PMID: 21935451

Host genetic risk factors for West Nile virus infection and disease progression.

PloS one
AW Bigham, KJ Buckingham, S Husain, MJ Emond, KM Bofferding, H Gildersleeve, A Rutherford, NM Astakhova, AA Perelygin, MP Busch, KO Murray, JJ Sejvar, S Green, J Kriesel, MA Brinton, M Bamshad
2011

344 variants were identified in this publication


Variant ID Gene cDNA Protein Consequence Exon Intron
12-113398919-G-C OAS3 c.1701G>C p.Ser567Ser Synonymous 8/16 -
12-113398919-G-A OAS3 c.1701G>A p.Ser567Ser Synonymous 8/16 -
11-117872086-G-T IL10RA c.*1730G>T - 3-UTRSNV 7/7 -
11-117872086-G-A IL10RA c.*1730G>A - 3-UTRSNV 7/7 -
19-50169020-T-C IRF3 c.-141A>G - 5_prime_UTR_variant 1/8 -
19-6668972-C-G TNFSF14 c.219+890G>C - IntronicSNV - 2/4
2-191835596-T-G STAT1 c.2239-153A>C - IntronicSNV - 24/24
2-242795312-C-G PDCD1 c.77-180G>C - IntronicSNV - 1/4
10-54528266-G-A MBL2 c.378C>T p.Leu126Leu Synonymous 4/4 -
19-7832183-A-G CLEC4M c.937-219A>G - IntronicSNV - 5/6
12-7900184-C-T CLEC4C c.1-240G>A - IntronicSNV - 1/5
12-7900184-C-A CLEC4C c.1-240G>T - IntronicSNV - 1/5
X-23801593-A-G SAT1 c.66+59A>G - IntronicSNV - 1/5
11-126162607-G-A TIRAP c.303G>A p.Gln101Gln Synonymous 5/5 -
3-119263770-T-C CD80 c.101-56A>G - IntronicSNV - 2/6
3-119245917-G-A CD80 c.*701C>T - IntronicSNV 7/7 -
3-38184021-A-G MYD88 c.*1244A>G - 3-UTRSNV 5/5 -
21-42798065-G-T MX1 c.-308-1068G>T - intron_variant - 3/18
1-206943968-C-T IL10 c.378+284G>A - IntronicSNV - 3/4
11-2408624-G-C CD81 c.67-3018G>C - IntronicSNV - 1/7
10-91159910-T-A IFIT1 c.6-2128T>A - IntronicSNV - 1/1
10-91159910-T-G IFIT1 c.6-2128T>G - IntronicSNV - 1/1
21-45647421-T-C ICOSLG c.*1496A>G - 3-UTRSNV 7/7 -
9-5456523-T-C CD274 c.52+358T>C - IntronicSNV - 2/6
21-42810820-G-A MX1 c.437-801G>A - IntronicSNV - 9/18
12-64874102-A-C TBK1 c.812+200A>C - IntronicSNV - 7/20
3-121839639-G-A CD86 c.*1258G>A - 3-UTRSNV 7/7 -
17-76353793-A-G SOCS3 c.*706T>C - 3-UTRSNV 2/2 -
2-179301884-A-G PRKRA c.610-838T>C - IntronicSNV - 6/7
7-128585104-A-G IRF5 c.196-795A>G - IntronicSNV - 2/8
4-103527876-T-C NFKB1 c.1954+22T>C - IntronicSNV - 17/23
19-7809327-C-T CD209 c.901-222G>A - IntronicSNV - 5/6
2-37383315-A-C EIF2AK2 c.-418+736T>G - intron_variant - 1/16
10-91065949-A-C IFIT2 c.236A>C p.Glu79Ala Missense 2/2 -
10-91065949-A-G IFIT2 c.236A>G p.Glu79Gly Missense 2/2 -
1-206943297-A-G IL10 c.379-58T>C - IntronicSNV - 3/4
21-34711798-C-T IFNAR1 c.201-1507C>T - IntronicSNV - 2/10
