PMID: 23101478

Single nucleotide polymorphisms (SNPs) involved in insulin resistance, weight regulation, lipid metabolism and inflammation in relation to metabolic syndrome: an epidemiological study.

Cardiovascular diabetology
CM Povel, JM Boer, NC Onland-Moret, ME Dollé, EJ Feskens, YT van der Schouw
2012-10-29

48 variants were identified in this publication


Variant ID Gene cDNA Protein Consequence Exon Intron
9-107664301-C-T ABCA1 c.66+1594G>A - IntronicSNV - 2/49
4-88030261-G-T AFF1 c.1512+794G>T - IntronicSNV - 10/19
7-72982874-C-T TBL2 c.*1963G>A - IntergenicSNV 7/7 -
9-107647655-G-A ABCA1 c.161-806C>T - IntronicSNV - 3/49
11-117531731-C-T DSCAML1 c.511+115775G>A - intron_variant - 3/32
16-67977382-T-C LCAT c.155-267A>G - IntronicSNV - 1/5
11-116653296-C-T ZPR1 c.1093-336G>A - IntronicSNV - 11/13
11-116653296-C-G ZPR1 c.1093-336G>C - IntronicSNV - 11/13
2-21232195-G-A APOB c.7545C>T p.Thr2515Thr Synonymous 26/29 -
6-50803050-A-G TFAP2B c.602-724A>G - IntronicSNV - 3/6
11-112023827-C-G IL18 c.91+488G>C - IntronicSNV - 3/5
18-58039276-C-T MC4R c.307G>A p.Val103Ile Missense 1/1 -
11-116652207-C-T ZPR1 c.1179+667G>A - IntronicSNV - 12/13
1-66102257-G-A LEPR c.3057G>A p.Pro1019Pro Synonymous 20/20 -
11-116652423-G-C ZPR1 c.1179+451C>G - IntronicSNV - 12/13
20-43042364-C-T HNF4A c.416C>T p.Thr139Ile Missense 4/10 -
20-44576502-T-C PCIF1 c.*108T>C - 3-UTRSNV 17/17 -
12-109895168-C-G KCTD10 c.527+267G>C - IntronicSNV - 5/6
11-116652423-G-A ZPR1 c.1179+451C>T - IntronicSNV - 12/13
11-116652423-G-T ZPR1 c.1179+451C>A - IntronicSNV - 12/13
16-67708897-A-G GFOD2 c.*161T>C - 3-UTRSNV 3/3 -
9-107647655-G-T ABCA1 c.161-806C>A - IntronicSNV - 3/49
1-230295691-G-A GALNT2 c.127-18273G>A - IntronicSNV - 1/15
2-21237544-G-T APOB c.3697-79C>A - IntronicSNV - 23/28
11-61604814-C-A FADS2 c.208-436C>A - IntronicSNV - 1/11
1-63049593-C-T DOCK7 c.1801-668G>A - IntronicSNV - 15/48
11-112022848-A-G IL18 c.91+1467T>C - IntronicSNV - 3/5
3-186560782-G-A ADIPOQ c.-9+244G>A - intron_variant - 1/2
1-154418879-C-T IL6R c.950-1722C>T - IntronicSNV - 6/9
1-63056112-G-A DOCK7 c.1683-3817C>T - IntronicSNV - 14/48
14-79945162-A-G NRXN3 c.429+11417A>G - IntronicSNV - 2/6
19-19789528-A-G ZNF101 c.131-7A>G - IntronicSNV - 2/3
2-21237544-G-A APOB c.3697-79C>T - IntronicSNV - 23/28
1-63049593-C-G DOCK7 c.1801-668G>C - IntronicSNV - 15/48
16-68024995-G-A DPEP2 c.732+23C>T - IntronicSNV - 6/10
11-61571348-C-G FADS1 c.1054-109G>C - IntronicSNV - 7/11
5-53300662-A-G ARL15 c.462+108370T>C - IntronicSNV - 4/4
20-44536932-G-A PLTP c.486-389C>T - IntronicSNV - 5/15
7-73026378-C-T MLXIPL c.400+4023G>A - IntronicSNV - 2/16
7-73026378-C-A MLXIPL c.400+4023G>T - IntronicSNV - 2/16
4-88023299-A-G AFF1 c.1263-3481A>G - IntronicSNV - 7/19
12-121420807-G-A HNF1A c.326+3910G>A - IntronicSNV - 1/9
11-61571348-C-T FADS1 c.1054-109G>A - IntronicSNV - 7/11
1-66089782-C-T LEPR c.2673+1118C>T - IntronicSNV - 19/19
12-109893156-A-T KCTD10 c.723+767T>A - IntronicSNV - 6/6
12-109893156-A-G KCTD10 c.723+767T>C - IntronicSNV - 6/6
8-19819439-A-G LPL c.1323-187A>G - IntronicSNV - 8/9
11-116732512-G-T SIK3 c.2171+45C>A - intron_variant - 17/23