PTPN22 c.828+186G>A

Variant ID: 1-114394463-C-T

NM_015967.5(PTPN22):c.828+186G>A

This variant was identified in 15 publications

View GRCh38 version.




Publications:


Genetic association between the PTPN22, IRF5 and TYK2 gene variants and susceptibility to juvenile idiopathic arthritis.

Experimental And Therapeutic Medicine
Qian, Yufeng Y; Chen, Bingqian B; Wang, Zhengfei Z; Peng, Yuqin Y
Publication Date: 2022-12

Variant appearance in text: rs3765598
PubMed Link: 36605568
Variant Present in the following documents:
  • Main text
  • etm-24-06-11692.pdf
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Genetic Polymorphism of PTPN22 in Autoimmune Diseases: A Comprehensive Review.

Medicina (Kaunas, Lithuania)
Tizaoui, Kalthoum K; Shin, Jae Il JI; Jeong, Gwang Hun GH; Yang, Jae Won JW; Park, Seoyeon S; Kim, Ji Hong JH; Hwang, Soo Young SY; Park, Se Jin SJ; Koyanagi, Ai A; Smith, Lee L
Publication Date: 2022-08-02

Variant appearance in text: rs3765598
PubMed Link: 36013501
Variant Present in the following documents:
  • Main text
  • medicina-58-01034.pdf
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Characterization of Rheumatoid Arthritis Risk-Associated SNPs and Identification of Novel Therapeutic Sites Using an In-Silico Approach.

Biology
Akhtar, Mehran M; Ali, Yasir Y; Islam, Zia-Ul ZU; Arshad, Maria M; Rauf, Mamoona M; Ali, Muhammad M; Maodaa, Saleh N SN; Al-Farraj, Saleh A SA; El-Serehy, Hamed A HA; Jalil, Fazal F
Publication Date: 2021-06-04

Variant appearance in text: rs3765598
PubMed Link: 34199962
Variant Present in the following documents:
  • Main text
  • biology-10-00501.pdf
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Non-receptor tyrosine kinase signaling in autoimmunity and therapeutic implications.

Pharmacology & Therapeutics
Solouki, Sabrina S; August, Avery A; Huang, Weishan W
Publication Date: 2019-09

Variant appearance in text: rs3765598
PubMed Link: 31082431
Variant Present in the following documents:
  • Main text
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Psoriasis risk SNPs and their association with HIV-1 control.

Human Immunology
Nititham, Joanne J; Gupta, Rashmi R; Zeng, Xue X; Hartogensis, Wendy W; Nixon, Douglas F DF; Deeks, Steven G SG; Hecht, Frederick M FM; Liao, Wilson W
Publication Date: 2017-02

Variant appearance in text: rs3765598
PubMed Link: 27810495
Variant Present in the following documents:
  • Main text
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Genetic Association of PTPN22 Polymorphisms with Autoimmune Hepatitis and Primary Biliary Cholangitis in Japan.

Scientific Reports
Umemura, Takeji T; Joshita, Satoru S; Yamazaki, Tomoo T; Komatsu, Michiharu M; Katsuyama, Yoshihiko Y; Yoshizawa, Kaname K; Tanaka, Eiji E; Ota, Masao M
Publication Date: 2016-07-11

Variant appearance in text: rs3765598
PubMed Link: 27406031
Variant Present in the following documents:
  • Main text
View BVdb publication page



ERBB3-rs2292239 as primary type 1 diabetes association locus among non-HLA genes in Chinese.

Meta Gene
Sun, Chengjun C; Wei, Haiyan H; Chen, Xiuli X; Zhao, Zhuhui Z; Du, Hongwei H; Song, Wenhui W; Yang, Yu Y; Zhang, Miaoying M; Lu, Wei W; Pei, Zhou Z; Xi, Li L; Yan, Jian J; Zhi, Dijing D; Cheng, Ruoqian R; Luo, Feihong F
Publication Date: 2016-09

Variant appearance in text: rs3765598
PubMed Link: 27331016
Variant Present in the following documents:
  • Main text
  • main.pdf
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Association of rheumatoid arthritis susceptibility gene with lipid profiles in patients with rheumatoid arthritis.

Rheumatology (Oxford, England)
Davis, Lisa A LA; Whitfield, Emily E; Cannon, Grant W GW; Wolff, Roger K RK; Johnson, Dannette S DS; Reimold, Andreas M AM; Kerr, Gail S GS; Richards, J Steuart JS; Mikuls, Ted R TR; Caplan, Liron L
Publication Date: 2014-06

Variant appearance in text: rs3765598
PubMed Link: 24489016
Variant Present in the following documents:
  • Main text
View BVdb publication page



PTPN22 association in systemic lupus erythematosus (SLE) with respect to individual ancestry and clinical sub-phenotypes.