8-71486085-A-T TRAM1 c.*1082T>A - 3-UTRSNV 11/11 -
2-37383315-A-G EIF2AK2 c.-418+736T>C - intron_variant - 1/16
1-65351068-C-T JAK1 c.6+874G>A - IntronicSNV - 2/24
11-126163064-A-G TIRAP c.*52A>G - 3-UTRSNV 5/5 -
1-206944952-T-G IL10 c.166-192A>C - IntronicSNV - 1/4
1-117311147-C-A CD2 c.798C>A p.His266Gln Missense 5/5 -
X-70838054-C-A CXCR3 c.-92+234G>T - intron_variant - 1/1
X-70838054-C-T CXCR3 c.-92+234G>A - intron_variant - 1/1
X-70838054-C-G CXCR3 c.-92+234G>C - intron_variant - 1/1
8-71486085-A-C TRAM1 c.*1082T>G - 3-UTRSNV 11/11 -
1-65301669-C-A JAK1 c.3258+112G>T - IntronicSNV - 23/24
10-72357713-C-T PRF1 c.*96G>A - 3-UTRSNV 3/3 -
12-113409260-T-C OAS3 c.*1482T>C - 3-UTRSNV 16/16 -
21-42804679-G-A MX1 c.105+577G>A - IntronicSNV - 7/18
3-121825197-G-A CD86 c.535G>A p.Val179Ile Missense 4/7 -
4-185568113-C-A CASP3 c.-16+1506G>T - intron_variant - 2/7
9-21441310-T-C IFNA1 c.*234T>C - 3-UTRSNV 1/1 -
9-21441310-T-G IFNA1 c.*234T>G - 3-UTRSNV 1/1 -
4-185568113-C-T CASP3 c.-16+1506G>A - intron_variant - 2/7
4-185568113-C-G CASP3 c.-16+1506G>C - intron_variant - 2/7
1-65312813-A-G JAK1 c.1900-394T>C - IntronicSNV - 13/24
10-91156831-T-C IFIT1 c.5+4357T>C - IntronicSNV - 1/1
19-7831429-C-G CLEC4M c.785-113C>G - IntronicSNV - 4/6
12-113357193-G-A OAS1 c.1039-99G>A - IntronicSNV - 5/5
X-12896110-T-C TLR7 c.4-7521T>C - IntronicSNV - 2/2
11-36510071-T-C TRAF6 c.*1317A>G - 3-UTRSNV 8/8 -
12-113357193-G-C OAS1 c.1039-99G>C - IntronicSNV - 5/5
1-117297734-A-G CD2 c.382+161A>G - IntronicSNV - 2/4
4-185559487-G-C CASP3 c.53+68C>G - IntronicSNV - 3/7
12-7884351-A-G CLEC4C c.289-843T>C - IntronicSNV - 4/5
14-24634825-G-A IRF9 c.992-231G>A - IntronicSNV - 7/8
1-117303497-C-T CD2 c.613+243C>T - IntronicSNV - 3/4
X-12899765-A-G TLR7 c.4-3866A>G - IntronicSNV - 2/2
X-12899765-A-T TLR7 c.4-3866A>T - IntronicSNV - 2/2
21-42819564-T-A MX1 c.1273+1496T>A - IntronicSNV - 15/18
12-121471216-C-G OASL c.481+48G>C - IntronicSNV - 2/5
3-121838319-G-A CD86 c.910G>A p.Ala304Thr Missense 7/7 -
2-37367107-G-A EIF2AK2 c.390-207C>T - IntronicSNV - 5/16
10-90774772-A-T FAS c.*565A>T - 3-UTRSNV 9/9 -
2-37367107-G-C EIF2AK2 c.390-207C>G - IntronicSNV - 5/16
21-42823372-C-T MX1 c.1509+202C>T - IntronicSNV - 17/18
17-32583269-T-C CCL2 c.105T>C p.Cys35Cys Synonymous 2/3 -
21-42801567-C-G MX1 c.-97-893C>G - intron_variant - 5/18
8-71507012-T-C TRAM1 c.486-187A>G - IntronicSNV - 5/10
