Workflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues.
Nature Communications
Abelin, Jennifer G JG; Bergstrom, Erik J EJ; Rivera, Keith D KD; Taylor, Hannah B HB; Klaeger, Susan S; Xu, Charles C; Verzani, Eva K EK; Jackson White, C C; Woldemichael, Hilina B HB; Virshup, Maya M; Olive, Meagan E ME; Maynard, Myranda M; Vartany, Stephanie A SA; Allen, Joseph D JD; Phulphagar, Kshiti K; Harry Kane, M M; Rachimi, Suzanna S; Mani, D R DR; Gillette, Michael A MA; Satpathy, Shankha S; Clauser, Karl R KR; Udeshi, Namrata D ND; Carr, Steven A SA
Duffy blood system and G6PD genetic variants in vivax malaria patients from Manaus, Amazonas, Brazil.
Malaria Journal
Ferreira, Natália S NS; Mathias, Jéssica Lorena S JLS; Albuquerque, Sérgio Roberto L SRL; Almeida, Anne Cristine G ACG; Dantas, Ana C AC; Anselmo, Fernanda C FC; Lima, Emerson S ES; Lacerda, Marcus Vinicius G MVG; Nogueira, Paulo A PA; Ramasawmy, Rajendranath R; Gonçalves, Marilda S MS; Moura Neto, José P JP
Prioritization of candidate genes for a South African family with Parkinson's disease using in-silico tools.
Plos One
Sebate, Boiketlo B; Cuttler, Katelyn K; Cloete, Ruben R; Britz, Marcell M; Christoffels, Alan A; Williams, Monique M; Carr, Jonathan J; Bardien, Soraya S
Publication Date: 2021
Variant appearance in text: ACKR1: 125G>A; G42D; rs12075
Integrated genetic and metabolic landscapes predict vulnerabilities of temozolomide resistant glioblastoma cells.
Npj Systems Biology And Applications
Immanuel, Selva Rupa Christinal SRC; Ghanate, Avinash D AD; Parmar, Dharmeshkumar S DS; Yadav, Ritu R; Uthup, Riya R; Panchagnula, Venkateswarlu V; Raghunathan, Anu A
Duffy phenotyping and FY*B-67T/C genotyping as screening test for benign constitutional neutropenia.
Hematology, Transfusion And Cell Therapy
Barreto, Maria E S F MESF; Lipay, Mariana E ME; Santos, Leandro D LD; Sirianni, Marilia F Mascarenhas MFM; Costa, Thiago H TH; Castilho, Lilian L; Hamerschlak, Nelson N; Kutner, José M JM; Bub, Carolina B CB
ACKR1 Alleles at 5.6 kb in a Well-Characterized Renewable US Food and Drug Administration (FDA) Reference Panel for Standardization of Blood Group Genotyping.
The Journal Of Molecular Diagnostics : Jmd
Srivastava, Kshitij K; Khil, Pavel P PP; Sippert, Emilia E; Volkova, Evgeniya E; Dekker, John P JP; Rios, Maria M; Flegel, Willy A WA
Publication Date: 2020-10
Variant appearance in text: ACKR1: 125G>A; Gly42Asp; rs12075
Distinctive mutational spectrum and karyotype disruption in long-term cisplatin-treated urothelial carcinoma cell lines.
Scientific Reports
Skowron, Margaretha A MA; Petzsch, Patrick P; Hardt, Karin K; Wagner, Nicholas N; Beier, Manfred M; Stepanow, Stefanie S; Drechsler, Matthias M; Rieder, Harald H; Köhrer, Karl K; Niegisch, Günter G; Hoffmann, Michèle J MJ; Schulz, Wolfgang A WA
Organoids as a new model for improving regenerative medicine and cancer personalized therapy in renal diseases.
Cell Death & Disease
Grassi, Ludovica L; Alfonsi, Romina R; Francescangeli, Federica F; Signore, Michele M; De Angelis, Maria Laura ML; Addario, Antonio A; Costantini, Manuela M; Flex, Elisabetta E; Ciolfi, Andrea A; Pizzi, Simone S; Bruselles, Alessandro A; Pallocca, Matteo M; Simone, Giuseppe G; Haoui, Mustapha M; Falchi, Mario M; Milella, Michele M; Sentinelli, Steno S; Di Matteo, Paola P; Stellacci, Emilia E; Gallucci, Michele M; Muto, Giovanni G; Tartaglia, Marco M; De Maria, Ruggero R; Bonci, Désirée D
Publication Date: 2019-02-27
Variant appearance in text: ACKR1: 125G>A; rs12075
X-linked ADGRG2 mutation and obstructive azoospermia in a large Pakistani family.
