PMID: 27257688

Distinct Patterns of Association of Variants at 11q23.3 Chromosomal Region with Coronary Artery Disease and Dyslipidemia in the Population of Andhra Pradesh, India.

PloS one
R Pranav Chand, AS Kumar, K Anuj, S Vishnupriya, B Mohan Reddy
2016

71 variants were identified in this publication


Variant ID Gene cDNA Protein Consequence Exon Intron
11-116624703-G-T BUD13 c.1766+3159C>A - IntronicSNV - 9/9
11-116706952-C-G APOA1 c.376G>C p.Asp126His Missense 4/4 -
11-116625332-T-C BUD13 c.1766+2530A>G - IntronicSNV - 9/9
11-116631391-T-C BUD13 c.1254+60A>G - IntronicSNV - 5/9
11-116693163-A-G APOA4 c.176+212T>C - IntronicSNV - 2/2
11-116721826-C-T SIK3 c.3512-1827G>A - intron_variant - 20/23
11-116639104-A-G BUD13 c.237+1741T>C - IntronicSNV - 2/9
11-116662407-G-C APOA5 c.56C>G p.Ser19Trp Missense 3/4 -
11-116662407-G-A APOA5 c.56C>T p.Ser19Leu Missense 3/4 -
11-116633947-G-A BUD13 c.358C>T p.Arg120Cys Missense 4/10 -
11-116661826-T-C APOA5 c.162-43A>G - IntronicSNV - 3/3
11-116639104-A-T BUD13 c.237+1741T>A - IntronicSNV - 2/9
11-116706936-T-A APOA1 c.392A>T p.Lys131Met Missense 4/4 -
11-116635784-A-G BUD13 c.322+294T>C - IntronicSNV - 3/9
11-116631707-T-C BUD13 c.1037-39A>G - IntronicSNV - 4/9
11-116631707-T-A BUD13 c.1037-39A>T - IntronicSNV - 4/9
11-116619073-C-G BUD13 c.*125G>C - 3-UTRSNV 10/10 -
11-116707684-A-C APOA1 c.200+33T>G - IntronicSNV - 3/3
11-116707684-A-G APOA1 c.200+33T>C - IntronicSNV - 3/3
11-116619073-C-T BUD13 c.*125G>A - 3-UTRSNV 10/10 -
11-116626258-G-A BUD13 c.1766+1604C>T - IntronicSNV - 9/9
11-116741572-A-C SIK3 c.1738-455T>G - intron_variant - 13/23
11-116662579-C-T APOA5 c.1-3G>A - 5-UTRSNV 2/4 -
11-116620256-C-A BUD13 c.1767-965G>T - IntronicSNV - 9/9
11-116629153-G-A BUD13 c.1361-30C>T - IntronicSNV - 6/9
11-116652423-G-T ZPR1 c.1179+451C>A - IntronicSNV - 12/13
11-116652423-G-C ZPR1 c.1179+451C>G - IntronicSNV - 12/13
11-116652423-G-A ZPR1 c.1179+451C>T - IntronicSNV - 12/13
11-116651463-T-G ZPR1 c.1180-910A>C - IntronicSNV - 12/13
11-116640368-A-G BUD13 c.237+477T>C - IntronicSNV - 2/9
11-116660813-G-A APOA5 c.*31C>T - 3-UTRSNV 4/4 -
11-116654159-A-G ZPR1 c.981+87T>C - IntronicSNV - 10/13
11-116649135-G-A ZPR1 c.*506C>T - IntergenicSNV 14/14 -
11-116702778-C-A APOC3 c.180-702C>A - IntronicSNV - 3/3
11-116642137-C-T BUD13 c.144-1199G>A - IntronicSNV - 1/9
11-116662785-G-A APOA5 c.1-209C>T - IntronicSNV - 1/3
11-116639941-A-G BUD13 c.237+904T>C - IntronicSNV - 2/9
11-116703640-G-C APOC3 c.*40G>C - 3-UTRSNV 4/4 -
11-116658122-G-T ZPR1 c.333+76C>A - IntronicSNV - 2/13
11-116654435-C-T ZPR1 c.892-100G>A - IntronicSNV - 9/13
11-116632500-C-T BUD13 c.1036+769G>A - IntronicSNV - 4/9
11-116620693-C-T BUD13 c.1767-1402G>A - IntronicSNV - 9/9
11-116707583-A-G APOA1 c.200+134T>C - IntronicSNV - 3/3
11-116645149-A-G ZPR1 c.*4492T>C - IntergenicSNV 14/14 -
11-116629949-C-T BUD13 c.1255-54G>A - IntronicSNV - 5/9
11-116702778-C-T APOC3 c.180-702C>T - IntronicSNV - 3/3
11-116651463-T-A ZPR1 c.1180-910A>T - IntronicSNV - 12/13
11-116649511-G-A ZPR1 c.*130C>T - 3-UTRSNV 14/14 -
11-116650118-C-T ZPR1 c.1246-343G>A - IntronicSNV - 13/13
11-116661392-C-A APOA5 c.553G>T p.Gly185Cys Missense 4/4 -
11-116639692-C-T BUD13 c.237+1153G>A - IntronicSNV - 2/9
11-116653296-C-G ZPR1 c.1093-336G>C - IntronicSNV - 11/13
11-116691634-C-A APOA4 c.1140G>T p.Gln380His Missense 3/3 -
11-116628401-T-C BUD13 c.1684+81A>G - IntronicSNV - 8/9
11-116657561-C-T ZPR1 c.424+124G>A - IntronicSNV - 3/13
11-116621963-T-G BUD13 c.1767-2672A>C - IntronicSNV - 9/9
11-116619051-G-A BUD13 c.*147C>T - 3-UTRSNV 10/10 -
11-116653296-C-T ZPR1 c.1093-336G>A - IntronicSNV - 11/13
11-116652207-C-T ZPR1 c.1179+667G>A - IntronicSNV - 12/13
11-116707401-G-A APOA1 c.201-274C>T - IntronicSNV - 3/3
11-116630600-C-T BUD13 c.1255-705G>A - IntronicSNV - 5/9
11-116631690-G-A BUD13 c.1037-22C>T - IntronicSNV - 4/9
11-116633825-C-A BUD13 c.480G>T p.Pro160Pro Synonymous 4/10 -
11-116633862-G-A BUD13 c.443C>T p.Pro148Leu Missense 4/10 -
11-116660686-G-A APOA5 c.*158C>T - 3-UTRSNV 4/4 -
11-116652301-C-T ZPR1 c.1179+573G>A - IntronicSNV - 12/13
11-116639941-A-T BUD13 c.237+904T>A - IntronicSNV - 2/9
11-116633825-C-T BUD13 c.480G>A p.Pro160Pro Synonymous 4/10 -
11-116634557-T-C BUD13 c.323-575A>G - IntronicSNV - 3/9
11-116621770-G-A BUD13 c.1767-2479C>T - IntronicSNV - 9/9
11-116694005-C-T APOA4 c.1-98G>A - 5-UTRSNV 1/3 -