21-34698924-A-G IFNAR1 c.76+1488A>G - IntronicSNV - 1/10
12-44175338-T-C IRAK4 c.942-772T>C - IntronicSNV - 9/12
21-42804870-C-T MX1 c.105+768C>T - IntronicSNV - 7/18
21-42806164-T-A MX1 c.106-1600T>A - IntronicSNV - 7/18
21-34730954-G-A IFNAR1 c.*3099G>A - 3-UTRSNV 11/11 -
12-44162768-A-C IRAK4 c.161+693A>C - IntronicSNV - 3/12
12-44162768-A-T IRAK4 c.161+693A>T - IntronicSNV - 3/12
12-7890549-C-T CLEC4C c.143-379G>A - IntronicSNV - 3/5
2-37373250-T-C EIF2AK2 c.240+746A>G - IntronicSNV - 4/16
6-137519780-T-C IFNGR1 c.862-4A>G - IntronicSNV - 6/6
21-34704320-G-A IFNAR1 c.77-3510G>A - IntronicSNV - 1/10
1-65303510-G-A JAK1 c.3140+105C>T - IntronicSNV - 22/24
9-123665901-T-A TRAF1 c.*1397A>T - 3-UTRSNV 8/8 -
8-39779989-C-T IDO1 c.438-82C>T - IntronicSNV - 5/9
8-39779989-C-A IDO1 c.438-82C>A - IntronicSNV - 5/9
10-91066769-C-A IFIT2 c.1056C>A p.Asp352Glu Missense 2/2 -
10-91066769-C-T IFIT2 c.1056C>T p.Asp352Asp Synonymous 2/2 -
3-119248967-G-C CD80 c.701-183C>G - IntronicSNV - 4/6
11-46332893-T-G CREB3L1 c.753+153T>G - IntronicSNV - 5/11
3-119248967-G-T CD80 c.701-183C>A - IntronicSNV - 4/6
9-5557708-T-C PDCD1LG2 c.722T>C p.Ile241Thr Missense 5/7 -
12-64846811-G-T TBK1 c.-32+844G>T - intron_variant - 1/20
12-64846811-G-C TBK1 c.-32+844G>C - intron_variant - 1/20
12-64846811-G-A TBK1 c.-32+844G>A - intron_variant - 1/20
1-65318584-T-C JAK1 c.1649-1991A>G - IntronicSNV - 11/24
X-12894442-G-T TLR7 c.3+8742G>T - IntronicSNV - 2/2
8-71513130-T-C TRAM1 c.124-813A>G - IntronicSNV - 1/10
21-42829846-A-G MX1 c.1759-609A>G - IntronicSNV - 18/18
21-42829846-A-C MX1 c.1759-609A>C - IntronicSNV - 18/18
X-12894442-G-C TLR7 c.3+8742G>C - IntronicSNV - 2/2
X-12894442-G-A TLR7 c.3+8742G>A - IntronicSNV - 2/2
2-204824324-A-G ICOS c.*2A>G - 3-UTRSNV 5/5 -
2-204824324-A-C ICOS c.*2A>C - 3-UTRSNV 5/5 -
2-191841759-G-A STAT1 c.1874-8C>T - IntronicSNV - 21/24
2-37367495-A-T EIF2AK2 c.390-595T>A - IntronicSNV - 5/16
2-204592021-G-A CD28 c.409+309G>A - IntronicSNV - 2/3
9-5467955-G-A CD274 c.*93G>A - 3-UTRSNV 7/7 -
1-65330682-G-A JAK1 c.991-27C>T - IntronicSNV - 7/24
21-34716789-T-G IFNAR1 c.674-763T>G - IntronicSNV - 5/10
21-42821694-T-C MX1 c.1432+472T>C - IntronicSNV - 16/18
20-44747086-G-A CD40 c.51+53G>A - IntronicSNV - 1/8
19-50162909-C-G IRF3 c.1280G>C p.Ser427Thr Missense 8/8 -
19-50162909-C-A IRF3 c.1280G>T p.Ser427Ile Missense 8/8 -
19-7810006-G-A CD209 c.749-28C>T - IntronicSNV - 4/6
21-42818790-C-T MX1 c.1273+722C>T - IntronicSNV - 15/18