Scientific Reports
Khan, Muhammad Jaseem MJ; Pollock, Nijole N; Jiang, Huaiyang H; Castro, Carlos C; Nazli, Rubina R; Ahmed, Jawad J; Basit, Sulman S; Rajkovic, Aleksandar A; Yatsenko, Alexander N AN
Three-dimensional modelling identifies novel genetic dependencies associated with breast cancer progression in the isogenic MCF10 model.
The Journal Of Pathology
Maguire, Sarah L SL; Peck, Barrie B; Wai, Patty T PT; Campbell, James J; Barker, Holly H; Gulati, Aditi A; Daley, Frances F; Vyse, Simon S; Huang, Paul P; Lord, Christopher J CJ; Farnie, Gillian G; Brennan, Keith K; Natrajan, Rachael R
Comprehensive red blood cell and platelet antigen prediction from whole genome sequencing: proof of principle.
Transfusion
Lane, William J WJ; Westhoff, Connie M CM; Uy, Jon Michael JM; Aguad, Maria M; Smeland-Wagman, Robin R; Kaufman, Richard M RM; Rehm, Heidi L HL; Green, Robert C RC; Silberstein, Leslie E LE; ,
Generation of a High Number of Healthy Erythroid Cells from Gene-Edited Pyruvate Kinase Deficiency Patient-Specific Induced Pluripotent Stem Cells.
Stem Cell Reports
Garate, Zita Z; Quintana-Bustamante, Oscar O; Crane, Ana M AM; Olivier, Emmanuel E; Poirot, Laurent L; Galetto, Roman R; Kosinski, Penelope P; Hill, Collin C; Kung, Charles C; Agirre, Xabi X; Orman, Israel I; Cerrato, Laura L; Alberquilla, Omaira O; Rodriguez-Fornes, Fatima F; Fusaki, Noemi N; Garcia-Sanchez, Felix F; Maia, Tabita M TM; Ribeiro, Maria L ML; Sevilla, Julian J; Prosper, Felipe F; Jin, Shengfang S; Mountford, Joanne J; Guenechea, Guillermo G; Gouble, Agnes A; Bueren, Juan A JA; Davis, Brian R BR; Segovia, Jose C JC
Whole-genome sequencing of the world's oldest people.
Plos One
Gierman, Hinco J HJ; Fortney, Kristen K; Roach, Jared C JC; Coles, Natalie S NS; Li, Hong H; Glusman, Gustavo G; Markov, Glenn J GJ; Smith, Justin D JD; Hood, Leroy L; Coles, L Stephen LS; Kim, Stuart K SK
A genome-wide association scan on the levels of markers of inflammation in Sardinians reveals associations that underpin its complex regulation.
Plos Genetics
Naitza, Silvia S; Porcu, Eleonora E; Steri, Maristella M; Taub, Dennis D DD; Mulas, Antonella A; Xiao, Xiang X; Strait, James J; Dei, Mariano M; Lai, Sandra S; Busonero, Fabio F; Maschio, Andrea A; Usala, Gianluca G; Zoledziewska, Magdalena M; Sidore, Carlo C; Zara, Ilenia I; Pitzalis, Maristella M; Loi, Alessia A; Virdis, Francesca F; Piras, Roberta R; Deidda, Francesca F; Whalen, Michael B MB; Crisponi, Laura L; Concas, Antonio A; Podda, Carlo C; Uzzau, Sergio S; Scheet, Paul P; Longo, Dan L DL; Lakatta, Edward E; Abecasis, Gonçalo R GR; Cao, Antonio A; Schlessinger, David D; Uda, Manuela M; Sanna, Serena S; Cucca, Francesco F
Publication Date: 2012-01
Variant appearance in text: DARC: Gly42Asp; rs12075
Genetic variants associated with the white blood cell count in 13,923 subjects in the eMERGE Network.
Human Genetics
Crosslin, David R DR; McDavid, Andrew A; Weston, Noah N; Nelson, Sarah C SC; Zheng, Xiuwen X; Hart, Eugene E; de Andrade, Mariza M; Kullo, Iftikhar J IJ; McCarty, Catherine A CA; Doheny, Kimberly F KF; Pugh, Elizabeth E; Kho, Abel A; Hayes, M Geoffrey MG; Pretel, Stephanie S; Saip, Alexander A; Ritchie, Marylyn D MD; Crawford, Dana C DC; Crane, Paul K PK; Newton, Katherine K; Li, Rongling R; Mirel, Daniel B DB; Crenshaw, Andrew A; Larson, Eric B EB; Carlson, Chris S CS; Jarvik, Gail P GP; ,
Howes, Rosalind E RE; Patil, Anand P AP; Piel, Frédéric B FB; Nyangiri, Oscar A OA; Kabaria, Caroline W CW; Gething, Peter W PW; Zimmerman, Peter A PA; Barnadas, Céline C; Beall, Cynthia M CM; Gebremedhin, Amha A; Ménard, Didier D; Williams, Thomas N TN; Weatherall, David J DJ; Hay, Simon I SI