Plos One
Namjou, Bahram B; Kim-Howard, Xana X; Sun, Celi C; Adler, Adam A; Chung, Sharon A SA; Kaufman, Kenneth M KM; Kelly, Jennifer A JA; Glenn, Stuart B SB; Guthridge, Joel M JM; Scofield, Robert H RH; Kimberly, Robert P RP; Brown, Elizabeth E EE; Alarcón, Graciela S GS; Edberg, Jeffrey C JC; Kim, Jae-Hoon JH; Choi, Jiyoung J; Ramsey-Goldman, Rosalind R; Petri, Michelle A MA; Reveille, John D JD; Vilá, Luis M LM; Boackle, Susan A SA; Freedman, Barry I BI; Tsao, Betty P BP; Langefeld, Carl D CD; Vyse, Timothy J TJ; Jacob, Chaim O CO; Pons-Estel, Bernardo B; , ; Niewold, Timothy B TB; Moser Sivils, Kathy L KL; Merrill, Joan T JT; Anaya, Juan-Manuel JM; Gilkeson, Gary S GS; Gaffney, Patrick M PM; Bae, Sang-Cheol SC; Alarcón-Riquelme, Marta E ME; , ; Harley, John B JB; Criswell, Lindsey A LA; James, Judith A JA; Nath, Swapan K SK
Publication Date: 2013

Variant appearance in text: rs3765598
PubMed Link: 23950893
Variant Present in the following documents:
  • Main text
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Different genetic associations of the IgE production among fetus, infancy and childhood.

Plos One
Chang, Jen-Chieh JC; Kuo, Ho-Chang HC; Hsu, Te-Yao TY; Ou, Chia-Yu CY; Liu, Chieh-An CA; Chuang, Hau H; Liang, Hsiu-Mei HM; Huang, Hurng-Wern HW; Yang, Kuender D KD
Publication Date: 2013

Variant appearance in text: rs3765598
PubMed Link: 23936416
Variant Present in the following documents:
  • Main text
  • pone.0070362.pdf
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Gene- or region-based association study via kernel principal component analysis.

Bmc Genetics
Gao, Qingsong Q; He, Yungang Y; Yuan, Zhongshang Z; Zhao, Jinghua J; Zhang, Bingbing B; Xue, Fuzhong F
Publication Date: 2011-08-26

Variant appearance in text: rs3765598
PubMed Link: 21871061
Variant Present in the following documents:
  • Main text
  • 1471-2156-12-75.pdf
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Overview of the Rapid Response data.

Genes And Immunity
Brown, W M WM; Pierce, J J JJ; Hilner, J E JE; Perdue, L H LH; Lohman, K K; Lu, L L; de Bakker, P I W PI; Irenze, K K; Ziaugra, L L; Mirel, D B DB; ,
Publication Date: 2009-12

Variant appearance in text: rs3765598
PubMed Link: 19956101
Variant Present in the following documents:
  • Main text
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rs2476601 T allele (R620W) defines high-risk PTPN22 type I diabetes-associated haplotypes with preliminary evidence for an additional protective haplotype.

Genes And Immunity
Steck, A K AK; Baschal, E E EE; Jasinski, J M JM; Boehm, B O BO; Bottini, N N; Concannon, P P; Julier, C C; Morahan, G G; Noble, J A JA; Polychronakos, C C; She, J X JX; Eisenbarth, G S GS; ,
Publication Date: 2009-12

Variant appearance in text: rs3765598
PubMed Link: 19956096
Variant Present in the following documents:
  • Main text
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Genetic risk factors for rheumatoid arthritis differ in Caucasian and Korean populations.

Arthritis And Rheumatism
Lee, Hye-Soon HS; Korman, Benjamin D BD; Le, Julie M JM; Kastner, Daniel L DL; Remmers, Elaine F EF; Gregersen, Peter K PK; Bae, Sang-Cheol SC
Publication Date: 2009-02

Variant appearance in text: rs3765598
PubMed Link: 19180477
Variant Present in the following documents:
  • Main text
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PTPN22 genetic variation: evidence for multiple variants associated with rheumatoid arthritis.

American Journal Of Human Genetics
Carlton, Victoria E H VE; Hu, Xiaolan X; Chokkalingam, Anand P AP; Schrodi, Steven J SJ; Brandon, Rhonda R; Alexander, Heather C HC; Chang, Monica M; Catanese, Joseph J JJ; Leong, Diane U DU; Ardlie, Kristin G KG; Kastner, Daniel L DL; Seldin, Michael F MF; Criswell, Lindsey A LA; Gregersen, Peter K PK; Beasley, Ellen E; Thomson, Glenys G; Amos, Christopher I CI; Begovich, Ann B AB
Publication Date: 2005-10

Variant appearance in text: rs3765598
PubMed Link: 16175503
Variant Present in the following documents:
  • Main text
View BVdb publication page