21-42818790-C-A MX1 c.1273+722C>A - IntronicSNV - 15/18
12-113386779-C-A OAS3 c.1143C>A p.Ser381Arg Missense 6/16 -
1-182545221-C-T RNASEL c.2039+170G>A - IntronicSNV - 6/6
10-54526762-T-C MBL2 c.*1135A>G - 3-UTRSNV 4/4 -
11-126153843-A-G TIRAP c.-386+795A>G - intron_variant - 1/4
12-113386779-C-G OAS3 c.1143C>G p.Ser381Arg Missense 6/16 -
12-44174766-C-T IRAK4 c.942-1344C>T - IntronicSNV - 9/12
9-123665297-C-T TRAF1 c.*2001G>A - 3-UTRSNV 8/8 -
4-185567931-C-T CASP3 c.-16+1688G>A - intron_variant - 2/7
2-179308502-A-C PRKRA c.397-391T>G - IntronicSNV - 4/7
2-179308502-A-T PRKRA c.397-391T>A - IntronicSNV - 4/7
19-7832959-C-T CLEC4M c.1049+445C>T - IntronicSNV - 6/6
19-7832959-C-G CLEC4M c.1049+445C>G - IntronicSNV - 6/6
4-76942943-C-G CXCL10 c.*140G>C - 3-UTRSNV 4/4 -
4-185554300-C-A CASP3 c.179-750G>T - IntronicSNV - 4/7
3-119263680-C-T CD80 c.135G>A p.Val45Val Synonymous 3/7 -
4-185554300-C-T CASP3 c.179-750G>A - IntronicSNV - 4/7
3-119263680-C-G CD80 c.135G>C p.Val45Val Synonymous 3/7 -
9-5457733-T-C CD274 c.394+313T>C - IntronicSNV - 3/6
1-65350122-A-G JAK1 c.7-964T>C - IntronicSNV - 2/24
6-137519588-A-C IFNGR1 c.1050T>G p.Ser350Ser Synonymous 7/7 -
19-6663916-G-A TNFSF14 c.*1021C>T - 3-UTRSNV 5/5 -
2-191860502-C-A STAT1 c.786-557G>T - IntronicSNV - 9/24
11-46313891-C-G CREB3L1 c.103-7595C>G - IntronicSNV - 1/11
12-113403684-C-G OAS3 c.2539C>G p.Leu847Val Missense 12/16 -
1-206943968-C-A IL10 c.378+284G>T - IntronicSNV - 3/4
3-119243549-G-A CD80 c.*1086C>T - 3_prime_UTR_variant 7/7 -
8-71493922-T-C TRAM1 c.1051+1477A>G - IntronicSNV - 10/10
X-12902885-T-C TLR7 c.4-746T>C - IntronicSNV - 2/2
12-113385918-C-T OAS3 c.1029+14C>T - IntronicSNV - 5/15
12-113408997-G-C OAS3 c.*1219G>C - 3-UTRSNV 16/16 -
21-34704201-C-G IFNAR1 c.77-3629C>G - IntronicSNV - 1/10
1-117311147-C-G CD2 c.798C>G p.His266Gln Missense 5/5 -
12-113345256-C-A OAS1 c.180+232C>A - IntronicSNV - 1/5
8-71501474-A-C TRAM1 c.571-2063T>G - IntronicSNV - 6/10
12-113376388-G-A OAS3 c.53G>A p.Arg18Lys Missense 1/16 -
3-38182136-C-G MYD88 c.644+77C>G - intron_variant - 3/4
21-42830690-A-G MX1 c.*5A>G - 3-UTRSNV 19/19 -
4-185559734-C-T CASP3 c.1-127G>A - IntronicSNV 2/8 -
4-187000321-G-T TLR3 c.633+136G>T - IntronicSNV - 3/4
2-191841759-G-T STAT1 c.1874-8C>A - IntronicSNV - 21/24
9-5510644-A-G PDCD1LG2 c.-174A>G - 5_prime_UTR_variant 1/7 -
3-119263680-C-A CD80 c.135G>T p.Val45Val Synonymous 3/7 -
