PMID: 22403240

Associations between incident ischemic stroke events and stroke and cardiovascular disease-related genome-wide association studies single nucleotide polymorphisms in the Population Architecture Using Genomics and Epidemiology study.

Circulation. Cardiovascular genetics

CL Carty, P Buzková, M Fornage, N Franceschini, S Cole, G Heiss, LA Hindorff, BV Howard, S Mann, LW Martin, Y Zhang, TC Matise, R Prentice, AP Reiner, C Kooperberg

2012-04-01

22 variants were identified in this publication

Variant ID	Gene	cDNA	Protein	Consequence	Exon	Intron
16-57004889-G-A	CETP	c.528-56G>A	-	IntronicSNV	-	5/15
19-11210912-C-T	LDLR	c.81C>T	p.Cys27Cys	Synonymous	2/18	-
6-20657564-A-G	CDKAL1	c.371+7956A>G	-	IntronicSNV	-	5/15
6-151252985-G-A	MTHFD1L	c.1257-4955G>A	-	IntronicSNV	-	11/27
19-11210912-C-G	LDLR	c.81C>G	p.Cys27Trp	Missense	2/18	-
19-11210912-C-A	LDLR	c.81C>A	p.Cys27*	Nonsense	2/18	-
19-11728802-A-G	ZNF627	c.*98A>G	-	3-UTRSNV	4/4	-
1-230294916-C-T	GALNT2	c.127-19048C>T	-	IntronicSNV	-	1/15
18-11987272-C-T	IMPA2	c.96+5508C>T	-	IntronicSNV	-	1/7
1-63049593-C-T	DOCK7	c.1801-668G>A	-	IntronicSNV	-	15/48
12-109895168-C-G	KCTD10	c.527+267G>C	-	IntronicSNV	-	5/6
15-67458639-T-C	SMAD3	c.533-478T>C	-	IntronicSNV	-	3/8
1-63049593-C-G	DOCK7	c.1801-668G>C	-	IntronicSNV	-	15/48
11-116619073-C-T	BUD13	c.*125G>A	-	3-UTRSNV	10/10	-
11-116619073-C-G	BUD13	c.*125G>C	-	3-UTRSNV	10/10	-
9-15289578-C-T	TTC39B	c.240+17504G>A	-	IntronicSNV	-	1/19
20-36399580-G-T	CTNNBL1	c.750+3134G>T	-	IntronicSNV	-	7/15
10-100205107-G-T	HPS1	c.-51C>A	-	5_prime_UTR_variant	2/20	-
5-74648603-A-T	HMGCR	c.1368+1176A>T	-	IntronicSNV	-	11/19
9-107647655-G-T	ABCA1	c.161-806C>A	-	IntronicSNV	-	3/49
20-44576502-T-C	PCIF1	c.*108T>C	-	3-UTRSNV	17/17	-
9-107647655-G-A	ABCA1	c.161-806C>T	-	IntronicSNV	-	3/49