKS c.222+4598G>T - IntronicSNV - 2/7
16-28881202-A-C SH2B1 c.1309+498A>C - IntronicSNV - 4/8
19-11152650-C-T SMARCA4 c.4424+414C>T - IntronicSNV - 30/34
16-56997233-G-A CETP c.233+197G>A - IntronicSNV - 2/15
19-19329924-C-A NCAN c.274C>A p.Pro92Thr Missense 3/15 -
16-53821615-A-G FTO c.46-22437A>G - IntronicSNV - 1/8
3-118948171-A-G B4GALT4 c.253+523T>C - IntronicSNV - 3/7
16-56883924-A-G NUP93 c.*5403A>G - IntergenicSNV 22/22 -
16-28883241-A-T SH2B1 c.1450A>T p.Thr484Ser Missense 5/9 -
15-58727325-A-G LIPC c.88+3006A>G - IntronicSNV - 1/8
16-28883241-A-G SH2B1 c.1450A>G p.Thr484Ala Missense 5/9 -
17-35609866-C-T ACACA c.1812G>A p.Gln604Gln Synonymous 15/56 -
7-72982874-C-T TBL2 c.*1963G>A - IntergenicSNV 7/7 -
1-63045506-A-C DOCK7 c.1872-869T>G - IntronicSNV - 16/48
11-116652207-C-T ZPR1 c.1179+667G>A - IntronicSNV - 12/13
7-24326981-C-T NPY c.188+1934C>T - IntronicSNV - 2/3
2-28078994-G-A RBKS c.222+2312C>T - IntronicSNV - 2/7
2-21232195-G-A APOB c.7545C>T p.Thr2515Thr Synonymous 26/29 -
18-47099186-A-G LIPG c.572-2553A>G - IntronicSNV - 4/9
19-19329924-C-T NCAN c.274C>T p.Pro92Ser Missense 3/15 -
1-109822509-T-C PSRC1 c.*266A>G - 3-UTRSNV 8/8 -
12-109895958-G-A KCTD10 c.388-75C>T - IntronicSNV - 3/6