3-121839639-G-C CD86 c.*1258G>C - 3-UTRSNV 7/7 -
10-54526206-C-T MBL2 c.*1691G>A - 3-UTRSNV 4/4 -
19-6668972-C-T TNFSF14 c.219+890G>A - IntronicSNV - 2/4
2-37346151-G-A EIF2AK2 c.1248+951C>T - IntronicSNV - 13/16
11-117869878-C-T IL10RA c.1259C>T p.Ser420Leu Missense 7/7 -
8-71506634-G-A TRAM1 c.570+107C>T - IntronicSNV - 6/10
10-54528266-G-C MBL2 c.378C>G p.Leu126Leu Synonymous 4/4 -
4-187004217-C-T TLR3 c.1377C>T p.Phe459Phe Synonymous 4/5 -
11-46334239-G-A CREB3L1 c.962+18G>A - IntronicSNV - 7/11
4-187004217-C-A TLR3 c.1377C>A p.Phe459Leu Missense 4/5 -
2-37373250-T-A EIF2AK2 c.240+746A>T - IntronicSNV - 4/16
1-65335095-T-C JAK1 c.546A>G p.Gly182Gly Synonymous 6/25 -
5-131819126-C-T IRF1 c.*517G>A - 3-UTRSNV 10/10 -
12-113348661-C-T OAS1 c.470-195C>T - IntronicSNV - 2/5
12-113386950-T-C OAS3 c.1314T>C p.Ile438Ile Synonymous 6/16 -
9-5468257-G-C CD274 c.*395G>C - 3-UTRSNV 7/7 -
12-68550815-T-C IFNG c.366+878A>G - IntronicSNV - 3/3
1-65342505-A-C JAK1 c.329+2203T>G - IntronicSNV - 4/24
19-7832664-T-C CLEC4M c.1049+150T>C - IntronicSNV - 6/6
19-7833690-G-T CLEC4M c.1050-34G>T - IntronicSNV - 6/6
2-37376291-G-A EIF2AK2 c.-308C>T - 5_prime_UTR_variant 2/17 -
2-163167746-C-G IFIH1 c.454-303G>C - IntronicSNV - 1/15
10-91157159-T-C IFIT1 c.5+4685T>C - IntronicSNV - 1/1
9-5456587-C-G CD274 c.52+422C>G - IntronicSNV - 2/6
6-137519588-A-G IFNGR1 c.1050T>C p.Ser350Ser Synonymous 7/7 -
21-34723661-T-G IFNAR1 c.1144-1403T>G - IntronicSNV - 8/10
21-34723661-T-A IFNAR1 c.1144-1403T>A - IntronicSNV - 8/10
9-123681451-G-T TRAF1 c.228+4532C>A - IntronicSNV - 3/7
4-185553098-T-G CASP3 c.308-4A>C - IntronicSNV - 5/7
4-185548951-A-G CASP3 c.*1475T>C - 3-UTRSNV 8/8 -
1-65311262-G-A JAK1 c.2049C>T p.Ser683Ser Synonymous 15/25 -
5-131820997-G-T IRF1 c.717+362C>A - IntronicSNV - 8/9
20-44757213-A-G CD40 c.675+216A>G - IntronicSNV - 8/8
21-45656774-C-T ICOSLG c.382G>A p.Val128Ile Missense 3/7 -
12-113403684-C-T OAS3 c.2539C>T p.Leu847Leu Synonymous 12/16 -
10-90771829-T-C FAS c.642T>C p.Thr214Thr Synonymous 7/9 -
19-7807482-T-A CD209 c.*443A>T - 3-UTRSNV 7/7 -
19-7805128-G-A CD209 c.*2797C>T - 3-UTRSNV 7/7 -
12-121458400-C-T OASL c.1509G>A p.Ser503Ser Synonymous 6/6 -
21-34715699-G-C IFNAR1 c.502G>C p.Val168Leu Missense 4/11 -
11-36530743-G-A TRAF6 c.-116+855C>T - intron_variant - 1/7
4-103458877-G-A NFKB1 c.160-138G>A - IntronicSNV - 4/23
19-7807610-A-G CD209 c.*315T>C - 3-UTRSNV 7/7 -
8-71514871-G-A TRAM1 c.124-2554C>T - IntronicSNV - 1/10
