PMID: 29203833

Bayesian analysis of genome-wide inflammatory bowel disease data sets reveals new risk loci.

European journal of human genetics : EJHG
Y Zhang, L Tian, P Sleiman, S Ghosh, H Hakonarson,
2018-02

29 variants were identified in this publication


Variant ID Gene cDNA Protein Consequence Exon Intron
13-42857280-C-T AKAP11 c.-99-2842C>T - intron_variant - 1/12
6-33047031-T-C HLA-DPB1 c.101-1418T>C - IntronicSNV - 1/5
1-155162067-C-A MUC1 c.66G>T p.Thr22Thr Synonymous 2/8 -
1-155162067-C-T MUC1 c.66G>A p.Thr22Thr Synonymous 2/8 -
9-244457-G-A DOCK8 c.54-27170G>A - IntronicSNV - 1/47
2-43458611-T-C THADA c.5467-129A>G - IntronicSNV - 37/37
16-11092478-G-A CLEC16A c.1072-4453G>A - IntronicSNV - 10/23
9-244457-G-T DOCK8 c.54-27170G>T - IntronicSNV - 1/47
16-11044933-A-G CLEC16A c.80+6279A>G - IntronicSNV - 1/23
13-42882620-C-T AKAP11 c.5148C>T p.Thr1716Thr Synonymous 9/13 -
16-10971474-A-G CIITA c.52+235A>G - IntronicSNV - 1/19
13-42870531-A-T AKAP11 c.216+653A>T - IntronicSNV - 5/12
13-42870531-A-G AKAP11 c.216+653A>G - IntronicSNV - 5/12
3-49721532-G-A MST1 c.2107C>T p.Arg703Cys Missense 18/18 -
16-11044933-A-T CLEC16A c.80+6279A>T - IntronicSNV - 1/23
2-25500905-C-A DNMT3A c.449-2493G>T - IntronicSNV - 4/22
16-11041333-G-A CLEC16A c.80+2679G>A - IntronicSNV - 1/23
20-39908689-C-T ZHX3 c.-244-10966G>A - intron_variant - 1/3
6-31915614-G-A CFB c.754G>A p.Gly252Ser Missense 5/18 -
1-155206341-T-G GBA c.1000-81A>C - IntronicSNV - 7/10
6-31915614-G-T CFB c.754G>T p.Gly252Cys Missense 5/18 -
16-11063567-G-A CLEC16A c.492+401G>A - IntronicSNV - 4/23
3-49537839-C-G DAG1 c.-117+7433C>G - intron_variant - 4/5
16-11092478-G-C CLEC16A c.1072-4453G>C - IntronicSNV - 10/23
3-57771722-A-G SLMAP c.198+28146A>G - IntronicSNV - 1/20
2-25502552-T-G DNMT3A c.448+2758A>C - IntronicSNV - 4/22
16-11061444-G-A CLEC16A c.344-1574G>A - IntronicSNV - 3/23
16-11064026-T-C CLEC16A c.492+860T>C - IntronicSNV - 4/23
13-42862423-C-T AKAP11 c.51+1888C>T - IntronicSNV - 3/12