PMID: 23799899

Impact of HDL genetic risk scores on coronary artery calcified plaque and mortality in individuals with type 2 diabetes from the Diabetes Heart Study.

Cardiovascular diabetology
LM Raffield, AJ Cox, FC Hsu, MC Ng, CD Langefeld, JJ Carr, BI Freedman, DW Bowden
2013-06-25

22 variants were identified in this publication


Variant ID Gene cDNA Protein Consequence Exon Intron
20-42904315-C-T GDAP1L1 c.761-3282C>T - IntronicSNV - 5/5
16-67928042-G-A PSKH1 c.-71+768G>A - intron_variant - 1/2
12-125265689-C-T SCARB1 c.*1540G>A - IntronicSNV 13/13 -
11-61570783-T-C FADS1 c.1248+52A>G - IntronicSNV - 9/11
9-15289578-C-T TTC39B c.240+17504G>A - IntronicSNV - 1/19
12-110000193-C-G MMAB c.349-536G>C - IntronicSNV - 4/8
12-123796238-C-T SBNO1 c.3218-562G>A - IntronicSNV - 24/31
17-37810218-C-G STARD3 c.219+215C>G - IntronicSNV - 2/14
8-116599199-T-G TRPS1 c.2700+29A>C - IntronicSNV - 5/6
8-116599199-T-C TRPS1 c.2700+29A>G - IntronicSNV - 5/6
19-8433196-C-A ANGPTL4 c.548-907C>A - IntronicSNV - 3/6
19-11347493-T-C DOCK6 c.2136A>G p.Thr712Thr Synonymous 19/48 -
11-116652423-G-C ZPR1 c.1179+451C>G - IntronicSNV - 12/13
12-110000193-C-T MMAB c.349-536G>A - IntronicSNV - 4/8
7-72982874-C-T TBL2 c.*1963G>A - IntergenicSNV 7/7 -
9-107647655-G-A ABCA1 c.161-806C>T - IntronicSNV - 3/49
11-116652423-G-A ZPR1 c.1179+451C>T - IntronicSNV - 12/13
11-116652423-G-T ZPR1 c.1179+451C>A - IntronicSNV - 12/13
12-109895168-C-G KCTD10 c.527+267G>C - IntronicSNV - 5/6
9-107647655-G-T ABCA1 c.161-806C>A - IntronicSNV - 3/49
1-230295691-G-A GALNT2 c.127-18273G>A - IntronicSNV - 1/15
17-76377482-T-G PGS1 c.143+2593T>G - IntronicSNV - 1/9