11-76077320-A-C THAP12 c.90-304T>G - IntronicSNV - 1/4
X-12903659-A-C TLR7 c.32A>C p.Gln11Pro Missense 3/3 -
X-12903659-A-T TLR7 c.32A>T p.Gln11Leu Missense 3/3 -
8-71506634-G-C TRAM1 c.570+107C>G - IntronicSNV - 6/10
11-616865-G-A CDHR5 c.*486C>T - 3-UTRSNV 15/15 -
11-117869670-A-G IL10RA c.1051A>G p.Arg351Gly Missense 7/7 -
2-204824652-G-A ICOS c.*330G>A - 3-UTRSNV 5/5 -
8-39785321-G-A IDO1 c.857-28G>A - IntronicSNV - 9/9
4-103514741-T-G NFKB1 c.1210+16T>G - IntronicSNV - 12/23
4-103514741-T-A NFKB1 c.1210+16T>A - IntronicSNV - 12/23
4-103514741-T-C NFKB1 c.1210+16T>C - IntronicSNV - 12/23
12-44180295-G-A IRAK4 c.1282G>A p.Ala428Thr Missense 12/13 -
2-204735861-G-A CTLA4 c.457+205G>A - IntronicSNV - 2/3
1-182551337-A-C RNASEL c.1623T>G p.Asp541Glu Missense 4/7 -
3-157162127-T-A VEPH1 c.529+15843A>T - IntronicSNV - 4/13
11-2410941-C-T CD81 c.67-701C>T - IntronicSNV - 1/7
10-91066460-T-A IFIT2 c.747T>A p.Val249Val Synonymous 2/2 -
11-46308549-C-T CREB3L1 c.102+8785C>T - IntronicSNV - 1/11
9-5569860-T-A PDCD1LG2 c.817-94T>A - IntronicSNV - 6/6
21-34698924-A-T IFNAR1 c.76+1488A>T - IntronicSNV - 1/10
2-242793559-T-C PDCD1 c.628-110A>G - IntronicSNV - 4/4
1-182543331-A-G RNASEL c.*1196T>C - 3-UTRSNV 7/7 -
21-42807740-A-T MX1 c.106-24A>T - IntronicSNV - 7/18
21-42812891-C-T MX1 c.669C>T p.Ile223Ile Synonymous 11/19 -
1-65307409-G-T JAK1 c.2404-125C>A - IntronicSNV - 17/24
11-117868517-A-G IL10RA c.811-913A>G - IntronicSNV - 6/6
11-76087399-T-C THAP12 c.89+4393A>G - IntronicSNV - 1/4
X-12906030-G-A TLR7 c.2403G>A p.Thr801Thr Synonymous 3/3 -
1-182554557-C-T RNASEL c.1385G>A p.Arg462Gln Missense 2/7 -
11-36530743-G-C TRAF6 c.-116+855C>G - intron_variant - 1/7
5-131820997-G-A IRF1 c.717+362C>T - IntronicSNV - 8/9
1-65307409-G-A JAK1 c.2404-125C>T - IntronicSNV - 17/24
1-206941529-T-C IL10 c.*452A>G - 3-UTRSNV 5/5 -
5-54404057-C-T GZMA c.462C>T p.Gly154Gly Synonymous 4/5 -
5-54404057-C-G GZMA c.462C>G p.Gly154Gly Synonymous 4/5 -
5-54404057-C-A GZMA c.462C>A p.Gly154Gly Synonymous 4/5 -
1-65305877-G-A JAK1 c.2650-399C>T - IntronicSNV - 19/24
12-64850978-G-A TBK1 c.87+1241G>A - IntronicSNV - 2/20
11-76077320-A-G THAP12 c.90-304T>C - IntronicSNV - 1/4
12-121476423-A-G OASL c.198+154T>C - IntronicSNV - 1/5
2-37355534-A-G EIF2AK2 c.786-1980T>C - IntronicSNV - 10/16
11-46309968-G-A CREB3L1 c.102+10204G>A - IntronicSNV - 1/11
9-21077716-G-A IFNB1 c.153C>T p.Tyr51Tyr Synonymous 1/1 -
11-70053487-C-T FADD c.*908C>T - 3-UTRSNV 2/2 -
12-113424893-C-A OAS2 c.228C>A p.Thr76Thr Synonymous 2/2 -
10-91065949-A-T IFIT2 c.236A>T p.Glu79Val Missense 2/2 -
10-54529480-G-A MBL2 c.305-405C>T - IntronicSNV - 2/3
10-91066075-A-G IFIT2 c.362A>G p.Lys121Arg Missense 2/2 -
11-126162468-G-A TIRAP c.164G>A p.Ser55Asn Missense 5/5 -
11-117864063-A-G IL10RA c.475A>G p.Ser159Gly Missense 4/7 -
21-42817930-G-A MX1 c.1135G>A p.Val379Ile Missense 15/19 -
4-186997767-C-A TLR3 c.1-7C>A - 5-UTRSNV 2/5 -
11-117863829-T-C IL10RA c.368-127T>C - IntronicSNV - 3/6
8-71518371-G-A TRAM1 c.123+1941C>T - IntronicSNV - 1/10
19-7831226-A-G CLEC4M c.784+133A>G - IntronicSNV - 4/6
19-7831226-A-T CLEC4M c.784+133A>T - IntronicSNV - 4/6
21-42826551-G-A MX1 c.1758+1755G>A - IntronicSNV - 18/18
20-44757407-G-A CD40 c.676-114G>A - IntronicSNV - 8/8
20-44757407-G-C CD40 c.676-114G>C - IntronicSNV - 8/8
X-12889763-T-G TLR7 c.3+4063T>G - IntronicSNV - 2/2
1-65315298-C-T JAK1 c.1755+1189G>A - IntronicSNV - 12/24
19-7832286-C-G CLEC4M c.937-116C>G - IntronicSNV - 5/6
3-46414162-C-T CCR5 c.1-232C>T - IntronicSNV 2/3 -
21-42821113-T-C MX1 c.1323T>C p.Arg441Arg Synonymous 16/19 -
9-123671520-G-A TRAF1 c.1020C>T p.Pro340Pro Synonymous 7/8 -
5-131819921-C-A IRF1 c.853+133G>T - IntronicSNV - 9/9
5-131819921-C-T IRF1 c.853+133G>A - IntronicSNV - 9/9
2-204594512-T-C CD28 c.534+17T>C - IntronicSNV - 3/3
11-46313891-C-A CREB3L1 c.103-7595C>A - IntronicSNV - 1/11
1-65349608-A-G JAK1 c.7-450T>C - IntronicSNV - 2/24
10-91161355-T-C IFIT1 c.6-683T>C - IntronicSNV - 1/1
12-64867338-C-G TBK1 c.541-672C>G - IntronicSNV - 5/20
21-42824661-A-G MX1 c.1623A>G p.Ala541Ala Synonymous 18/19 -
1-206941864-A-G IL10 c.*117T>C - 3-UTRSNV 5/5 -
12-56740682-C-G STAT2 c.1782G>C p.Met594Ile Missense 20/24 -
X-12901562-G-A TLR7 c.4-2069G>A - IntronicSNV - 2/2
14-25101589-G-C GZMB c.280C>G p.Pro94Ala Missense 3/5 -
12-44174204-G-C IRAK4 c.942-1906G>C - IntronicSNV - 9/12
12-113385918-C-G OAS3 c.1029+14C>G - IntronicSNV - 5/15
X-12890453-C-T TLR7 c.3+4753C>T - IntronicSNV - 2/2
21-42811395-C-T MX1 c.437-226C>T - IntronicSNV - 9/18
14-25100282-A-G GZMB c.739T>C p.Tyr247His Missense 5/5 -
12-113409970-C-T OAS3 c.*2192C>T - 3-UTRSNV 16/16 -
21-45647202-C-T ICOSLG c.*1715G>A - 3-UTRSNV 7/7 -
9-5465732-G-A CD274 c.790+126G>A - IntronicSNV - 5/6
12-113408997-G-T OAS3 c.*1219G>T - 3-UTRSNV 16/16 -
17-34416537-G-A CCL3 c.180C>T p.Pro60Pro Synonymous 2/3 -
10-54526622-A-G MBL2 c.*1275T>C - 3-UTRSNV 4/4 -
12-113376388-G-T OAS3 c.53G>T p.Arg18Met Missense 1/16 -
12-68551409-C-T IFNG c.366+284G>A - IntronicSNV - 3/3
12-113376388-G-C OAS3 c.53G>C p.Arg18Thr Missense 1/16 -
19-7834274-C-T CLEC4M c.*400C>T - 3-UTRSNV 7/7 -
19-7834274-C-G CLEC4M c.*400C>G - 3-UTRSNV 7/7 -
3-38184370-A-G MYD88 c.*1593A>G - 3-UTRSNV 5/5 -
2-204821494-C-T ICOS c.501+6C>T - IntronicSNV - 3/4
2-204821494-C-G ICOS c.501+6C>G - IntronicSNV - 3/4
10-54531099-C-G MBL2 c.187+110G>C - IntronicSNV - 1/3
10-54529325-A-G MBL2 c.305-250T>C - IntronicSNV - 2/3
10-54531099-C-T MBL2 c.187+110G>A - IntronicSNV - 1/3
1-65303659-C-T JAK1 c.3096G>A p.Lys1032Lys Synonymous 22/25 -
2-37353011-C-T EIF2AK2 c.908+421G>A - IntronicSNV - 11/16
2-163128824-T-C IFIH1 c.2528A>G p.His843Arg Missense 13/16 -
11-36523612-C-T TRAF6 c.-115-251G>A - intron_variant - 1/7
14-24631010-C-A IRF9 c.1-344C>A - IntronicSNV - 1/8
11-76087844-C-T THAP12 c.89+3948G>A - IntronicSNV - 1/4
12-113424893-C-T OAS2 c.228C>T p.Thr76Thr Synonymous 2/2 -
12-113424893-C-G OAS2 c.228C>G p.Thr76Thr Synonymous 2/2 -
1-117303400-C-T CD2 c.613+146C>T - IntronicSNV - 3/4
21-42824874-C-T MX1 c.1758+78C>T - IntronicSNV - 18/18
12-113345256-C-G OAS1 c.180+232C>G - IntronicSNV - 1/5
19-7833071-G-A CLEC4M c.1049+557G>A - IntronicSNV - 6/6
3-157159694-C-T PTX3 c.533-461C>T - IntronicSNV - 2/2
19-50167726-C-T IRF3 c.165+205G>A - IntronicSNV - 2/7
19-50167726-C-G IRF3 c.165+205G>C - IntronicSNV - 2/7
3-157154861-A-G PTX3 c.130+9A>G - IntronicSNV - 1/2
10-91162497-A-C IFIT1 c.465A>C p.Lys155Asn Missense 2/2 -
10-91162497-A-G IFIT1 c.465A>G p.Lys155Lys Synonymous 2/2 -
2-163154363-G-A IFIH1 c.770-4185C>T - IntronicSNV - 3/15
2-191867332-C-T STAT1 c.373-1443G>A - IntronicSNV - 5/24
4-187000321-G-C TLR3 c.633+136G>C - IntronicSNV - 3/4
3-119246404-A-C CD80 c.*214T>G - IntronicSNV 7/7 -
12-121471337-G-A OASL c.408C>T p.Leu136Leu Synonymous 2/6 -
11-117859209-G-A IL10RA c.180G>A p.Ala60Ala Synonymous 2/7 -
21-34712419-A-T IFNAR1 c.201-886A>T - IntronicSNV - 2/10
1-161484636-C-T FCGR2A c.777+914C>T - IntronicSNV - 6/6
X-135730555-T-C CD40LG c.148T>C p.Leu50Leu Synonymous 1/5 -
2-179312613-T-C PRKRA c.236-300A>G - IntronicSNV - 2/7
1-182549019-A-G RNASEL c.1905+1341T>C - IntronicSNV - 5/6
1-182549019-A-T RNASEL c.1905+1341T>A - IntronicSNV - 5/6
14-94582926-C-G IFI27 c.*62C>G - 3-UTRSNV 5/5 -
14-94582926-C-A IFI27 c.*62C>A - 3-UTRSNV 5/5 -